RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 NAGKQ9UJ70 344 aa4.76□□□□□ -1.65
VPS50-211ENST00000474412 TRGV2A0A075B6R0 118 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 FXYD6-FXYD2A0A087WZ82 144 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 PGPA6NDG6 321 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 GGTLC3B5MD39 225 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 SMLR1H3BR10 107 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 PAGE4O60829 102 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 STAG3L2P0CL84 134 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 STAG3L3P0CL85 134 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 LINC01547P58512 204 aaPredicted RBP4.75□□□□□ -1.65
VPS50-211ENST00000474412 ZNF415Q09FC8 603 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 ZNF266Q14584 549 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 ZNF726P1Q15940 193 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 TMEM183BQ1AE95 376 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 ACOT6Q3I5F7 207 aaPredicted RBP4.75□□□□□ -1.65
VPS50-211ENST00000474412 IBA57Q5T440 356 aaKnown RBP4.75□□□□□ -1.65
VPS50-211ENST00000474412 C1orf134Q5TEV5 83 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 Q6AWC8 147 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 RPL7L1Q6DKI1 246 aaKnown RBP4.75□□□□□ -1.65
VPS50-211ENST00000474412 TMEM183AQ8IXX5 376 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 OR10G4Q8NGN3 311 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 OR10G9Q8NGN4 311 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 OR10G7Q8NGN6 311 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 MED28Q9H204 178 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 OTORQ9NRC9 128 aa4.75□□□□□ -1.65
VPS50-211ENST00000474412 LOC100131303A0A0U1RQF7 123 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 RBAKDNA6NC62 111 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 TYMSP04818 313 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 GIPP09681 153 aaPredicted RBP4.74□□□□□ -1.65
VPS50-211ENST00000474412 CFC1BP0CG36 223 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 CFC1P0CG37 223 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 GCHFRP30047 84 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 CSN1S1P47710 185 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 ZNF80P51504 273 aaPredicted RBP4.74□□□□□ -1.65
VPS50-211ENST00000474412 CCL18P55774 89 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 TAS2R45P59539 299 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 C6orf223Q8N319 242 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 OR2G3Q8NGZ4 309 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 ST6GAL2Q96JF0 529 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 C18orf15Q96N68 181 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 SCRT2Q9NQ03 307 aa4.74□□□□□ -1.65
VPS50-211ENST00000474412 MRPS16Q9Y3D3 137 aaKnown RBP4.74□□□□□ -1.65
VPS50-211ENST00000474412 A0A1W2PPV4 95 aa4.73□□□□□ -1.65
VPS50-211ENST00000474412 GNRH2O43555 120 aa4.73□□□□□ -1.65
VPS50-211ENST00000474412 NMBP08949 121 aa4.73□□□□□ -1.65
VPS50-211ENST00000474412 FUSP35637 526 aaKnown RBP eCLIP4.73□□□□□ -1.65
VPS50-211ENST00000474412 GAGE5Q13069 117 aa4.73□□□□□ -1.65
VPS50-211ENST00000474412 GAGE6Q13070 117 aa4.73□□□□□ -1.65
VPS50-211ENST00000474412 LYPD1Q8N2G4 141 aa4.73□□□□□ -1.65
VPS50-211ENST00000474412 PSMG3Q9BT73 122 aaPredicted RBP4.73□□□□□ -1.65
VPS50-211ENST00000474412 UPK3BQ9BT76 320 aa4.73□□□□□ -1.65
VPS50-211ENST00000474412 Q9H8V8 135 aa4.73□□□□□ -1.65
VPS50-211ENST00000474412 TNFSF18Q9UNG2 199 aa4.73□□□□□ -1.65
VPS50-211ENST00000474412 DNAH5Q8TE73 4624 aa4.73□□□□□ -1.65
VPS50-211ENST00000474412 IGLV5-45A0A087WSX0 123 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 IGHV3-16A0A0C4DH30 117 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 TRBV7-9A0A0J9YWB2 115 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 H3BNG1 76 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 ARPC5O15511 151 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 TCRAP04437 139 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 CRYBA4P53673 196 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 FGF8P55075 233 aaPredicted RBP4.72□□□□□ -1.65
VPS50-211ENST00000474412 LINC00315P59091 139 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 DPPA3Q6W0C5 159 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 WFDC10BQ8IUB3 73 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 IQCF2Q8IXL9 164 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 OR2T35Q8NGX2 323 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 CMTM2Q8TAZ6 248 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 TREM1Q9NP99 234 aa4.72□□□□□ -1.65
VPS50-211ENST00000474412 RYR1P21817 5038 aa4.71□□□□□ -1.65
VPS50-211ENST00000474412 TRAV34A0A0B4J273 112 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 NXPH4O95158 308 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 GCGP01275 180 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 UBE2G2P60604 165 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 TDRG1Q3Y452 100 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 SOHLH1Q5JUK2 328 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 FAM159AQ6UWV7 190 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 Q6ZRN7 208 aaPredicted RBP4.71□□□□□ -1.66
VPS50-211ENST00000474412 Q86TA4 180 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 C5orf17Q8NAS9 161 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 SUN5Q8TC36 379 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 LINC00479Q96M42 142 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 CYTL1Q9NRR1 136 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 LENEPQ9Y5L5 61 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 ICOSQ9Y6W8 199 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 LRP1BQ9NZR2 4599 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 HSPG2P98160 4391 aa4.71□□□□□ -1.66
VPS50-211ENST00000474412 TRAV21A0A0B4J279 112 aa4.7□□□□□ -1.66
VPS50-211ENST00000474412 TRGV4A0A0C4DH28 118 aa4.7□□□□□ -1.66
VPS50-211ENST00000474412 K7EQD1 137 aa4.7□□□□□ -1.66
VPS50-211ENST00000474412 DNAH10OSP0CZ25 163 aa4.7□□□□□ -1.66
VPS50-211ENST00000474412 RNASE3P12724 160 aaKnown RBP4.7□□□□□ -1.66
VPS50-211ENST00000474412 FHITP49789 147 aa4.7□□□□□ -1.66
VPS50-211ENST00000474412 RPL24P83731 157 aaKnown RBP4.7□□□□□ -1.66
VPS50-211ENST00000474412 FLI1Q01543 452 aaPredicted RBP4.7□□□□□ -1.66
VPS50-211ENST00000474412 RGS21Q2M5E4 152 aa4.7□□□□□ -1.66
VPS50-211ENST00000474412 FAM74A1Q5RGS3 127 aa4.7□□□□□ -1.66
VPS50-211ENST00000474412 PRNTQ86SH4 94 aa4.7□□□□□ -1.66
VPS50-211ENST00000474412 CYB561D1Q8N8Q1 229 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms