RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 SCGB1C1Q8TD33 95 aa3.9□□□□□ -1.79
GPNMB-208ENST00000470994 PHYHIPLQ96FC7 376 aa3.9□□□□□ -1.79
GPNMB-208ENST00000470994 FAM167A-AS1Q96KT0 104 aa3.9□□□□□ -1.79
GPNMB-208ENST00000470994 SPXQ9BT56 116 aa3.9□□□□□ -1.79
GPNMB-208ENST00000470994 NMES1Q9C002 83 aa3.9□□□□□ -1.79
GPNMB-208ENST00000470994 Q9HAA7 133 aa3.9□□□□□ -1.79
GPNMB-208ENST00000470994 ABCA13Q86UQ4 5058 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 IGHV3-73A0A0B4J1V6 119 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 TRAV8-6A0A0B4J262 113 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 IGKV3D-20A0A0C4DH25 116 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 LOC100131303A0A0U1RQF7 123 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 PGPA6NDG6 321 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 UBE2L3P68036 154 aaKnown RBP3.89□□□□□ -1.79
GPNMB-208ENST00000470994 IL15RAQ13261 267 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 ZNF266Q14584 549 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 OR10J3Q5JRS4 329 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 FFAR4Q5NUL3 377 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 MZT2BQ6NZ67 158 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 C10orf126Q8N4M7 172 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 FXYD5Q96DB9 178 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 SMIM3Q9BZL3 60 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 KCNIP2Q9NS61 270 aa3.89□□□□□ -1.79
GPNMB-208ENST00000470994 TRAV4A0A0B4J268 109 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 IGHV3-38A0A0C4DH36 116 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 TRBV7-9A0A0J9YWB2 115 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 RBAKDNA6NC62 111 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 F6UZH7 168 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 M0R2P5 195 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 IGHV3-30P01768 117 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 IGHV3-33P01772 117 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 IGHV3-30-3P0DP02 117 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 IGHV3-30-5P0DP03 117 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 TAS2R45P59539 299 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 FAM74A1Q5RGS3 127 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 GOLT1AQ6ZVE7 132 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 SH2D6Q7Z4S9 175 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 IQCF2Q8IXL9 164 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 OR10G4Q8NGN3 311 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 ENKURQ8TC29 256 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 RASL10AQ92737 203 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 SGK494Q96LW2 274 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 ATP5SQ99766 215 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 PRADC1Q9BSG0 188 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 WDR61Q9GZS3 305 aaKnown RBP3.88□□□□□ -1.79
GPNMB-208ENST00000470994 OR5AC2Q9NZP5 309 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 MBD2Q9UBB5 411 aa3.88□□□□□ -1.79
GPNMB-208ENST00000470994 PKHD1P08F94 4074 aa3.87□□□□□ -1.79
GPNMB-208ENST00000470994 TRAV21A0A0B4J279 112 aa3.87□□□□□ -1.79
GPNMB-208ENST00000470994 A0A1W2PPV4 95 aa3.87□□□□□ -1.79
GPNMB-208ENST00000470994 K7EP13 123 aa3.87□□□□□ -1.79
GPNMB-208ENST00000470994 HMGB3O15347 200 aaKnown RBP3.87□□□□□ -1.79
GPNMB-208ENST00000470994 PFN1P07737 140 aaKnown RBP3.87□□□□□ -1.79
GPNMB-208ENST00000470994 CYCSP99999 105 aaKnown RBP3.87□□□□□ -1.79
GPNMB-208ENST00000470994 KHDC3LQ587J8 217 aa3.87□□□□□ -1.79
GPNMB-208ENST00000470994 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
GPNMB-208ENST00000470994 Q6AWC8 147 aa3.87□□□□□ -1.79
GPNMB-208ENST00000470994 CCDC32Q9BV29 185 aa3.87□□□□□ -1.79
GPNMB-208ENST00000470994 TREM1Q9NP99 234 aa3.87□□□□□ -1.79
GPNMB-208ENST00000470994 OTORQ9NRC9 128 aa3.87□□□□□ -1.79
GPNMB-208ENST00000470994 FLG2Q5D862 2391 aaPredicted RBP3.87□□□□□ -1.79
GPNMB-208ENST00000470994 TRAV8-1A0A0A6YYK1 113 aa3.86□□□□□ -1.79
GPNMB-208ENST00000470994 FBLL1A6NHQ2 334 aaKnown RBP3.86□□□□□ -1.79
GPNMB-208ENST00000470994 SSNA1O43805 119 aa3.86□□□□□ -1.79
GPNMB-208ENST00000470994 TYMSP04818 313 aa3.86□□□□□ -1.79
GPNMB-208ENST00000470994 GATA1P15976 413 aaPredicted RBP3.86□□□□□ -1.79
GPNMB-208ENST00000470994 GNG5P63218 68 aa3.86□□□□□ -1.79
GPNMB-208ENST00000470994 ACOT6Q3I5F7 207 aaPredicted RBP3.86□□□□□ -1.79
GPNMB-208ENST00000470994 ZNF876PQ49A33 203 aa3.86□□□□□ -1.79
GPNMB-208ENST00000470994 ASB13Q8WXK3 278 aa3.86□□□□□ -1.79
GPNMB-208ENST00000470994 KCNS1Q96KK3 526 aa3.86□□□□□ -1.79
GPNMB-208ENST00000470994 NDFIP1Q9BT67 221 aa3.86□□□□□ -1.79
GPNMB-208ENST00000470994 LENEPQ9Y5L5 61 aa3.86□□□□□ -1.79
GPNMB-208ENST00000470994 DMBT1Q9UGM3 2413 aaPredicted RBP3.86□□□□□ -1.79
GPNMB-208ENST00000470994 HSPG2P98160 4391 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 LRP1BQ9NZR2 4599 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 LRCOL1A6NCL2 159 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 IBA57-AS1B1ANH7 110 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 INMT-MINDY4F8WBC2 141 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 LECT2O14960 151 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 RPL12P30050 165 aaKnown RBP3.85□□□□□ -1.79
GPNMB-208ENST00000470994 GAGE1Q13065 139 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 GAGE4Q13068 117 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 GAGE5Q13069 117 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 TDRG1Q3Y452 100 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 LINC01556Q5JQF7 62 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 Q8N814 137 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 SLC25A29Q8N8R3 303 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 ATP6V0E2Q8NHE4 81 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 PPP1R1CQ8WVI7 109 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 TMEM70Q9BUB7 260 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 NDUFA13Q9P0J0 144 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 HSPB11Q9Y547 144 aa3.85□□□□□ -1.79
GPNMB-208ENST00000470994 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.79
GPNMB-208ENST00000470994 PKD1P98161 4303 aa3.84□□□□□ -1.79
GPNMB-208ENST00000470994 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.84□□□□□ -1.79
GPNMB-208ENST00000470994 K7EQM0 130 aa3.84□□□□□ -1.79
GPNMB-208ENST00000470994 TAAR5O14804 337 aa3.84□□□□□ -1.79
GPNMB-208ENST00000470994 RS1O15537 224 aa3.84□□□□□ -1.79
GPNMB-208ENST00000470994 MPC2O95563 127 aa3.84□□□□□ -1.79
GPNMB-208ENST00000470994 GCGP01275 180 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms