RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 TTC32Q5I0X7 151 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 TOMM20LQ6UXN7 152 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 AMN1Q8IY45 258 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 C3orf22Q8N5N4 141 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 OR51H1Q8NH63 302 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 ZFAND1Q8TCF1 268 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 GPX8Q8TED1 209 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 DCANP1Q8TF63 244 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 FXYD6Q9H0Q3 95 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 MS4A6AQ9H2W1 248 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 TXNL4BQ9NX01 149 aaKnown RBP1.89□□□□□ -2.11
HDAC9-221ENST00000471887 FKBP11Q9NYL4 201 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 TMEM189A5PLL7 270 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 SMIM9A6NGZ8 99 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 ZNF705FA8MVS1 300 aaPredicted RBP1.88□□□□□ -2.11
HDAC9-221ENST00000471887 GNG7O60262 68 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 SNAPC5O75971 98 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 MT-CO2P00403 227 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 IGLC1P0CG04 106 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 ZNF705DP0CH99 300 aaPredicted RBP1.88□□□□□ -2.11
HDAC9-221ENST00000471887 ZNF705BP0CI00 300 aaPredicted RBP1.88□□□□□ -2.11
HDAC9-221ENST00000471887 SDC2P34741 201 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 G6PCP35575 357 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 LPAR6P43657 344 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 FXYD4P59646 89 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 DEFB131AP59861 70 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 HSPE1P61604 102 aaKnown RBP1.88□□□□□ -2.11
HDAC9-221ENST00000471887 C12orf74Q32Q52 190 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 LPCAT3Q6P1A2 487 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 ZNF705AQ6ZN79 300 aaPredicted RBP1.88□□□□□ -2.11
HDAC9-221ENST00000471887 FAM24BQ8N5W8 94 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 OR5H6Q8NGV6 325 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 OR4X1Q8NH49 305 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 BAALCQ8WXS3 180 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 VCX3BQ9H321 246 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 DIABLOQ9NR28 239 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 SSR3Q9UNL2 185 aa1.88□□□□□ -2.11
HDAC9-221ENST00000471887 PUS1Q9Y606 427 aaKnown RBP eCLIP1.88□□□□□ -2.11
HDAC9-221ENST00000471887 MYCBP2O75592 4640 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 TRAV30A0A087WSZ9 112 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 DEFB131BA0A096LNP1 70 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 IGHV3-21A0A0B4J1V1 117 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 A0A1W2PNM2 257 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 A8MTW9 85 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 H3BMM0 161 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 K7ERS5 55 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 DEFB4AO15263 64 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 GSTZ1O43708 216 aaPredicted RBP1.87□□□□□ -2.11
HDAC9-221ENST00000471887 IGKV1-5P01602 117 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 HLA-DRB4P13762 266 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 NPPCP23582 126 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 PSMB9P28065 219 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 S100GP29377 79 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 RCVRNP35243 200 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 NUP62P37198 522 aaPredicted RBP1.87□□□□□ -2.11
HDAC9-221ENST00000471887 EIF2B2P49770 351 aaKnown RBP1.87□□□□□ -2.11
HDAC9-221ENST00000471887 AP2S1P53680 142 aaPredicted RBP1.87□□□□□ -2.11
HDAC9-221ENST00000471887 TAS2R20P59543 309 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 YPEL3P61236 119 aaPredicted RBP1.87□□□□□ -2.11
HDAC9-221ENST00000471887 ERHP84090 104 aaKnown RBP1.87□□□□□ -2.11
HDAC9-221ENST00000471887 UBE2NLQ5JXB2 153 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 IZUMO2Q6UXV1 221 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 PRNTQ86SH4 94 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 LHFPL1Q86WI0 220 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 CNBD2Q96M20 576 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 C20orf166-AS1Q96NR2 134 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 METTL26Q96S19 204 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 HINT2Q9BX68 163 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 SRRQ9GZT4 340 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 IFT46Q9NQC8 304 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 MRPL36Q9P0J6 103 aaKnown RBP1.87□□□□□ -2.11
HDAC9-221ENST00000471887 CRCT1Q9UGL9 99 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 HLA-DRB4X5D2U9 266 aa1.87□□□□□ -2.11
HDAC9-221ENST00000471887 DMBT1Q9UGM3 2413 aaPredicted RBP1.87□□□□□ -2.11
HDAC9-221ENST00000471887 HMCN2Q8NDA2 5059 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 IGKV3-7A0A075B6H7 116 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 A0A0B4J2C4 111 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 KNCNA6PVL3 124 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 CENPXA8MT69 81 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 K7EPK0 472 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 ATG12O94817 140 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 APOA1P02647 267 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 PMP2P02689 132 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 SPART-AS1P0CW21 52 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 SLC25A4P12235 298 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 HTR2BP41595 481 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 PSMB3P49720 205 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 SNRPD3P62318 126 aaKnown RBP1.86□□□□□ -2.11
HDAC9-221ENST00000471887 DHRS2Q13268 280 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 USF2Q15853 346 aaPredicted RBP1.86□□□□□ -2.11
HDAC9-221ENST00000471887 NMSQ5H8A3 153 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 PSMG4Q5JS54 123 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 ACTL10Q5JWF8 245 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 IDNKQ5T6J7 187 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 C1orf134Q5TEV5 83 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 SAMD13Q5VXD3 122 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 SPATA31B1PQ5VZV4 182 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 FOXI2Q6ZQN5 318 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 LINC00337Q8N6G1 96 aa1.86□□□□□ -2.11
HDAC9-221ENST00000471887 C15orf53Q8NAA6 179 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms