RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 UBE2D1P51668 147 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 UBE2D3P61077 147 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 SUMO2P61956 95 aaKnown RBP6.21□□□□□ -1.42
CCDC93-208ENST00000474546 UBE2D2P62837 147 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 BSPH1Q075Z2 132 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 SRSF9Q13242 221 aaKnown RBP eCLIP6.21□□□□□ -1.42
CCDC93-208ENST00000474546 EBI3Q14213 229 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 WFDC2Q14508 124 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 DEFB109BQ30KR1 87 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 Q6Q795 121 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 WFDC8Q8IUA0 241 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 LY6G5BQ8NDX9 201 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 LINC01600Q96MT4 127 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 METTL26Q96S19 204 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 ZNRD1Q9P1U0 126 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 CTSZQ9UBR2 303 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 IGKV2-40A0A087WW87 121 aaPredicted RBP6.2□□□□□ -1.42
CCDC93-208ENST00000474546 IGKV2D-26A0A0A0MRZ7 120 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 TRAV21A0A0B4J279 112 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 OVOL1O14753 267 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 TIMM23O14925 209 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 IGKV2D-40P01614 121 aaPredicted RBP6.2□□□□□ -1.42
CCDC93-208ENST00000474546 CD3EP07766 207 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 ZNF688P0C7X2 276 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 DIAPH2-AS1Q14236 149 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 ASPHD1Q5U4P2 390 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 ZFAND6Q6FIF0 208 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 SBSPONQ8IVN8 264 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 NRACQ8N912 160 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 NEXN-AS1Q8NBZ9 246 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 FAM110DQ8TAY7 271 aaPredicted RBP6.2□□□□□ -1.42
CCDC93-208ENST00000474546 PGPEP1Q9NXJ5 209 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 ONECUT1Q9UBC0 465 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 ERG28Q9UKR5 140 aa6.2□□□□□ -1.42
CCDC93-208ENST00000474546 EPPK1P58107 5090 aaKnown RBP6.19□□□□□ -1.42
CCDC93-208ENST00000474546 IGHV3-21A0A0B4J1V1 117 aa6.19□□□□□ -1.42
CCDC93-208ENST00000474546 IGHV3-72A0A0B4J1Y9 119 aa6.19□□□□□ -1.42
CCDC93-208ENST00000474546 ZNF815PA8K554 130 aa6.19□□□□□ -1.42
CCDC93-208ENST00000474546 PRTN3P24158 256 aa6.19□□□□□ -1.42
CCDC93-208ENST00000474546 FAM27E3Q08E93 113 aa6.19□□□□□ -1.42
CCDC93-208ENST00000474546 ERCC8Q13216 396 aa6.19□□□□□ -1.42
CCDC93-208ENST00000474546 PRR30Q53SZ7 412 aaPredicted RBP6.19□□□□□ -1.42
CCDC93-208ENST00000474546 ATP1A1-AS1Q5TC04 95 aa6.19□□□□□ -1.42
CCDC93-208ENST00000474546 LYPD2Q6UXB3 125 aa6.19□□□□□ -1.42
CCDC93-208ENST00000474546 TEX29Q8N6K0 151 aa6.19□□□□□ -1.42
CCDC93-208ENST00000474546 EEF1AKMT3Q96AZ1 226 aa6.19□□□□□ -1.42
CCDC93-208ENST00000474546 C17orf77Q96MU5 243 aa6.19□□□□□ -1.42
CCDC93-208ENST00000474546 FANCD2OSQ96PS1 177 aa6.19□□□□□ -1.42
CCDC93-208ENST00000474546 TIMM17AQ99595 171 aa6.19□□□□□ -1.42
CCDC93-208ENST00000474546 C11orf86A6NJI1 115 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 ODF3BA8MYP8 253 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 SMKR1H3BMG3 65 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 K7ERJ3 54 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 BUB3O43684 328 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 TSPAN13O95857 204 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 CTSGP08311 255 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 P0DMU3 169 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 FAM231AP0DMU4 169 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 FAM231CP0DMU5 169 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 GAGE5Q13069 117 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 GAGE6Q13070 117 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 TM4SF20Q53R12 229 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 Q6ZUT4 128 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 POM121L12Q8N7R1 296 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 SYT8Q8NBV8 401 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 OR10J6PQ8NGY7 276 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 CFHR4Q92496 578 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 KIR2DL4Q99706 377 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 NAA38Q9BRA0 125 aaKnown RBP6.18□□□□□ -1.42
CCDC93-208ENST00000474546 UFC1Q9Y3C8 167 aa6.18□□□□□ -1.42
CCDC93-208ENST00000474546 INTS1Q8N201 2190 aaKnown RBP6.18□□□□□ -1.42
CCDC93-208ENST00000474546 SONP18583 2426 aaKnown RBP6.18□□□□□ -1.42
CCDC93-208ENST00000474546 IGHV4OR15-8A0A075B7B6 117 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 A0A087WW49 117 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 A0A0B4J2C4 111 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 FAM223BA6NKX1 122 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 SNCGO76070 127 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 BRI3O95415 125 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 LY6G6DO95868 133 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 LGALS1P09382 135 aaKnown RBP6.17□□□□□ -1.42
CCDC93-208ENST00000474546 S100A4P26447 101 aaKnown RBP6.17□□□□□ -1.42
CCDC93-208ENST00000474546 CNTFRP26992 372 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 HES1Q14469 280 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 PMVKQ15126 192 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 C2orf66Q6UXQ4 117 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 FAM223AQ8IWN6 122 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 C10orf126Q8N4M7 172 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 Q8N6K4 173 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 COPS9Q8WXC6 57 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 RNF183Q96D59 192 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 ANAPC13Q9BS18 74 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 PRADC1Q9BSG0 188 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 PRO1854Q9UHT4 67 aa6.17□□□□□ -1.42
CCDC93-208ENST00000474546 LOC107984156A0A0G2JMH3 177 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 A0A0J9YX75 114 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 SDHAF1A6NFY7 115 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 INAFM1C9JVW0 142 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 VCYO14598 125 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 COX6CP09669 75 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 SRD5A1P18405 259 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms