RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 RNASE3P12724 160 aaKnown RBP15.18■□□□□ 0.02
C9orf3-213ENST00000471978 LINC01556Q5JQF7 62 aa15.18■□□□□ 0.02
C9orf3-213ENST00000471978 OR10J3Q5JRS4 329 aa15.18■□□□□ 0.02
C9orf3-213ENST00000471978 TRAV34A0A0B4J273 112 aa15.17■□□□□ 0.02
C9orf3-213ENST00000471978 ZNF726P1Q15940 193 aa15.17■□□□□ 0.02
C9orf3-213ENST00000471978 IFNA7P01567 189 aa15.16■□□□□ 0.02
C9orf3-213ENST00000471978 KRTAP10-1P60331 282 aa15.16■□□□□ 0.02
C9orf3-213ENST00000471978 ARL2-SNX15V9GYD0 113 aa15.16■□□□□ 0.02
C9orf3-213ENST00000471978 CTXND1A0A1B0GTU2 59 aa15.15■□□□□ 0.02
C9orf3-213ENST00000471978 PSCAO43653 123 aa15.15■□□□□ 0.02
C9orf3-213ENST00000471978 MGST1P10620 155 aaKnown RBP15.15■□□□□ 0.02
C9orf3-213ENST00000471978 XGP55808 180 aa15.15■□□□□ 0.02
C9orf3-213ENST00000471978 UBE2G2P60604 165 aa15.15■□□□□ 0.02
C9orf3-213ENST00000471978 BOLA1Q9Y3E2 137 aa15.15■□□□□ 0.02
C9orf3-213ENST00000471978 FAT1Q14517 4588 aa15.15■□□□□ 0.02
C9orf3-213ENST00000471978 IGKV3D-20A0A0C4DH25 116 aa15.14■□□□□ 0.01
C9orf3-213ENST00000471978 IBA57-AS1B1ANH7 110 aa15.14■□□□□ 0.01
C9orf3-213ENST00000471978 EPM2AB3EWF7 344 aa15.14■□□□□ 0.01
C9orf3-213ENST00000471978 S100A4P26447 101 aaKnown RBP15.14■□□□□ 0.01
C9orf3-213ENST00000471978 LELP1Q5T871 98 aa15.14■□□□□ 0.01
C9orf3-213ENST00000471978 OR2T35Q8NGX2 323 aa15.14■□□□□ 0.01
C9orf3-213ENST00000471978 FABP5P3A8MUU1 101 aa15.13■□□□□ 0.01
C9orf3-213ENST00000471978 ATP6V0E2Q8NHE4 81 aa15.13■□□□□ 0.01
C9orf3-213ENST00000471978 GTSF1LQ9H1H1 148 aa15.13■□□□□ 0.01
C9orf3-213ENST00000471978 PEX7O00628 323 aa15.12■□□□□ 0.01
C9orf3-213ENST00000471978 IGHV3-30P01768 117 aa15.12■□□□□ 0.01
C9orf3-213ENST00000471978 IGHV3-33P01772 117 aa15.12■□□□□ 0.01
C9orf3-213ENST00000471978 IGHV3-30-3P0DP02 117 aa15.12■□□□□ 0.01
C9orf3-213ENST00000471978 IGHV3-30-5P0DP03 117 aa15.12■□□□□ 0.01
C9orf3-213ENST00000471978 GCSHP23434 173 aa15.12■□□□□ 0.01
C9orf3-213ENST00000471978 ASIPP42127 132 aa15.12■□□□□ 0.01
C9orf3-213ENST00000471978 FGF8P55075 233 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-213ENST00000471978 LGALSLQ3ZCW2 172 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-213ENST00000471978 AKR1C8PQ5T2L2 129 aa15.12■□□□□ 0.01
C9orf3-213ENST00000471978 Q6ZSN1 163 aa15.12■□□□□ 0.01
C9orf3-213ENST00000471978 PARLQ9H300 379 aa15.12■□□□□ 0.01
C9orf3-213ENST00000471978 Q9HAA7 133 aa15.12■□□□□ 0.01
C9orf3-213ENST00000471978 FAM74A7A6NL05 159 aa15.11■□□□□ 0.01
C9orf3-213ENST00000471978 A8MWV9 139 aa15.11■□□□□ 0.01
C9orf3-213ENST00000471978 ZFP2Q6ZN57 461 aa15.11■□□□□ 0.01
C9orf3-213ENST00000471978 Q86TA4 180 aa15.11■□□□□ 0.01
C9orf3-213ENST00000471978 NKX6-2Q9C056 277 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-213ENST00000471978 LRCOL1A6NCL2 159 aa15.1■□□□□ 0.01
C9orf3-213ENST00000471978 PIK3CD-AS1Q5SR53 167 aa15.1■□□□□ 0.01
C9orf3-213ENST00000471978 HIST1H2BAQ96A08 127 aa15.1■□□□□ 0.01
C9orf3-213ENST00000471978 B4DEV8 164 aa15.09■□□□□ 0.01
C9orf3-213ENST00000471978 IL36BQ9NZH7 164 aa15.09■□□□□ 0.01
C9orf3-213ENST00000471978 GAGE12JA6NER3 117 aa15.08■□□□□ 0
C9orf3-213ENST00000471978 GAGE1Q13065 139 aa15.08■□□□□ 0
C9orf3-213ENST00000471978 GAGE4Q13068 117 aa15.08■□□□□ 0
C9orf3-213ENST00000471978 GAGE5Q13069 117 aa15.08■□□□□ 0
C9orf3-213ENST00000471978 GAGE13Q4V321 117 aa15.08■□□□□ 0
C9orf3-213ENST00000471978 IGLV5-52A0A0A0MRZ9 124 aa15.07■□□□□ 0
C9orf3-213ENST00000471978 G3V3Q6 166 aa15.07■□□□□ 0
C9orf3-213ENST00000471978 H3BVH4 76 aa15.07■□□□□ 0
C9orf3-213ENST00000471978 CRIP1P50238 77 aa15.07■□□□□ 0
C9orf3-213ENST00000471978 ZC2HC1AQ96GY0 325 aa15.07■□□□□ 0
C9orf3-213ENST00000471978 JPT2Q9H910 190 aa15.07■□□□□ 0
C9orf3-213ENST00000471978 MAP1LC3B2A6NCE7 125 aa15.06■□□□□ 0
C9orf3-213ENST00000471978 KRBOX1C9JBD0 128 aa15.06■□□□□ 0
C9orf3-213ENST00000471978 M0R036 132 aa15.06■□□□□ 0
C9orf3-213ENST00000471978 ARPC5O15511 151 aa15.06■□□□□ 0
C9orf3-213ENST00000471978 NTN5Q8WTR8 489 aaPredicted RBP15.06■□□□□ 0
C9orf3-213ENST00000471978 SAMD10Q9BYL1 202 aa15.06■□□□□ 0
C9orf3-213ENST00000471978 MAP1LC3BQ9GZQ8 125 aa15.06■□□□□ 0
C9orf3-213ENST00000471978 CYTL1Q9NRR1 136 aa15.06■□□□□ 0
C9orf3-213ENST00000471978 ZFP30Q9Y2G7 519 aa15.06■□□□□ 0
C9orf3-213ENST00000471978 SH2D1AO60880 128 aa15.05■□□□□ -0
C9orf3-213ENST00000471978 LINC00694P0DN24 101 aa15.05■□□□□ -0
C9orf3-213ENST00000471978 DMRTA1Q5VZB9 504 aa15.05■□□□□ -0
C9orf3-213ENST00000471978 UFSP1Q6NVU6 142 aa15.05■□□□□ -0
C9orf3-213ENST00000471978 SYT8Q8NBV8 401 aa15.05■□□□□ -0
C9orf3-213ENST00000471978 FMC1Q96HJ9 113 aa15.05■□□□□ -0
C9orf3-213ENST00000471978 GRIFINA4D1Z8 144 aa15.04■□□□□ -0
C9orf3-213ENST00000471978 ARMS2P0C7Q2 107 aa15.04■□□□□ -0
C9orf3-213ENST00000471978 UBE2G1P62253 170 aa15.04■□□□□ -0
C9orf3-213ENST00000471978 LAGE3Q14657 143 aa15.04■□□□□ -0
C9orf3-213ENST00000471978 DNLZQ5SXM8 178 aa15.04■□□□□ -0
C9orf3-213ENST00000471978 FAM162BQ5T6X4 162 aa15.04■□□□□ -0
C9orf3-213ENST00000471978 Q5VSD8 79 aa15.04■□□□□ -0
C9orf3-213ENST00000471978 COX8CQ7Z4L0 72 aa15.04■□□□□ -0
C9orf3-213ENST00000471978 Q8N3U1 123 aa15.04■□□□□ -0
C9orf3-213ENST00000471978 C14orf178Q8N769 122 aaPredicted RBP15.04■□□□□ -0
C9orf3-213ENST00000471978 Q8N814 137 aa15.04■□□□□ -0
C9orf3-213ENST00000471978 FRZBQ92765 325 aa15.04■□□□□ -0
C9orf3-213ENST00000471978 Q9UF83 564 aa15.04■□□□□ -0
C9orf3-213ENST00000471978 SRRM2Q9UQ35 2752 aaKnown RBP15.04■□□□□ -0
C9orf3-213ENST00000471978 VPS13BQ7Z7G8 4022 aa15.04■□□□□ -0
C9orf3-213ENST00000471978 RGS21Q2M5E4 152 aa15.03■□□□□ -0
C9orf3-213ENST00000471978 OR11H4Q8NGC9 324 aa15.03■□□□□ -0
C9orf3-213ENST00000471978 TM2D2Q9BX73 214 aa15.03■□□□□ -0
C9orf3-213ENST00000471978 INAFM2P0DMQ5 153 aa15.02■□□□□ -0
C9orf3-213ENST00000471978 CST9LP1Q5W188 147 aa15.02■□□□□ -0
C9orf3-213ENST00000471978 STOML3Q8TAV4 291 aa15.02■□□□□ -0
C9orf3-213ENST00000471978 HERC1Q15751 4861 aa15.01□□□□□ -0.01
C9orf3-213ENST00000471978 RHODO00212 210 aa15.01□□□□□ -0.01
C9orf3-213ENST00000471978 SMR3BP02814 79 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-213ENST00000471978 FHITP49789 147 aa15.01□□□□□ -0.01
C9orf3-213ENST00000471978 FAM74A4Q5TZK3 123 aa15.01□□□□□ -0.01
C9orf3-213ENST00000471978 TCEAL7Q9BRU2 100 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 341.3 ms