RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 FRAS1Q86XX4 4008 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 IFITM5A6NNB3 132 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 FNDC10F2Z333 226 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 H0Y980 276 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 J3QRK9 145 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 PRH1P02810 166 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 CTXN2P0C2S0 81 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 HIST1H1DP16402 221 aaKnown RBP1.81□□□□□ -2.12
PTCD3-211ENST00000476215 LPAR6P43657 344 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 AQP4P55087 323 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 RPL30P62888 115 aaKnown RBP1.81□□□□□ -2.12
PTCD3-211ENST00000476215 MRPS15P82914 257 aaKnown RBP1.81□□□□□ -2.12
PTCD3-211ENST00000476215 RHOGP84095 191 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 RTL8BQ17RB0 113 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 KLK9Q2XQG4 91 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 DEFB114Q30KQ6 69 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 VMA21Q3ZAQ7 101 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 HACD4Q5VWC8 232 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 IDO2Q6ZQW0 420 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 GPHB5Q86YW7 130 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 MAFIPQ8WZ33 124 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 DNAJC30Q96LL9 226 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 TMEM56Q96MV1 263 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 FAM210AQ96ND0 272 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 GINS4Q9BRT9 223 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 DCUN1D5Q9BTE7 237 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 CCDC90BQ9GZT6 254 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 ATG5Q9H1Y0 275 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 DCSTAMPQ9H295 470 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 NDUFB11Q9NX14 153 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 COA4Q9NYJ1 87 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 KLK9Q9UKQ9 250 aa1.81□□□□□ -2.12
PTCD3-211ENST00000476215 RBM7Q9Y580 266 aaKnown RBP1.81□□□□□ -2.12
PTCD3-211ENST00000476215 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.8□□□□□ -2.12
PTCD3-211ENST00000476215 LCE6AA0A183 80 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 A0A1B0GW64 132 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 FAM223BA6NKX1 122 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 E7EUB6 86 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 MRPS14O60783 128 aaKnown RBP1.8□□□□□ -2.12
PTCD3-211ENST00000476215 CRYZL1O95825 349 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 IFNA6P05013 189 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 APELAP0DMC3 54 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 ORM2P19652 201 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 NFYAP23511 347 aaPredicted RBP1.8□□□□□ -2.12
PTCD3-211ENST00000476215 PSMB6P28072 239 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 SDC2P34741 201 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 CDK10Q15131 360 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 MSMO1Q15800 293 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 LINC00322Q6ZN03 302 aaPredicted RBP1.8□□□□□ -2.12
PTCD3-211ENST00000476215 FAM223AQ8IWN6 122 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 Q8N402 240 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 DEFB125Q8N687 156 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 TMEM167AQ8TBQ9 72 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 ACOT12Q8WYK0 555 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 CNBD2Q96M20 576 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 PHB2Q99623 299 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 VCX3BQ9H321 246 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 SMDT1Q9H4I9 107 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 SLC2A9Q9NRM0 540 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 TXNL4BQ9NX01 149 aaKnown RBP1.8□□□□□ -2.12
PTCD3-211ENST00000476215 PRELID3BQ9Y3B1 194 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 ALMS1Q8TCU4 4167 aa1.8□□□□□ -2.12
PTCD3-211ENST00000476215 TRBV7-1A0A0A6YYK4 115 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 TRAV3A0A0B4J244 114 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 TEX50A0A1B0GTY4 177 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 TMEM235A6NFC5 223 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 C2orf70A6NJV1 201 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 OR11H12B2RN74 326 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 PPP5D1E7EU14 171 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 CREBL2O60519 120 aaPredicted RBP1.79□□□□□ -2.12
PTCD3-211ENST00000476215 GGCTO75223 188 aaKnown RBP1.79□□□□□ -2.12
PTCD3-211ENST00000476215 S1PR2O95136 353 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 DHFRP00374 187 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 CD7P09564 240 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 SAA1P0DJI8 122 aaPredicted RBP1.79□□□□□ -2.12
PTCD3-211ENST00000476215 C8orf88P0DMB2 117 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 IGHV3-30-3P0DP02 117 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 HIST1H1BP16401 226 aaKnown RBP1.79□□□□□ -2.12
PTCD3-211ENST00000476215 CBLN1P23435 193 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 RPL27AP46776 148 aaKnown RBP1.79□□□□□ -2.12
PTCD3-211ENST00000476215 PSMB3P49720 205 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 GNG2P59768 71 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 DEFA5Q01523 94 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 SS18Q15532 418 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 USF2Q15853 346 aaPredicted RBP1.79□□□□□ -2.12
PTCD3-211ENST00000476215 MRPL51Q4U2R6 128 aaKnown RBP1.79□□□□□ -2.12
PTCD3-211ENST00000476215 C10orf55Q5SWW7 151 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 SFXN4Q6P4A7 337 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 IZUMO2Q6UXV1 221 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 OR5H6Q8NGV6 325 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 VSTM2AQ8TAG5 236 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 RNASEH2CQ8TDP1 164 aaKnown RBP1.79□□□□□ -2.12
PTCD3-211ENST00000476215 ISOC1Q96CN7 298 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 S100A16Q96FQ6 103 aaKnown RBP1.79□□□□□ -2.12
PTCD3-211ENST00000476215 TAS2R8Q9NYW2 309 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 SSR3Q9UNL2 185 aa1.79□□□□□ -2.12
PTCD3-211ENST00000476215 RYR1P21817 5038 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 PKD1P98161 4303 aa1.78□□□□□ -2.12
PTCD3-211ENST00000476215 FAT2Q9NYQ8 4349 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 233.5 ms