RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 C9JCJ5 164 aa8.74□□□□□ -1.01
C9orf85-204ENST00000473252 H2AFB1P0C5Y9 115 aa8.74□□□□□ -1.01
C9orf85-204ENST00000473252 ZNF876PQ49A33 203 aa8.74□□□□□ -1.01
C9orf85-204ENST00000473252 DNLZQ5SXM8 178 aa8.74□□□□□ -1.01
C9orf85-204ENST00000473252 CST9LP1Q5W188 147 aa8.74□□□□□ -1.01
C9orf85-204ENST00000473252 FAM213BQ8TBF2 198 aa8.74□□□□□ -1.01
C9orf85-204ENST00000473252 PCNPQ8WW12 178 aaKnown RBP8.74□□□□□ -1.01
C9orf85-204ENST00000473252 TXNDC17Q9BRA2 123 aa8.74□□□□□ -1.01
C9orf85-204ENST00000473252 MRPL18Q9H0U6 180 aaKnown RBP8.74□□□□□ -1.01
C9orf85-204ENST00000473252 C11orf21Q9P2W6 132 aa8.74□□□□□ -1.01
C9orf85-204ENST00000473252 K7EP13 123 aa8.73□□□□□ -1.01
C9orf85-204ENST00000473252 K7EQD1 137 aa8.73□□□□□ -1.01
C9orf85-204ENST00000473252 PAGE4O60829 102 aa8.73□□□□□ -1.01
C9orf85-204ENST00000473252 SFTA3P0C7M3 94 aa8.73□□□□□ -1.01
C9orf85-204ENST00000473252 RNASE3P12724 160 aaKnown RBP8.73□□□□□ -1.01
C9orf85-204ENST00000473252 SRIP30626 198 aa8.73□□□□□ -1.01
C9orf85-204ENST00000473252 LYPD5Q6UWN5 251 aa8.73□□□□□ -1.01
C9orf85-204ENST00000473252 Q6ZNX1 250 aa8.73□□□□□ -1.01
C9orf85-204ENST00000473252 IGKV3D-20A0A0C4DH25 116 aa8.72□□□□□ -1.01
C9orf85-204ENST00000473252 TEX46H3BTG2 121 aa8.72□□□□□ -1.01
C9orf85-204ENST00000473252 SIVA1O15304 175 aa8.72□□□□□ -1.01
C9orf85-204ENST00000473252 RS1O15537 224 aa8.72□□□□□ -1.01
C9orf85-204ENST00000473252 LTAP01374 205 aa8.72□□□□□ -1.01
C9orf85-204ENST00000473252 C1QBP02746 253 aa8.72□□□□□ -1.01
C9orf85-204ENST00000473252 S100A4P26447 101 aaKnown RBP8.72□□□□□ -1.01
C9orf85-204ENST00000473252 AKR1C3P42330 323 aa8.72□□□□□ -1.01
C9orf85-204ENST00000473252 SSBP4Q9BWG4 385 aaPredicted RBP8.72□□□□□ -1.01
C9orf85-204ENST00000473252 IL36BQ9NZH7 164 aa8.72□□□□□ -1.01
C9orf85-204ENST00000473252 TRAV1-1A0A0B4J248 108 aa8.71□□□□□ -1.02
C9orf85-204ENST00000473252 TRBV6-4A0A1B0GX49 114 aa8.71□□□□□ -1.02
C9orf85-204ENST00000473252 A8MWV9 139 aa8.71□□□□□ -1.02
C9orf85-204ENST00000473252 GYPEP15421 78 aa8.71□□□□□ -1.02
C9orf85-204ENST00000473252 GATA1P15976 413 aaPredicted RBP8.71□□□□□ -1.02
C9orf85-204ENST00000473252 ASIPP42127 132 aa8.71□□□□□ -1.02
C9orf85-204ENST00000473252 ZNF674Q2M3X9 581 aa8.71□□□□□ -1.02
C9orf85-204ENST00000473252 FAM162BQ5T6X4 162 aa8.71□□□□□ -1.02
C9orf85-204ENST00000473252 ZC2HC1AQ96GY0 325 aa8.71□□□□□ -1.02
C9orf85-204ENST00000473252 MANBALQ9NQG1 85 aa8.71□□□□□ -1.02
C9orf85-204ENST00000473252 PGPEP1LA6NFU8 196 aa8.7□□□□□ -1.02
C9orf85-204ENST00000473252 B4DEV8 164 aa8.7□□□□□ -1.02
C9orf85-204ENST00000473252 MGST1P10620 155 aaKnown RBP8.7□□□□□ -1.02
C9orf85-204ENST00000473252 SULT1A2P50226 295 aa8.7□□□□□ -1.02
C9orf85-204ENST00000473252 CRIP1P50238 77 aa8.7□□□□□ -1.02
C9orf85-204ENST00000473252 TIRAPP58753 221 aa8.7□□□□□ -1.02
C9orf85-204ENST00000473252 CFAP126Q5VTH2 177 aa8.7□□□□□ -1.02
C9orf85-204ENST00000473252 ZFP2Q6ZN57 461 aa8.7□□□□□ -1.02
C9orf85-204ENST00000473252 SLC51BQ86UW2 128 aa8.7□□□□□ -1.02
C9orf85-204ENST00000473252 PRADC1Q9BSG0 188 aa8.7□□□□□ -1.02
C9orf85-204ENST00000473252 DNAH2Q9P225 4427 aa8.7□□□□□ -1.02
C9orf85-204ENST00000473252 TRAV9-2A0A087WT02 112 aa8.69□□□□□ -1.02
C9orf85-204ENST00000473252 KRBOX1C9JBD0 128 aa8.69□□□□□ -1.02
C9orf85-204ENST00000473252 NXPH4O95158 308 aa8.69□□□□□ -1.02
C9orf85-204ENST00000473252 RHOHQ15669 191 aa8.69□□□□□ -1.02
C9orf85-204ENST00000473252 ZNF506Q5JVG8 444 aa8.69□□□□□ -1.02
C9orf85-204ENST00000473252 DNAH17Q9UFH2 4485 aa8.68□□□□□ -1.02
C9orf85-204ENST00000473252 SH2D1AO60880 128 aa8.68□□□□□ -1.02
C9orf85-204ENST00000473252 SYT8Q8NBV8 401 aa8.68□□□□□ -1.02
C9orf85-204ENST00000473252 MLST8Q9BVC4 326 aa8.68□□□□□ -1.02
C9orf85-204ENST00000473252 FAT2Q9NYQ8 4349 aa8.68□□□□□ -1.02
C9orf85-204ENST00000473252 CXCL1P09341 107 aa8.67□□□□□ -1.02
C9orf85-204ENST00000473252 ARMS2P0C7Q2 107 aa8.67□□□□□ -1.02
C9orf85-204ENST00000473252 MED14OSP0DP75 135 aa8.67□□□□□ -1.02
C9orf85-204ENST00000473252 AKAP14Q86UN6 197 aa8.67□□□□□ -1.02
C9orf85-204ENST00000473252 SLC25A29Q8N8R3 303 aa8.67□□□□□ -1.02
C9orf85-204ENST00000473252 LY96Q9Y6Y9 160 aa8.67□□□□□ -1.02
C9orf85-204ENST00000473252 A0A1B0GV50 99 aa8.66□□□□□ -1.02
C9orf85-204ENST00000473252 SCO2A0A1W2PP80 73 aa8.66□□□□□ -1.02
C9orf85-204ENST00000473252 RHODO00212 210 aa8.66□□□□□ -1.02
C9orf85-204ENST00000473252 TAGLN2P37802 199 aaKnown RBP8.66□□□□□ -1.02
C9orf85-204ENST00000473252 BAGE2Q86Y30 109 aa8.66□□□□□ -1.02
C9orf85-204ENST00000473252 C11orf52Q96A22 123 aa8.66□□□□□ -1.02
C9orf85-204ENST00000473252 SMIM12Q96EX1 92 aa8.66□□□□□ -1.02
C9orf85-204ENST00000473252 KRTAP1-5Q9BYS1 174 aa8.66□□□□□ -1.02
C9orf85-204ENST00000473252 PARLQ9H300 379 aa8.66□□□□□ -1.02
C9orf85-204ENST00000473252 SCRT2Q9NQ03 307 aa8.66□□□□□ -1.02
C9orf85-204ENST00000473252 HECTD4Q9Y4D8 3996 aa8.66□□□□□ -1.02
C9orf85-204ENST00000473252 H3BVH4 76 aa8.65□□□□□ -1.02
C9orf85-204ENST00000473252 M0R036 132 aa8.65□□□□□ -1.02
C9orf85-204ENST00000473252 IFNA1P01562 189 aa8.65□□□□□ -1.02
C9orf85-204ENST00000473252 DNAH10OSP0CZ25 163 aa8.65□□□□□ -1.02
C9orf85-204ENST00000473252 EVI2AP22794 236 aa8.65□□□□□ -1.02
C9orf85-204ENST00000473252 NFE4Q86UQ8 179 aa8.65□□□□□ -1.02
C9orf85-204ENST00000473252 C10orf126Q8N4M7 172 aa8.65□□□□□ -1.02
C9orf85-204ENST00000473252 NHLRC2Q8NBF2 726 aa8.65□□□□□ -1.02
C9orf85-204ENST00000473252 GNG13Q9P2W3 67 aa8.65□□□□□ -1.02
C9orf85-204ENST00000473252 PHLDA3Q9Y5J5 127 aa8.65□□□□□ -1.02
C9orf85-204ENST00000473252 LOC100131303A0A0U1RQF7 123 aa8.64□□□□□ -1.03
C9orf85-204ENST00000473252 PDE6DO43924 150 aa8.64□□□□□ -1.03
C9orf85-204ENST00000473252 UFSP1Q6NVU6 142 aa8.64□□□□□ -1.03
C9orf85-204ENST00000473252 ZNF575Q86XF7 245 aa8.64□□□□□ -1.03
C9orf85-204ENST00000473252 ZFP82Q8N141 532 aa8.64□□□□□ -1.03
C9orf85-204ENST00000473252 SFRP2Q96HF1 295 aa8.64□□□□□ -1.03
C9orf85-204ENST00000473252 IGHV3-73A0A0B4J1V6 119 aa8.63□□□□□ -1.03
C9orf85-204ENST00000473252 TRAV8-6A0A0B4J262 113 aa8.63□□□□□ -1.03
C9orf85-204ENST00000473252 RPL35P42766 123 aaKnown RBP8.63□□□□□ -1.03
C9orf85-204ENST00000473252 LINC00315P59091 139 aa8.63□□□□□ -1.03
C9orf85-204ENST00000473252 CCL20P78556 96 aa8.63□□□□□ -1.03
C9orf85-204ENST00000473252 MEF2BQ02080 365 aaPredicted RBP8.63□□□□□ -1.03
C9orf85-204ENST00000473252 ATP6V0E2Q8NHE4 81 aa8.63□□□□□ -1.03
C9orf85-204ENST00000473252 IGHV3-38A0A0C4DH36 116 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms