RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 IQCF2Q8IXL9 164 aa9.42□□□□□ -0.9
CCDC78-209ENST00000474647 TMEM70Q9BUB7 260 aa9.42□□□□□ -0.9
CCDC78-209ENST00000474647 A0A1B0GV50 99 aa9.41□□□□□ -0.9
CCDC78-209ENST00000474647 PPT1P50897 306 aa9.41□□□□□ -0.9
CCDC78-209ENST00000474647 TMEM183BQ1AE95 376 aa9.41□□□□□ -0.9
CCDC78-209ENST00000474647 TMEM183AQ8IXX5 376 aa9.41□□□□□ -0.9
CCDC78-209ENST00000474647 NHLRC2Q8NBF2 726 aa9.41□□□□□ -0.9
CCDC78-209ENST00000474647 LYPD6BQ8NI32 183 aa9.41□□□□□ -0.9
CCDC78-209ENST00000474647 Q9HAA7 133 aa9.41□□□□□ -0.9
CCDC78-209ENST00000474647 NAGKQ9UJ70 344 aa9.41□□□□□ -0.9
CCDC78-209ENST00000474647 ARL2-SNX15V9GYD0 113 aa9.41□□□□□ -0.9
CCDC78-209ENST00000474647 LOC100131303A0A0U1RQF7 123 aa9.4□□□□□ -0.9
CCDC78-209ENST00000474647 A0A1W2PRE2 83 aa9.4□□□□□ -0.9
CCDC78-209ENST00000474647 RAB14P61106 215 aa9.4□□□□□ -0.9
CCDC78-209ENST00000474647 FAM159AQ6UWV7 190 aa9.4□□□□□ -0.9
CCDC78-209ENST00000474647 NTN5Q8WTR8 489 aaPredicted RBP9.4□□□□□ -0.9
CCDC78-209ENST00000474647 TRGV11A0A075B6L2 103 aa9.39□□□□□ -0.91
CCDC78-209ENST00000474647 TRAV4A0A0B4J268 109 aa9.39□□□□□ -0.91
CCDC78-209ENST00000474647 CSN1S1P47710 185 aa9.39□□□□□ -0.91
CCDC78-209ENST00000474647 RANP62826 216 aaKnown RBP9.39□□□□□ -0.91
CCDC78-209ENST00000474647 CCL20P78556 96 aa9.39□□□□□ -0.91
CCDC78-209ENST00000474647 OR4C5Q8NGB2 326 aa9.39□□□□□ -0.91
CCDC78-209ENST00000474647 SPXQ9BT56 116 aa9.39□□□□□ -0.91
CCDC78-209ENST00000474647 MANBALQ9NQG1 85 aa9.39□□□□□ -0.91
CCDC78-209ENST00000474647 OTORQ9NRC9 128 aa9.39□□□□□ -0.91
CCDC78-209ENST00000474647 DNAH8Q96JB1 4490 aa9.38□□□□□ -0.91
CCDC78-209ENST00000474647 IGHV3-38A0A0C4DH36 116 aa9.38□□□□□ -0.91
CCDC78-209ENST00000474647 LRCOL1A6NCL2 159 aa9.38□□□□□ -0.91
CCDC78-209ENST00000474647 FAM74A7A6NL05 159 aa9.38□□□□□ -0.91
CCDC78-209ENST00000474647 GGTLC3B5MD39 225 aa9.38□□□□□ -0.91
CCDC78-209ENST00000474647 UBE2G2P60604 165 aa9.38□□□□□ -0.91
CCDC78-209ENST00000474647 COMMD7Q86VX2 200 aa9.38□□□□□ -0.91
CCDC78-209ENST00000474647 Q8N814 137 aa9.38□□□□□ -0.91
CCDC78-209ENST00000474647 RASL10AQ92737 203 aa9.38□□□□□ -0.91
CCDC78-209ENST00000474647 IGHV3-16A0A0C4DH30 117 aa9.37□□□□□ -0.91
CCDC78-209ENST00000474647 TRBV7-9A0A0J9YWB2 115 aa9.37□□□□□ -0.91
CCDC78-209ENST00000474647 PGPA6NDG6 321 aa9.37□□□□□ -0.91
CCDC78-209ENST00000474647 IFNA1P01562 189 aa9.37□□□□□ -0.91
CCDC78-209ENST00000474647 Q6AWC8 147 aa9.37□□□□□ -0.91
CCDC78-209ENST00000474647 ARL6IP6Q8N6S5 226 aa9.37□□□□□ -0.91
CCDC78-209ENST00000474647 NKX6-2Q9C056 277 aaPredicted RBP9.37□□□□□ -0.91
CCDC78-209ENST00000474647 FAM30AQ9NZY2 134 aa9.37□□□□□ -0.91
CCDC78-209ENST00000474647 GNG13Q9P2W3 67 aa9.37□□□□□ -0.91
CCDC78-209ENST00000474647 RBAKDNA6NC62 111 aa9.36□□□□□ -0.91
CCDC78-209ENST00000474647 PAGE4O60829 102 aa9.36□□□□□ -0.91
CCDC78-209ENST00000474647 IGHV3-30P01768 117 aa9.36□□□□□ -0.91
CCDC78-209ENST00000474647 IGHV3-33P01772 117 aa9.36□□□□□ -0.91
CCDC78-209ENST00000474647 IGHV3-30-3P0DP02 117 aa9.36□□□□□ -0.91
CCDC78-209ENST00000474647 IGHV3-30-5P0DP03 117 aa9.36□□□□□ -0.91
CCDC78-209ENST00000474647 LINC01556Q5JQF7 62 aa9.36□□□□□ -0.91
CCDC78-209ENST00000474647 OR10J3Q5JRS4 329 aa9.36□□□□□ -0.91
CCDC78-209ENST00000474647 SH2D6Q7Z4S9 175 aa9.36□□□□□ -0.91
CCDC78-209ENST00000474647 C5orf17Q8NAS9 161 aa9.36□□□□□ -0.91
CCDC78-209ENST00000474647 RPH3ALQ9UNE2 315 aa9.36□□□□□ -0.91
CCDC78-209ENST00000474647 TRAV8-6A0A0B4J262 113 aa9.35□□□□□ -0.91
CCDC78-209ENST00000474647 IBA57-AS1B1ANH7 110 aa9.35□□□□□ -0.91
CCDC78-209ENST00000474647 M0R2P5 195 aa9.35□□□□□ -0.91
CCDC78-209ENST00000474647 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
CCDC78-209ENST00000474647 BCL2P10415 239 aa9.35□□□□□ -0.91
CCDC78-209ENST00000474647 TAGLN2P37802 199 aaKnown RBP9.35□□□□□ -0.91
CCDC78-209ENST00000474647 SUMO1P63165 101 aaKnown RBP9.35□□□□□ -0.91
CCDC78-209ENST00000474647 CMTM2Q8TAZ6 248 aa9.35□□□□□ -0.91
CCDC78-209ENST00000474647 TCEAL7Q9BRU2 100 aa9.35□□□□□ -0.91
CCDC78-209ENST00000474647 MED9Q9NWA0 146 aa9.35□□□□□ -0.91
CCDC78-209ENST00000474647 DIRC3C9JPN6 131 aa9.34□□□□□ -0.91
CCDC78-209ENST00000474647 GNRH2O43555 120 aa9.34□□□□□ -0.91
CCDC78-209ENST00000474647 CST9LP1Q5W188 147 aa9.34□□□□□ -0.91
CCDC78-209ENST00000474647 SERTM2A0A1B0GWG4 89 aa9.33□□□□□ -0.92
CCDC78-209ENST00000474647 F6UZH7 168 aa9.33□□□□□ -0.92
CCDC78-209ENST00000474647 TCRAP04437 139 aa9.33□□□□□ -0.92
CCDC78-209ENST00000474647 TYMSP04818 313 aa9.33□□□□□ -0.92
CCDC78-209ENST00000474647 GATA1P15976 413 aaPredicted RBP9.33□□□□□ -0.92
CCDC78-209ENST00000474647 GNG5P63218 68 aa9.33□□□□□ -0.92
CCDC78-209ENST00000474647 MEF2BQ02080 365 aaPredicted RBP9.33□□□□□ -0.92
CCDC78-209ENST00000474647 LINC00528Q8N1L1 170 aa9.33□□□□□ -0.92
CCDC78-209ENST00000474647 VAX2Q9UIW0 290 aa9.33□□□□□ -0.92
CCDC78-209ENST00000474647 EPDR1Q9UM22 224 aa9.33□□□□□ -0.92
CCDC78-209ENST00000474647 RBFOX3A6NFN3 312 aa9.32□□□□□ -0.92
CCDC78-209ENST00000474647 FBLL1A6NHQ2 334 aaKnown RBP9.32□□□□□ -0.92
CCDC78-209ENST00000474647 PEX7O00628 323 aa9.32□□□□□ -0.92
CCDC78-209ENST00000474647 TIRAPP58753 221 aa9.32□□□□□ -0.92
CCDC78-209ENST00000474647 TDRG1Q3Y452 100 aa9.32□□□□□ -0.92
CCDC78-209ENST00000474647 TOR2AQ5JU69 321 aa9.32□□□□□ -0.92
CCDC78-209ENST00000474647 ZNF506Q5JVG8 444 aa9.32□□□□□ -0.92
CCDC78-209ENST00000474647 CYB561D1Q8N8Q1 229 aa9.32□□□□□ -0.92
CCDC78-209ENST00000474647 HIST1H2BAQ96A08 127 aa9.32□□□□□ -0.92
CCDC78-209ENST00000474647 LENEPQ9Y5L5 61 aa9.32□□□□□ -0.92
CCDC78-209ENST00000474647 IGHV3-73A0A0B4J1V6 119 aa9.31□□□□□ -0.92
CCDC78-209ENST00000474647 PFN1P07737 140 aaKnown RBP9.31□□□□□ -0.92
CCDC78-209ENST00000474647 GOLT1AQ6ZVE7 132 aa9.31□□□□□ -0.92
CCDC78-209ENST00000474647 SLC25A29Q8N8R3 303 aa9.31□□□□□ -0.92
CCDC78-209ENST00000474647 PRADC1Q9BSG0 188 aa9.31□□□□□ -0.92
CCDC78-209ENST00000474647 SDF2L1Q9HCN8 221 aa9.31□□□□□ -0.92
CCDC78-209ENST00000474647 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.3□□□□□ -0.92
CCDC78-209ENST00000474647 TRAV21A0A0B4J279 112 aa9.3□□□□□ -0.92
CCDC78-209ENST00000474647 SCO2A0A1W2PP80 73 aa9.3□□□□□ -0.92
CCDC78-209ENST00000474647 K7EQM0 130 aa9.3□□□□□ -0.92
CCDC78-209ENST00000474647 LECT2O14960 151 aa9.3□□□□□ -0.92
CCDC78-209ENST00000474647 PDE6DO43924 150 aa9.3□□□□□ -0.92
CCDC78-209ENST00000474647 NDUFS6O75380 124 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms