RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 RAB4AP20338 218 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 CKS2P33552 79 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 IFI27P40305 119 aaPredicted RBP4.61□□□□□ -1.67
CLK1-210ENST00000473565 ASIPP42127 132 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 SAMD13Q5VXD3 122 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 FOXI2Q6ZQN5 318 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 PRELID3AQ96N28 172 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 JMJD8Q96S16 334 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 CNFNQ9BYD5 112 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 PRO1933Q9H354 126 aa4.61□□□□□ -1.67
CLK1-210ENST00000473565 PKD1L1Q8TDX9 2849 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 CDKN1BP46527 198 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 ODF3L2Q3SX64 289 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 DMRTA1Q5VZB9 504 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 FAM159AQ6UWV7 190 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 TMEM191AQ9H0A3 160 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 JPT2Q9H910 190 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 MDFICQ9P1T7 246 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 H3BMM0 161 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 SNAI2O43623 268 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 CRLF1O75462 422 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 OR5AL1P0C617 328 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 ORMDL3Q8N138 153 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 C14orf178Q8N769 122 aaPredicted RBP4.6□□□□□ -1.67
CLK1-210ENST00000473565 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.6□□□□□ -1.67
CLK1-210ENST00000473565 GSN-AS1Q9NRJ2 163 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 PHLDA3Q9Y5J5 127 aa4.6□□□□□ -1.67
CLK1-210ENST00000473565 IGHV1-24A0A0C4DH33 117 aa4.59□□□□□ -1.67
CLK1-210ENST00000473565 CRXO43186 299 aaPredicted RBP4.59□□□□□ -1.67
CLK1-210ENST00000473565 LEPP41159 167 aa4.59□□□□□ -1.67
CLK1-210ENST00000473565 TDRG1Q3Y452 100 aa4.59□□□□□ -1.67
CLK1-210ENST00000473565 SIGLEC8Q9NYZ4 499 aa4.59□□□□□ -1.67
CLK1-210ENST00000473565 DUSP14O95147 198 aaKnown RBP4.59□□□□□ -1.67
CLK1-210ENST00000473565 LINC00614P0C842 121 aa4.59□□□□□ -1.67
CLK1-210ENST00000473565 HLA-DRB4P13762 266 aa4.59□□□□□ -1.67
CLK1-210ENST00000473565 Q8N1Y9 231 aa4.59□□□□□ -1.67
CLK1-210ENST00000473565 PRSS3P2Q8NHM4 247 aa4.59□□□□□ -1.67
CLK1-210ENST00000473565 DEFB104AQ8WTQ1 72 aa4.59□□□□□ -1.67
CLK1-210ENST00000473565 MCRIP2Q9BUT9 160 aaKnown RBP4.59□□□□□ -1.67
CLK1-210ENST00000473565 HLA-DRB4X5D2U9 266 aa4.59□□□□□ -1.67
CLK1-210ENST00000473565 TRBV7-9A0A0J9YWB2 115 aa4.59□□□□□ -1.68
CLK1-210ENST00000473565 OR4C46A6NHA9 309 aa4.59□□□□□ -1.68
CLK1-210ENST00000473565 C3orf79P0CE67 100 aa4.59□□□□□ -1.68
CLK1-210ENST00000473565 SPATA12Q7Z6I5 190 aa4.59□□□□□ -1.68
CLK1-210ENST00000473565 SPAG8Q99932 426 aaPredicted RBP4.59□□□□□ -1.68
CLK1-210ENST00000473565 U3KQK5 164 aa4.59□□□□□ -1.68
CLK1-210ENST00000473565 H0Y8G0 127 aa4.58□□□□□ -1.68
CLK1-210ENST00000473565 MGPP08493 103 aa4.58□□□□□ -1.68
CLK1-210ENST00000473565 ATOH7Q8N100 152 aa4.58□□□□□ -1.68
CLK1-210ENST00000473565 IGHV1OR15-1A0A075B7D0 117 aa4.58□□□□□ -1.68
CLK1-210ENST00000473565 A0A087WWL8 130 aa4.58□□□□□ -1.68
CLK1-210ENST00000473565 IGHV3-16A0A0C4DH30 117 aa4.58□□□□□ -1.68
CLK1-210ENST00000473565 PF4P02776 101 aa4.58□□□□□ -1.68
CLK1-210ENST00000473565 FOSL1P15407 271 aa4.58□□□□□ -1.68
CLK1-210ENST00000473565 FA2HQ7L5A8 372 aa4.58□□□□□ -1.68
CLK1-210ENST00000473565 Q8N976 141 aa4.58□□□□□ -1.68
CLK1-210ENST00000473565 SCRT2Q9NQ03 307 aa4.58□□□□□ -1.68
CLK1-210ENST00000473565 XCL2Q9UBD3 114 aa4.58□□□□□ -1.68
CLK1-210ENST00000473565 TNFRSF6BO95407 300 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 TSPOP30536 169 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 ODF3Q96PU9 254 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 AP5S1Q9NUS5 200 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 COL6A5A8TX70 2615 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 IGHV4-4A0A075B6R2 117 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 IGHV3OR16-12A0A075B7B8 117 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 A0A096LNJ9 63 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 CBY3A6NI87 242 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 LINC00587B1AMM8 73 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 CACNG7P62955 275 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 FAM74A4Q5TZK3 123 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 SMIM15Q7Z3B0 74 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 ZNF664Q8N3J9 261 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 RPL39LQ96EH5 51 aaKnown RBP4.57□□□□□ -1.68
CLK1-210ENST00000473565 TRAV2A0A0B4J234 112 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 OR11H12B2RN74 326 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 IGLV1-51P01701 117 aa4.57□□□□□ -1.68
CLK1-210ENST00000473565 CHCHD1Q96BP2 118 aaKnown RBP4.57□□□□□ -1.68
CLK1-210ENST00000473565 NACAE9PAV3 2078 aa4.56□□□□□ -1.68
CLK1-210ENST00000473565 RPL35AP18077 110 aaKnown RBP4.56□□□□□ -1.68
CLK1-210ENST00000473565 MAJINQ3KP22 176 aa4.56□□□□□ -1.68
CLK1-210ENST00000473565 NDUFA11Q86Y39 141 aa4.56□□□□□ -1.68
CLK1-210ENST00000473565 STHQ8IWL8 128 aa4.56□□□□□ -1.68
CLK1-210ENST00000473565 LINC00482Q8N8I6 264 aa4.56□□□□□ -1.68
CLK1-210ENST00000473565 NRACQ8N912 160 aa4.56□□□□□ -1.68
CLK1-210ENST00000473565 PMCHL2Q9BQD1 86 aa4.56□□□□□ -1.68
CLK1-210ENST00000473565 LEPROTL1O95214 131 aa4.56□□□□□ -1.68
CLK1-210ENST00000473565 NEGR1Q7Z3B1 354 aa4.56□□□□□ -1.68
CLK1-210ENST00000473565 OR2K2Q8NGT1 345 aa4.56□□□□□ -1.68
CLK1-210ENST00000473565 PAM16Q9Y3D7 125 aa4.56□□□□□ -1.68
CLK1-210ENST00000473565 TRAV25A0A0B4J276 109 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 TCAPO15273 167 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 C9orf85Q96MD7 179 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 AP1S3Q96PC3 154 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 LINC01587Q99440 93 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 MAP1LC3AQ9H492 121 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 DPH3P1Q9H4G8 78 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 IGHV3-73A0A0B4J1V6 119 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 A8MTW9 85 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 F5H697 171 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 AZU1P20160 251 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms