RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 CRXO43186 299 aaPredicted RBP11.45□□□□□ -0.58
RPUSD3-215ENST00000475470 CD28P10747 220 aa11.45□□□□□ -0.58
RPUSD3-215ENST00000475470 TSPOP30536 169 aa11.45□□□□□ -0.58
RPUSD3-215ENST00000475470 MAJINQ3KP22 176 aa11.45□□□□□ -0.58
RPUSD3-215ENST00000475470 SCRT2Q9NQ03 307 aa11.45□□□□□ -0.58
RPUSD3-215ENST00000475470 TRAV12-2A0A075B6T6 113 aa11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 RNASE3P12724 160 aaKnown RBP11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 GATA1P15976 413 aaPredicted RBP11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 CDKN1BP46527 198 aa11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 SPATA12Q7Z6I5 190 aa11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 TMEM61Q8N0U2 210 aa11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 RAX2Q96IS3 184 aa11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 SMR3AQ99954 134 aa11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 TMEM160Q9NX00 188 aa11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 C20orf202A1L168 122 aa11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 SPINK13Q1W4C9 94 aa11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 OR2K2Q8NGT1 345 aa11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 LINC01006Q8NI28 216 aa11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 C16orf95Q9H693 158 aa11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 GCN1Q92616 2671 aaKnown RBP11.44□□□□□ -0.58
RPUSD3-215ENST00000475470 AKAP9Q99996 3911 aa11.43□□□□□ -0.58
RPUSD3-215ENST00000475470 TRAV2A0A0B4J234 112 aa11.43□□□□□ -0.58
RPUSD3-215ENST00000475470 CD7P09564 240 aa11.43□□□□□ -0.58
RPUSD3-215ENST00000475470 DEFB131AP59861 70 aa11.43□□□□□ -0.58
RPUSD3-215ENST00000475470 NXT2Q9NPJ8 142 aaKnown RBP11.43□□□□□ -0.58
RPUSD3-215ENST00000475470 TRAV26-2A0A0B4J265 109 aa11.43□□□□□ -0.58
RPUSD3-215ENST00000475470 H0Y8G0 127 aa11.43□□□□□ -0.58
RPUSD3-215ENST00000475470 ZNF124Q15973 351 aa11.43□□□□□ -0.58
RPUSD3-215ENST00000475470 ZNF747Q9BV97 191 aa11.43□□□□□ -0.58
RPUSD3-215ENST00000475470 A0A096LNJ9 63 aa11.42□□□□□ -0.58
RPUSD3-215ENST00000475470 DEFB114Q30KQ6 69 aa11.42□□□□□ -0.58
RPUSD3-215ENST00000475470 PET117Q6UWS5 81 aa11.42□□□□□ -0.58
RPUSD3-215ENST00000475470 KNCNA6PVL3 124 aa11.41□□□□□ -0.58
RPUSD3-215ENST00000475470 CCL24O00175 119 aa11.41□□□□□ -0.58
RPUSD3-215ENST00000475470 HBDP02042 147 aa11.41□□□□□ -0.58
RPUSD3-215ENST00000475470 FXYD7P58549 80 aa11.41□□□□□ -0.58
RPUSD3-215ENST00000475470 HILS1P60008 231 aa11.41□□□□□ -0.58
RPUSD3-215ENST00000475470 C14orf178Q8N769 122 aaPredicted RBP11.41□□□□□ -0.58
RPUSD3-215ENST00000475470 MRAP2Q96G30 205 aa11.41□□□□□ -0.58
RPUSD3-215ENST00000475470 CITED2Q99967 270 aaPredicted RBP11.41□□□□□ -0.58
RPUSD3-215ENST00000475470 DPH3P1Q9H4G8 78 aa11.41□□□□□ -0.58
RPUSD3-215ENST00000475470 FASNP49327 2511 aaKnown RBP11.41□□□□□ -0.58
RPUSD3-215ENST00000475470 OR4C46A6NHA9 309 aa11.41□□□□□ -0.58
RPUSD3-215ENST00000475470 TSSC4Q9Y5U2 329 aaPredicted RBP11.41□□□□□ -0.58
RPUSD3-215ENST00000475470 AGRNO00468 2067 aa11.41□□□□□ -0.58
RPUSD3-215ENST00000475470 TRAV9-2A0A087WT02 112 aa11.4□□□□□ -0.58
RPUSD3-215ENST00000475470 IGLC3P0DOY3 106 aa11.4□□□□□ -0.58
RPUSD3-215ENST00000475470 Q6ZN92 141 aa11.4□□□□□ -0.58
RPUSD3-215ENST00000475470 MRPL52Q86TS9 123 aaKnown RBP11.4□□□□□ -0.58
RPUSD3-215ENST00000475470 FHL3Q13643 280 aa11.4□□□□□ -0.58
RPUSD3-215ENST00000475470 CD300EQ496F6 205 aaPredicted RBP11.4□□□□□ -0.58
RPUSD3-215ENST00000475470 AMTNQ6UX39 209 aa11.4□□□□□ -0.58
RPUSD3-215ENST00000475470 NRACQ8N912 160 aa11.4□□□□□ -0.58
RPUSD3-215ENST00000475470 AP1S3Q96PC3 154 aa11.4□□□□□ -0.58
RPUSD3-215ENST00000475470 UQCR10Q9UDW1 63 aa11.4□□□□□ -0.58
RPUSD3-215ENST00000475470 SORL1Q92673 2214 aa11.4□□□□□ -0.58
RPUSD3-215ENST00000475470 TMEM208Q9BTX3 173 aa11.39□□□□□ -0.59
RPUSD3-215ENST00000475470 LINC01546A6NGU7 62 aa11.39□□□□□ -0.59
RPUSD3-215ENST00000475470 MGPP08493 103 aa11.39□□□□□ -0.59
RPUSD3-215ENST00000475470 HLA-DRB4P13762 266 aa11.39□□□□□ -0.59
RPUSD3-215ENST00000475470 Q8N8P6 123 aa11.39□□□□□ -0.59
RPUSD3-215ENST00000475470 MCRIP2Q9BUT9 160 aaKnown RBP11.39□□□□□ -0.59
RPUSD3-215ENST00000475470 HLA-DRB4X5D2U9 266 aa11.39□□□□□ -0.59
RPUSD3-215ENST00000475470 CUBNO60494 3623 aa11.39□□□□□ -0.59
RPUSD3-215ENST00000475470 IGHV1OR15-1A0A075B7D0 117 aa11.38□□□□□ -0.59
RPUSD3-215ENST00000475470 NXPH4O95158 308 aa11.38□□□□□ -0.59
RPUSD3-215ENST00000475470 LY6G6DO95868 133 aa11.38□□□□□ -0.59
RPUSD3-215ENST00000475470 HNRNPA3P51991 378 aaKnown RBP11.38□□□□□ -0.59
RPUSD3-215ENST00000475470 IGHV3-16A0A0C4DH30 117 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 PRSS47A8MTI9 375 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 H3BMM0 161 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 Q8N1Y9 231 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 SPAG8Q99932 426 aaPredicted RBP11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 MAP6D1Q9H9H5 199 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 NF1P21359 2839 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 DLEU1O43261 78 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 NPSP0C0P6 89 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 SMIM17P0DL12 118 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 FCER1GP30273 86 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 LINC01545Q5VT33 79 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 DEFB125Q8N687 156 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 JMJD8Q96S16 334 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 HECTD1Q9ULT8 2610 aa11.37□□□□□ -0.59
RPUSD3-215ENST00000475470 MUC4Q99102 2169 aa11.36□□□□□ -0.59
RPUSD3-215ENST00000475470 IGLV2-18A0A075B6J9 118 aa11.36□□□□□ -0.59
RPUSD3-215ENST00000475470 COL5A1-AS1Q5SY13 56 aa11.36□□□□□ -0.59
RPUSD3-215ENST00000475470 MDFICQ9P1T7 246 aa11.36□□□□□ -0.59
RPUSD3-215ENST00000475470 IGLL1P15814 213 aa11.36□□□□□ -0.59
RPUSD3-215ENST00000475470 STPG4Q8N801 248 aa11.36□□□□□ -0.59
RPUSD3-215ENST00000475470 IFI27L1Q96BM0 104 aa11.36□□□□□ -0.59
RPUSD3-215ENST00000475470 C9orf85Q96MD7 179 aa11.36□□□□□ -0.59
RPUSD3-215ENST00000475470 PMCHL2Q9BQD1 86 aa11.36□□□□□ -0.59
RPUSD3-215ENST00000475470 TRAV25A0A0B4J276 109 aa11.35□□□□□ -0.59
RPUSD3-215ENST00000475470 NDUFA7O95182 113 aa11.35□□□□□ -0.59
RPUSD3-215ENST00000475470 MTORP42345 2549 aa11.35□□□□□ -0.59
RPUSD3-215ENST00000475470 ANK3Q12955 4377 aaKnown RBP11.35□□□□□ -0.59
RPUSD3-215ENST00000475470 A8MTW9 85 aa11.35□□□□□ -0.59
RPUSD3-215ENST00000475470 HSBP1L1C9JCN9 74 aa11.35□□□□□ -0.59
RPUSD3-215ENST00000475470 RASL10AQ92737 203 aa11.35□□□□□ -0.59
RPUSD3-215ENST00000475470 ZNF256Q9Y2P7 627 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms