RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 GVQW2A0A096LPI5 108 aaPredicted RBP-0.45□□□□□ -2.48
RBM39-228ENST00000471635 TRAV17A0A0B4J275 112 aa-0.45□□□□□ -2.48
RBM39-228ENST00000471635 PGRMC1O00264 195 aaKnown RBP-0.45□□□□□ -2.48
RBM39-228ENST00000471635 PCBD1P61457 104 aa-0.45□□□□□ -2.48
RBM39-228ENST00000471635 BET1LQ9NYM9 111 aa-0.45□□□□□ -2.48
RBM39-228ENST00000471635 HELZP42694 1942 aaKnown RBP-0.45□□□□□ -2.48
RBM39-228ENST00000471635 VIRMAQ69YN4 1812 aaKnown RBP-0.45□□□□□ -2.48
RBM39-228ENST00000471635 PNMA8CA0A1B0GUJ8 204 aa-0.46□□□□□ -2.48
RBM39-228ENST00000471635 IFNA21P01568 189 aa-0.46□□□□□ -2.48
RBM39-228ENST00000471635 TCRAP04437 139 aa-0.46□□□□□ -2.48
RBM39-228ENST00000471635 NMBP08949 121 aa-0.46□□□□□ -2.48
RBM39-228ENST00000471635 PPP1R2P3Q6NXS1 205 aa-0.46□□□□□ -2.48
RBM39-228ENST00000471635 NDUFAF1Q9Y375 327 aa-0.46□□□□□ -2.48
RBM39-228ENST00000471635 MED23Q9ULK4 1368 aa-0.46□□□□□ -2.48
RBM39-228ENST00000471635 ARHGAP31Q2M1Z3 1444 aa-0.47□□□□□ -2.48
RBM39-228ENST00000471635 SSC5DA1L4H1 1573 aa-0.47□□□□□ -2.48
RBM39-228ENST00000471635 ZNF670-ZNF695F2Z2N8 137 aa-0.47□□□□□ -2.48
RBM39-228ENST00000471635 PPP1R1CQ8WVI7 109 aa-0.47□□□□□ -2.48
RBM39-228ENST00000471635 PPDPFLQ8WWR9 84 aa-0.47□□□□□ -2.48
RBM39-228ENST00000471635 CCDC115Q96NT0 180 aa-0.47□□□□□ -2.48
RBM39-228ENST00000471635 METTL1Q9UBP6 276 aaKnown RBP-0.47□□□□□ -2.48
RBM39-228ENST00000471635 SPTBN2O15020 2390 aa-0.47□□□□□ -2.49
RBM39-228ENST00000471635 TENM4Q6N022 2769 aa-0.47□□□□□ -2.49
RBM39-228ENST00000471635 PTPN13Q12923 2485 aa-0.47□□□□□ -2.49
RBM39-228ENST00000471635 AKAP6Q13023 2319 aa-0.48□□□□□ -2.49
RBM39-228ENST00000471635 PTPRQQ9UMZ3 2332 aa-0.48□□□□□ -2.49
RBM39-228ENST00000471635 HSPG2P98160 4391 aa-0.48□□□□□ -2.49
RBM39-228ENST00000471635 A0A087WTM6 91 aa-0.48□□□□□ -2.49
RBM39-228ENST00000471635 APOC1P02654 83 aa-0.48□□□□□ -2.49
RBM39-228ENST00000471635 AKR1D1P51857 326 aa-0.48□□□□□ -2.49
RBM39-228ENST00000471635 HSD17B12Q53GQ0 312 aa-0.48□□□□□ -2.49
RBM39-228ENST00000471635 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.48□□□□□ -2.49
RBM39-228ENST00000471635 SLC25A26Q70HW3 274 aa-0.48□□□□□ -2.49
RBM39-228ENST00000471635 OR9Q1Q8NGQ5 310 aa-0.48□□□□□ -2.49
RBM39-228ENST00000471635 SMPXQ9UHP9 88 aa-0.48□□□□□ -2.49
RBM39-228ENST00000471635 PLXNA2O75051 1894 aa-0.48□□□□□ -2.49
RBM39-228ENST00000471635 C10orf142B7Z368 130 aa-0.49□□□□□ -2.49
RBM39-228ENST00000471635 IFITM1P13164 125 aa-0.49□□□□□ -2.49
RBM39-228ENST00000471635 PLGLB1Q02325 96 aa-0.49□□□□□ -2.49
RBM39-228ENST00000471635 OR2T2Q6IF00 324 aa-0.49□□□□□ -2.49
RBM39-228ENST00000471635 TOMM20LQ6UXN7 152 aa-0.49□□□□□ -2.49
RBM39-228ENST00000471635 SMIM11BQ8TCY0 68 aa-0.49□□□□□ -2.49
RBM39-228ENST00000471635 LRP2P98164 4655 aa-0.49□□□□□ -2.49
RBM39-228ENST00000471635 CSMD3Q7Z407 3707 aa-0.49□□□□□ -2.49
RBM39-228ENST00000471635 FAM208BQ5VWN6 2430 aa-0.49□□□□□ -2.49
RBM39-228ENST00000471635 A0A1B0GW64 132 aa-0.5□□□□□ -2.49
RBM39-228ENST00000471635 HIST1H1BP16401 226 aaKnown RBP-0.5□□□□□ -2.49
RBM39-228ENST00000471635 PSPHP78330 225 aa-0.5□□□□□ -2.49
RBM39-228ENST00000471635 SAMD13Q5VXD3 122 aa-0.5□□□□□ -2.49
RBM39-228ENST00000471635 VPS25Q9BRG1 176 aa-0.5□□□□□ -2.49
RBM39-228ENST00000471635 SLC35B3Q9H1N7 401 aa-0.5□□□□□ -2.49
RBM39-228ENST00000471635 TAS2R8Q9NYW2 309 aa-0.5□□□□□ -2.49
RBM39-228ENST00000471635 STAB1Q9NY15 2570 aa-0.5□□□□□ -2.49
RBM39-228ENST00000471635 PTPRMP28827 1452 aa-0.5□□□□□ -2.49
RBM39-228ENST00000471635 KDM5CP41229 1560 aa-0.5□□□□□ -2.49
RBM39-228ENST00000471635 CASZ1Q86V15 1759 aa-0.5□□□□□ -2.49
RBM39-228ENST00000471635 DOCK11Q5JSL3 2073 aa-0.5□□□□□ -2.49
RBM39-228ENST00000471635 TCRBV3S1A0A5B6 114 aa-0.51□□□□□ -2.49
RBM39-228ENST00000471635 RBAKDNA6NC62 111 aa-0.51□□□□□ -2.49
RBM39-228ENST00000471635 LAMB1P07942 1786 aa-0.51□□□□□ -2.49
RBM39-228ENST00000471635 KIAA0100Q14667 2235 aaKnown RBP-0.51□□□□□ -2.49
RBM39-228ENST00000471635 TMEM128Q5BJH2 165 aa-0.51□□□□□ -2.49
RBM39-228ENST00000471635 CCDC171Q6TFL3 1326 aa-0.51□□□□□ -2.49
RBM39-228ENST00000471635 KMT2AQ03164 3969 aa-0.52□□□□□ -2.49
RBM39-228ENST00000471635 ZNF142P52746 1687 aaPredicted RBP-0.52□□□□□ -2.49
RBM39-228ENST00000471635 OVOS2A0A0G2JMS6 1433 aa-0.52□□□□□ -2.49
RBM39-228ENST00000471635 TRAV2A0A0B4J234 112 aa-0.52□□□□□ -2.49
RBM39-228ENST00000471635 A0A1B0GV72 72 aa-0.52□□□□□ -2.49
RBM39-228ENST00000471635 SLC25A6P12236 298 aa-0.52□□□□□ -2.49
RBM39-228ENST00000471635 COX4I1P13073 169 aa-0.52□□□□□ -2.49
RBM39-228ENST00000471635 CCL3L1P16619 93 aa-0.52□□□□□ -2.49
RBM39-228ENST00000471635 TMEM91Q6ZNR0 172 aa-0.52□□□□□ -2.49
RBM39-228ENST00000471635 IFI27L1Q96BM0 104 aa-0.52□□□□□ -2.49
RBM39-228ENST00000471635 Q96NJ1 140 aa-0.52□□□□□ -2.49
RBM39-228ENST00000471635 DNAJC15Q9Y5T4 150 aa-0.52□□□□□ -2.49
RBM39-228ENST00000471635 PLXNA1Q9UIW2 1896 aa-0.52□□□□□ -2.49
RBM39-228ENST00000471635 MUC12Q9UKN1 5478 aa-0.52□□□□□ -2.49
RBM39-228ENST00000471635 DOPEY2Q9Y3R5 2298 aa-0.53□□□□□ -2.49
RBM39-228ENST00000471635 MT-ND4LP03901 98 aa-0.53□□□□□ -2.49
RBM39-228ENST00000471635 APODP05090 189 aa-0.53□□□□□ -2.49
RBM39-228ENST00000471635 NPC2P61916 151 aa-0.53□□□□□ -2.49
RBM39-228ENST00000471635 OR8B8Q15620 311 aa-0.53□□□□□ -2.49
RBM39-228ENST00000471635 CYP2G1PQ6ZSU1 146 aa-0.53□□□□□ -2.49
RBM39-228ENST00000471635 SNX29P2Q8IUI4 249 aa-0.53□□□□□ -2.49
RBM39-228ENST00000471635 TMEM35BQ8NCS4 154 aa-0.53□□□□□ -2.49
RBM39-228ENST00000471635 TMEM242Q9NWH2 141 aa-0.53□□□□□ -2.49
RBM39-228ENST00000471635 XIRP1Q702N8 1843 aaKnown RBP-0.53□□□□□ -2.49
RBM39-228ENST00000471635 PBRM1Q86U86 1689 aa-0.53□□□□□ -2.49
RBM39-228ENST00000471635 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.54□□□□□ -2.5
RBM39-228ENST00000471635 ZNF292O60281 2723 aa-0.54□□□□□ -2.5
RBM39-228ENST00000471635 LPAP08519 4548 aa-0.54□□□□□ -2.5
RBM39-228ENST00000471635 FLNAP21333 2647 aaKnown RBP-0.54□□□□□ -2.5
RBM39-228ENST00000471635 MUC2Q02817 5179 aa-0.54□□□□□ -2.5
RBM39-228ENST00000471635 DPM2O94777 84 aa-0.54□□□□□ -2.5
RBM39-228ENST00000471635 FABP1P07148 127 aa-0.54□□□□□ -2.5
RBM39-228ENST00000471635 TFAMQ00059 246 aaKnown RBP-0.54□□□□□ -2.5
RBM39-228ENST00000471635 NDUFA11Q86Y39 141 aa-0.54□□□□□ -2.5
RBM39-228ENST00000471635 C4orf33Q8N1A6 199 aa-0.54□□□□□ -2.5
RBM39-228ENST00000471635 DYNLRB2Q8TF09 96 aa-0.54□□□□□ -2.5
RBM39-228ENST00000471635 CENPHQ9H3R5 247 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms