RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 ZNF493Q6ZR52 646 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 Q86TA4 180 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 EIF4E3Q8N5X7 224 aaKnown RBP4.76□□□□□ -1.65
SCN9A-206ENST00000472119 NHLRC2Q8NBF2 726 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 LYPD6BQ8NI32 183 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 RNASE8Q8TDE3 154 aaKnown RBP4.76□□□□□ -1.65
SCN9A-206ENST00000472119 C2CD4CQ8TF44 421 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 TMEM263Q8WUH6 116 aaKnown RBP4.76□□□□□ -1.65
SCN9A-206ENST00000472119 C16orf74Q96GX8 76 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 FMC1Q96HJ9 113 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 TCEAL7Q9BRU2 100 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 GSN-AS1Q9NRJ2 163 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 VAX2Q9UIW0 290 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 DNAH7Q8WXX0 4024 aa4.76□□□□□ -1.65
SCN9A-206ENST00000472119 A0A087WWL8 130 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 TRAV21A0A0B4J279 112 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 RAB19A4D1S5 217 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 RBFOX3A6NFN3 312 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 C3orf84H3BNL1 204 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 GNRH2O43555 120 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 LTAP01374 205 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 DEFB130BP0DP73 79 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 DEFB130AP0DP74 79 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 RPL35P42766 123 aaKnown RBP4.75□□□□□ -1.65
SCN9A-206ENST00000472119 CRIP1P50238 77 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 ODF1Q14990 250 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 ANXA2RQ3ZCQ2 193 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 CASC10Q5T4H9 136 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 FAM159AQ6UWV7 190 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 BAGE2Q86Y30 109 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 TMEM183AQ8IXX5 376 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 C11orf72Q8NBR9 251 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 PHLDA1Q8WV24 401 aaPredicted RBP4.75□□□□□ -1.65
SCN9A-206ENST00000472119 ZC2HC1AQ96GY0 325 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 TXNDC17Q9BRA2 123 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 LINC00467Q9BRT7 94 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 DERL1Q9BUN8 251 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 NOP10Q9NPE3 64 aaKnown RBP4.75□□□□□ -1.65
SCN9A-206ENST00000472119 MED9Q9NWA0 146 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 ZFP30Q9Y2G7 519 aa4.75□□□□□ -1.65
SCN9A-206ENST00000472119 TRBV6-1A0A0K0K1D8 114 aa4.74□□□□□ -1.65
SCN9A-206ENST00000472119 FABP5P3A8MUU1 101 aa4.74□□□□□ -1.65
SCN9A-206ENST00000472119 SNURFLB1AK76 121 aa4.74□□□□□ -1.65
SCN9A-206ENST00000472119 PDE6DO43924 150 aa4.74□□□□□ -1.65
SCN9A-206ENST00000472119 S100A9P06702 114 aaKnown RBP4.74□□□□□ -1.65
SCN9A-206ENST00000472119 PFN1P07737 140 aaKnown RBP4.74□□□□□ -1.65
SCN9A-206ENST00000472119 HTN3P15516 51 aa4.74□□□□□ -1.65
SCN9A-206ENST00000472119 TAGLN2P37802 199 aaKnown RBP4.74□□□□□ -1.65
SCN9A-206ENST00000472119 DAD1P61803 113 aa4.74□□□□□ -1.65
SCN9A-206ENST00000472119 ZNF506Q5JVG8 444 aa4.74□□□□□ -1.65
SCN9A-206ENST00000472119 C11orf52Q96A22 123 aa4.74□□□□□ -1.65
SCN9A-206ENST00000472119 EIF5A2Q9GZV4 153 aaKnown RBP4.74□□□□□ -1.65
SCN9A-206ENST00000472119 TIMM8BQ9Y5J9 83 aaPredicted RBP4.74□□□□□ -1.65
SCN9A-206ENST00000472119 IGKV3D-20A0A0C4DH25 116 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 PGPEP1LA6NFU8 196 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 LYRM9A8MSI8 78 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 M0R036 132 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 SH2D1AO60880 128 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 GAGE7O76087 117 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 ORM1P02763 201 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 TYMSP04818 313 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 GAGE12FP0CL80 117 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 GAGE12GP0CL81 117 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 GAGE12IP0CL82 117 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 CEBPGP53567 150 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 TCL1AP56279 114 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 IFITM2Q01629 132 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 ZNF674Q2M3X9 581 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 TDRG1Q3Y452 100 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 CENPWQ5EE01 88 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 FAM162BQ5T6X4 162 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 CEMP1Q6PRD7 247 aaPredicted RBP4.73□□□□□ -1.65
SCN9A-206ENST00000472119 Q6ZTI0 123 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 COX8CQ7Z4L0 72 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 KCNS1Q96KK3 526 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 FAM210AQ96ND0 272 aa4.73□□□□□ -1.65
SCN9A-206ENST00000472119 TMSB15BA0A087X1C1 80 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 DEFB131BA0A096LNP1 70 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 TRGV1A0A0A0MS02 117 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 TRAV10A0A0B4J240 114 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 IGHV3-16A0A0C4DH30 117 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 TEX48A0A1B0GUV7 120 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 KRBOX1C9JBD0 128 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 IGLV2-8P01709 118 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 MGST1P10620 155 aaKnown RBP4.72□□□□□ -1.65
SCN9A-206ENST00000472119 GNG4P50150 75 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 ZNF415Q09FC8 603 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 DAZ2Q13117 558 aaKnown RBP4.72□□□□□ -1.65
SCN9A-206ENST00000472119 PIK3CD-AS1Q5SR53 167 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 IBA57Q5T440 356 aaKnown RBP4.72□□□□□ -1.65
SCN9A-206ENST00000472119 PRR27Q6MZM9 219 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 PRR26Q8N8Z3 221 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 SDF2L1Q9HCN8 221 aa4.72□□□□□ -1.65
SCN9A-206ENST00000472119 MRPL16Q9NX20 251 aaKnown RBP4.72□□□□□ -1.65
SCN9A-206ENST00000472119 TRBV20OR9-2A0A075B6H5 130 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 TRGV2A0A075B6R0 118 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 GRIFINA4D1Z8 144 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 NUPR2A6NF83 97 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 B4DEV8 164 aa4.71□□□□□ -1.66
SCN9A-206ENST00000472119 IGLL5B9A064 214 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms