RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 RPL7L1Q6DKI1 246 aaKnown RBP10.32□□□□□ -0.76
VTI1A-203ENST00000472892 C10orf126Q8N4M7 172 aa10.32□□□□□ -0.76
VTI1A-203ENST00000472892 NHLRC2Q8NBF2 726 aa10.32□□□□□ -0.76
VTI1A-203ENST00000472892 PGPEP1LA6NFU8 196 aa10.31□□□□□ -0.76
VTI1A-203ENST00000472892 RNASE3P12724 160 aaKnown RBP10.31□□□□□ -0.76
VTI1A-203ENST00000472892 ZFP69Q49AA0 526 aa10.31□□□□□ -0.76
VTI1A-203ENST00000472892 LINC00479Q96M42 142 aa10.31□□□□□ -0.76
VTI1A-203ENST00000472892 PRADC1Q9BSG0 188 aa10.31□□□□□ -0.76
VTI1A-203ENST00000472892 BORCS7-ASMTA0A0B4J1R7 106 aa10.3□□□□□ -0.76
VTI1A-203ENST00000472892 IGHV3-38A0A0C4DH36 116 aa10.3□□□□□ -0.76
VTI1A-203ENST00000472892 PPT1P50897 306 aa10.3□□□□□ -0.76
VTI1A-203ENST00000472892 RHOHQ15669 191 aa10.3□□□□□ -0.76
VTI1A-203ENST00000472892 ZNF726P1Q15940 193 aa10.3□□□□□ -0.76
VTI1A-203ENST00000472892 ZNF506Q5JVG8 444 aa10.3□□□□□ -0.76
VTI1A-203ENST00000472892 IGHV3-73A0A0B4J1V6 119 aa10.29□□□□□ -0.76
VTI1A-203ENST00000472892 IGKV3D-20A0A0C4DH25 116 aa10.29□□□□□ -0.76
VTI1A-203ENST00000472892 CTXND1A0A1B0GTU2 59 aa10.29□□□□□ -0.76
VTI1A-203ENST00000472892 LINC01556Q5JQF7 62 aa10.29□□□□□ -0.76
VTI1A-203ENST00000472892 FXYD6-FXYD2A0A087WZ82 144 aa10.28□□□□□ -0.76
VTI1A-203ENST00000472892 TRAV8-6A0A0B4J262 113 aa10.28□□□□□ -0.76
VTI1A-203ENST00000472892 TRAV34A0A0B4J273 112 aa10.28□□□□□ -0.76
VTI1A-203ENST00000472892 IBA57-AS1B1ANH7 110 aa10.28□□□□□ -0.76
VTI1A-203ENST00000472892 MGST1P10620 155 aaKnown RBP10.28□□□□□ -0.76
VTI1A-203ENST00000472892 XGP55808 180 aa10.28□□□□□ -0.76
VTI1A-203ENST00000472892 OR2T35Q8NGX2 323 aa10.28□□□□□ -0.76
VTI1A-203ENST00000472892 ARL2-SNX15V9GYD0 113 aa10.28□□□□□ -0.76
VTI1A-203ENST00000472892 FABP5P3A8MUU1 101 aa10.27□□□□□ -0.77
VTI1A-203ENST00000472892 IFNA7P01567 189 aa10.27□□□□□ -0.77
VTI1A-203ENST00000472892 KRTAP10-1P60331 282 aa10.27□□□□□ -0.77
VTI1A-203ENST00000472892 PIK3CD-AS1Q5SR53 167 aa10.27□□□□□ -0.77
VTI1A-203ENST00000472892 NKX6-2Q9C056 277 aaPredicted RBP10.27□□□□□ -0.77
VTI1A-203ENST00000472892 FAM74A7A6NL05 159 aa10.26□□□□□ -0.77
VTI1A-203ENST00000472892 G3V3Q6 166 aa10.26□□□□□ -0.77
VTI1A-203ENST00000472892 UBE2G2P60604 165 aa10.26□□□□□ -0.77
VTI1A-203ENST00000472892 OR10J3Q5JRS4 329 aa10.26□□□□□ -0.77
VTI1A-203ENST00000472892 LELP1Q5T871 98 aa10.26□□□□□ -0.77
VTI1A-203ENST00000472892 ZFP2Q6ZN57 461 aa10.26□□□□□ -0.77
VTI1A-203ENST00000472892 Q6ZSN1 163 aa10.26□□□□□ -0.77
VTI1A-203ENST00000472892 ATP6V0E2Q8NHE4 81 aa10.26□□□□□ -0.77
VTI1A-203ENST00000472892 HIST1H2BAQ96A08 127 aa10.26□□□□□ -0.77
VTI1A-203ENST00000472892 GTSF1LQ9H1H1 148 aa10.26□□□□□ -0.77
VTI1A-203ENST00000472892 LRCOL1A6NCL2 159 aa10.25□□□□□ -0.77
VTI1A-203ENST00000472892 A8MWV9 139 aa10.25□□□□□ -0.77
VTI1A-203ENST00000472892 PEX7O00628 323 aa10.25□□□□□ -0.77
VTI1A-203ENST00000472892 CRIP1P50238 77 aa10.25□□□□□ -0.77
VTI1A-203ENST00000472892 AKR1C8PQ5T2L2 129 aa10.25□□□□□ -0.77
VTI1A-203ENST00000472892 COX8CQ7Z4L0 72 aa10.25□□□□□ -0.77
VTI1A-203ENST00000472892 PARLQ9H300 379 aa10.25□□□□□ -0.77
VTI1A-203ENST00000472892 EPM2AB3EWF7 344 aa10.24□□□□□ -0.77
VTI1A-203ENST00000472892 S100A4P26447 101 aaKnown RBP10.24□□□□□ -0.77
VTI1A-203ENST00000472892 ASIPP42127 132 aa10.24□□□□□ -0.77
VTI1A-203ENST00000472892 FGF8P55075 233 aaPredicted RBP10.24□□□□□ -0.77
VTI1A-203ENST00000472892 DNLZQ5SXM8 178 aa10.24□□□□□ -0.77
VTI1A-203ENST00000472892 Q86TA4 180 aa10.24□□□□□ -0.77
VTI1A-203ENST00000472892 CYTL1Q9NRR1 136 aa10.24□□□□□ -0.77
VTI1A-203ENST00000472892 IL36BQ9NZH7 164 aa10.24□□□□□ -0.77
VTI1A-203ENST00000472892 ZFP30Q9Y2G7 519 aa10.24□□□□□ -0.77
VTI1A-203ENST00000472892 PSCAO43653 123 aa10.23□□□□□ -0.77
VTI1A-203ENST00000472892 LINC00694P0DN24 101 aa10.23□□□□□ -0.77
VTI1A-203ENST00000472892 GCSHP23434 173 aa10.23□□□□□ -0.77
VTI1A-203ENST00000472892 LGALSLQ3ZCW2 172 aaPredicted RBP10.23□□□□□ -0.77
VTI1A-203ENST00000472892 UFSP1Q6NVU6 142 aa10.23□□□□□ -0.77
VTI1A-203ENST00000472892 FAT1Q14517 4588 aa10.22□□□□□ -0.77
VTI1A-203ENST00000472892 B4DEV8 164 aa10.22□□□□□ -0.77
VTI1A-203ENST00000472892 KRBOX1C9JBD0 128 aa10.22□□□□□ -0.77
VTI1A-203ENST00000472892 ARPC5O15511 151 aa10.22□□□□□ -0.77
VTI1A-203ENST00000472892 IGHV3-30P01768 117 aa10.22□□□□□ -0.77
VTI1A-203ENST00000472892 IGHV3-33P01772 117 aa10.22□□□□□ -0.77
VTI1A-203ENST00000472892 IGHV3-30-3P0DP02 117 aa10.22□□□□□ -0.77
VTI1A-203ENST00000472892 IGHV3-30-5P0DP03 117 aa10.22□□□□□ -0.77
VTI1A-203ENST00000472892 ZC2HC1AQ96GY0 325 aa10.22□□□□□ -0.77
VTI1A-203ENST00000472892 SAMD10Q9BYL1 202 aa10.22□□□□□ -0.77
VTI1A-203ENST00000472892 JPT2Q9H910 190 aa10.22□□□□□ -0.77
VTI1A-203ENST00000472892 TRBV6-1A0A0K0K1D8 114 aa10.21□□□□□ -0.77
VTI1A-203ENST00000472892 LOC100996750A0A140TA64 210 aa10.21□□□□□ -0.77
VTI1A-203ENST00000472892 MAP1LC3B2A6NCE7 125 aa10.21□□□□□ -0.77
VTI1A-203ENST00000472892 FHITP49789 147 aa10.21□□□□□ -0.77
VTI1A-203ENST00000472892 LAGE3Q14657 143 aa10.21□□□□□ -0.77
VTI1A-203ENST00000472892 NTN5Q8WTR8 489 aaPredicted RBP10.21□□□□□ -0.77
VTI1A-203ENST00000472892 KRTAP4-6Q9BYQ5 205 aa10.21□□□□□ -0.77
VTI1A-203ENST00000472892 MAP1LC3BQ9GZQ8 125 aa10.21□□□□□ -0.77
VTI1A-203ENST00000472892 Q9UF83 564 aa10.21□□□□□ -0.77
VTI1A-203ENST00000472892 GAGE12JA6NER3 117 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 H3BVH4 76 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 SH2D1AO60880 128 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 ARMS2P0C7Q2 107 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 GAGE1Q13065 139 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 GAGE4Q13068 117 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 GAGE5Q13069 117 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 ZNF674Q2M3X9 581 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 RGS21Q2M5E4 152 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 GAGE13Q4V321 117 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 FAM162BQ5T6X4 162 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 FMC1Q96HJ9 113 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 TCEAL7Q9BRU2 100 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 Q9HAA7 133 aa10.2□□□□□ -0.78
VTI1A-203ENST00000472892 IGLV5-52A0A0A0MRZ9 124 aa10.19□□□□□ -0.78
VTI1A-203ENST00000472892 M0R036 132 aa10.19□□□□□ -0.78
VTI1A-203ENST00000472892 LTAP01374 205 aa10.19□□□□□ -0.78
VTI1A-203ENST00000472892 C14orf178Q8N769 122 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms