RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 C1orf158Q8N1D5 194 aa9.76□□□□□ -0.85
RTN1-205ENST00000474911 MUC7Q8TAX7 377 aa9.76□□□□□ -0.85
RTN1-205ENST00000474911 H3BVH4 76 aa9.75□□□□□ -0.85
RTN1-205ENST00000474911 LCE2BO14633 110 aa9.75□□□□□ -0.85
RTN1-205ENST00000474911 SNAI2O43623 268 aa9.75□□□□□ -0.85
RTN1-205ENST00000474911 SPINK4O60575 86 aa9.75□□□□□ -0.85
RTN1-205ENST00000474911 OR5AL1P0C617 328 aa9.75□□□□□ -0.85
RTN1-205ENST00000474911 ARMS2P0C7Q2 107 aa9.75□□□□□ -0.85
RTN1-205ENST00000474911 RAB5AP20339 215 aa9.75□□□□□ -0.85
RTN1-205ENST00000474911 RIGQ13278 110 aa9.75□□□□□ -0.85
RTN1-205ENST00000474911 MRPL54Q6P161 138 aaKnown RBP9.75□□□□□ -0.85
RTN1-205ENST00000474911 RASL11AQ6T310 242 aa9.75□□□□□ -0.85
RTN1-205ENST00000474911 CSNK1G2-AS1Q8NCQ2 148 aa9.75□□□□□ -0.85
RTN1-205ENST00000474911 SSBP4Q9BWG4 385 aaPredicted RBP9.75□□□□□ -0.85
RTN1-205ENST00000474911 IGHV3-16A0A0C4DH30 117 aa9.74□□□□□ -0.85
RTN1-205ENST00000474911 A0A1B0GW15 77 aa9.74□□□□□ -0.85
RTN1-205ENST00000474911 COX19Q49B96 90 aa9.74□□□□□ -0.85
RTN1-205ENST00000474911 WDR73Q6P4I2 378 aa9.74□□□□□ -0.85
RTN1-205ENST00000474911 CNFNQ9BYD5 112 aa9.74□□□□□ -0.85
RTN1-205ENST00000474911 TP53TG3Q9ULZ0 132 aa9.74□□□□□ -0.85
RTN1-205ENST00000474911 DNAH7Q8WXX0 4024 aa9.74□□□□□ -0.85
RTN1-205ENST00000474911 IGHV3OR16-12A0A075B7B8 117 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 A0A1B0GXF2 115 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 UBE2CO00762 179 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 S100A8P05109 93 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 RNASE3P12724 160 aaKnown RBP9.73□□□□□ -0.85
RTN1-205ENST00000474911 HTN1P15515 57 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 CACNG7P62955 275 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 HBBP68871 147 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 SCRT2Q9NQ03 307 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 NBEAL2Q6ZNJ1 2754 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 RPS10P46783 165 aaKnown RBP9.73□□□□□ -0.85
RTN1-205ENST00000474911 ZNF415Q09FC8 603 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 ZNF705AQ6ZN79 300 aaPredicted RBP9.73□□□□□ -0.85
RTN1-205ENST00000474911 OR10AG1Q8NH19 301 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 C9orf85Q96MD7 179 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 RETNQ9HD89 108 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 PHLDA3Q9Y5J5 127 aa9.73□□□□□ -0.85
RTN1-205ENST00000474911 TIMM8BQ9Y5J9 83 aaPredicted RBP9.73□□□□□ -0.85
RTN1-205ENST00000474911 CASC10Q5T4H9 136 aa9.72□□□□□ -0.85
RTN1-205ENST00000474911 SPANXN1Q5VSR9 72 aa9.72□□□□□ -0.85
RTN1-205ENST00000474911 GNB1LQ9BYB4 327 aa9.72□□□□□ -0.85
RTN1-205ENST00000474911 MDFICQ9P1T7 246 aa9.72□□□□□ -0.85
RTN1-205ENST00000474911 MUC4Q99102 2169 aa9.71□□□□□ -0.86
RTN1-205ENST00000474911 IGHV4-4A0A075B6R2 117 aa9.71□□□□□ -0.86
RTN1-205ENST00000474911 MUC21A0A0G2JKD1 596 aa9.71□□□□□ -0.86
RTN1-205ENST00000474911 MUC21A0A140T8X8 626 aa9.71□□□□□ -0.86
RTN1-205ENST00000474911 MT-ND6P03923 174 aa9.71□□□□□ -0.86
RTN1-205ENST00000474911 NTF3P20783 257 aa9.71□□□□□ -0.86
RTN1-205ENST00000474911 CAMPP49913 170 aa9.71□□□□□ -0.86
RTN1-205ENST00000474911 TWIST1Q15672 202 aa9.71□□□□□ -0.86
RTN1-205ENST00000474911 Q6ZWC4 215 aa9.71□□□□□ -0.86
RTN1-205ENST00000474911 TMEM263Q8WUH6 116 aaKnown RBP9.71□□□□□ -0.86
RTN1-205ENST00000474911 TP53TG1Q9Y2A0 90 aa9.71□□□□□ -0.86
RTN1-205ENST00000474911 SNURFLB1AK76 121 aa9.7□□□□□ -0.86
RTN1-205ENST00000474911 NXPH4O95158 308 aa9.7□□□□□ -0.86
RTN1-205ENST00000474911 HLA-DQA1P01909 254 aa9.7□□□□□ -0.86
RTN1-205ENST00000474911 RAB4BP61018 213 aa9.7□□□□□ -0.86
RTN1-205ENST00000474911 RRN3P1Q2M238 152 aa9.7□□□□□ -0.86
RTN1-205ENST00000474911 ZNF493Q6ZR52 646 aa9.7□□□□□ -0.86
RTN1-205ENST00000474911 TMEM136Q6ZRR5 245 aa9.7□□□□□ -0.86
RTN1-205ENST00000474911 ZFP82Q8N141 532 aa9.7□□□□□ -0.86
RTN1-205ENST00000474911 C11orf72Q8NBR9 251 aa9.7□□□□□ -0.86
RTN1-205ENST00000474911 OVOL2Q9BRP0 275 aa9.7□□□□□ -0.86
RTN1-205ENST00000474911 SPXQ9BT56 116 aa9.7□□□□□ -0.86
RTN1-205ENST00000474911 M0R381 172 aa9.69□□□□□ -0.86
RTN1-205ENST00000474911 PRM2P04554 102 aa9.69□□□□□ -0.86
RTN1-205ENST00000474911 AZU1P20160 251 aa9.69□□□□□ -0.86
RTN1-205ENST00000474911 SSTP61278 116 aa9.69□□□□□ -0.86
RTN1-205ENST00000474911 DEFB135Q30KP9 77 aa9.69□□□□□ -0.86
RTN1-205ENST00000474911 GATD1Q8NB37 220 aa9.69□□□□□ -0.86
RTN1-205ENST00000474911 SYT8Q8NBV8 401 aa9.69□□□□□ -0.86
RTN1-205ENST00000474911 RNASE8Q8TDE3 154 aaKnown RBP9.69□□□□□ -0.86
RTN1-205ENST00000474911 C16orf74Q96GX8 76 aa9.69□□□□□ -0.86
RTN1-205ENST00000474911 GSN-AS1Q9NRJ2 163 aa9.69□□□□□ -0.86
RTN1-205ENST00000474911 TRAPPC1Q9Y5R8 145 aa9.69□□□□□ -0.86
RTN1-205ENST00000474911 KMT2CQ8NEZ4 4911 aaKnown RBP9.69□□□□□ -0.86
RTN1-205ENST00000474911 SMIM9A6NGZ8 99 aa9.68□□□□□ -0.86
RTN1-205ENST00000474911 TRGC1P0CF51 173 aa9.68□□□□□ -0.86
RTN1-205ENST00000474911 SMIM15Q7Z3B0 74 aa9.68□□□□□ -0.86
RTN1-205ENST00000474911 PTH2Q96A98 100 aa9.68□□□□□ -0.86
RTN1-205ENST00000474911 MSRB1Q9NZV6 116 aa9.68□□□□□ -0.86
RTN1-205ENST00000474911 M0R2P5 195 aa9.67□□□□□ -0.86
RTN1-205ENST00000474911 SPRY2O43597 315 aa9.67□□□□□ -0.86
RTN1-205ENST00000474911 PIK3CD-AS1Q5SR53 167 aa9.67□□□□□ -0.86
RTN1-205ENST00000474911 IL17DQ8TAD2 202 aa9.67□□□□□ -0.86
RTN1-205ENST00000474911 FRZBQ92765 325 aa9.67□□□□□ -0.86
RTN1-205ENST00000474911 RNF183Q96D59 192 aa9.67□□□□□ -0.86
RTN1-205ENST00000474911 MRPL18Q9H0U6 180 aaKnown RBP9.67□□□□□ -0.86
RTN1-205ENST00000474911 X6R8D5 127 aa9.67□□□□□ -0.86
RTN1-205ENST00000474911 CSMD3Q7Z407 3707 aa9.67□□□□□ -0.86
RTN1-205ENST00000474911 TRGC2P03986 189 aa9.66□□□□□ -0.86
RTN1-205ENST00000474911 FABP9Q0Z7S8 132 aa9.66□□□□□ -0.86
RTN1-205ENST00000474911 AP1S3Q96PC3 154 aa9.66□□□□□ -0.86
RTN1-205ENST00000474911 TMEM191AQ9H0A3 160 aa9.66□□□□□ -0.86
RTN1-205ENST00000474911 C1orf196B1AJZ1 125 aa9.65□□□□□ -0.86
RTN1-205ENST00000474911 APCSP02743 223 aa9.65□□□□□ -0.86
RTN1-205ENST00000474911 ZNF876PQ49A33 203 aa9.65□□□□□ -0.86
RTN1-205ENST00000474911 OR11H2Q8NH07 326 aa9.65□□□□□ -0.86
RTN1-205ENST00000474911 PLAC8L1A1L4L8 177 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms