RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 STHQ8IWL8 128 aa6.07□□□□□ -1.44
GTF3A-206ENST00000470606 IGHV4-4A0A075B6R2 117 aa6.06□□□□□ -1.44
GTF3A-206ENST00000470606 IGHV1OR15-1A0A075B7D0 117 aa6.06□□□□□ -1.44
GTF3A-206ENST00000470606 NUPR1O60356 82 aa6.06□□□□□ -1.44
GTF3A-206ENST00000470606 APCSP02743 223 aa6.06□□□□□ -1.44
GTF3A-206ENST00000470606 EVI2AP22794 236 aa6.06□□□□□ -1.44
GTF3A-206ENST00000470606 DMRTA1Q5VZB9 504 aa6.06□□□□□ -1.44
GTF3A-206ENST00000470606 FAM159AQ6UWV7 190 aa6.06□□□□□ -1.44
GTF3A-206ENST00000470606 ZNF493Q6ZR52 646 aa6.06□□□□□ -1.44
GTF3A-206ENST00000470606 CSNK1G2-AS1Q8NCQ2 148 aa6.06□□□□□ -1.44
GTF3A-206ENST00000470606 MT-ND6P03923 174 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 HTN1P15515 57 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 ASIPP42127 132 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 NDUFA6P56556 154 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 KRTAP10-11P60412 298 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 RIGQ13278 110 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 TWIST1Q15672 202 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 AMN1Q8IY45 258 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 TMEM256Q8N2U0 113 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 RNF185Q96GF1 192 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 C9orf85Q96MD7 179 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 LOC102724200A0A096LPH7 203 aaPredicted RBP6.05□□□□□ -1.44
GTF3A-206ENST00000470606 AZU1P20160 251 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 SRIP30626 198 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 COX19Q49B96 90 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 ALKBH7Q9BT30 221 aaPredicted RBP6.05□□□□□ -1.44
GTF3A-206ENST00000470606 JPT2Q9H910 190 aa6.05□□□□□ -1.44
GTF3A-206ENST00000470606 M0R381 172 aa6.04□□□□□ -1.44
GTF3A-206ENST00000470606 NXPH4O95158 308 aa6.04□□□□□ -1.44
GTF3A-206ENST00000470606 S100A4P26447 101 aaKnown RBP6.04□□□□□ -1.44
GTF3A-206ENST00000470606 CMC4P56277 68 aaPredicted RBP6.04□□□□□ -1.44
GTF3A-206ENST00000470606 IQCJQ1A5X6 159 aa6.04□□□□□ -1.44
GTF3A-206ENST00000470606 COA6Q5JTJ3 125 aaKnown RBP6.04□□□□□ -1.44
GTF3A-206ENST00000470606 FAM104BQ5XKR9 115 aa6.04□□□□□ -1.44
GTF3A-206ENST00000470606 C11orf72Q8NBR9 251 aa6.04□□□□□ -1.44
GTF3A-206ENST00000470606 KCNS1Q96KK3 526 aa6.04□□□□□ -1.44
GTF3A-206ENST00000470606 RCHY1Q96PM5 261 aa6.04□□□□□ -1.44
GTF3A-206ENST00000470606 MCRIP2Q9BUT9 160 aaKnown RBP6.04□□□□□ -1.44
GTF3A-206ENST00000470606 INSP01308 110 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 MED14OSP0DP75 135 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 RAB4AP20338 218 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 HOXA5P20719 270 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 MRPL51Q4U2R6 128 aaKnown RBP6.03□□□□□ -1.44
GTF3A-206ENST00000470606 C18orf32Q8TCD1 76 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 TMEM191AQ9H0A3 160 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 KIF25-AS1Q9Y6Z4 181 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 A0A1B0GW15 77 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 CBY3A6NI87 242 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 SMKR1H3BMG3 65 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 UBE2CO00762 179 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 GATA1P15976 413 aaPredicted RBP6.03□□□□□ -1.44
GTF3A-206ENST00000470606 LINC00315P59091 139 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 PDZD11Q5EBL8 140 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 SPANXN1Q5VSR9 72 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 GTSCR1Q86UQ5 136 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 BORCS7Q96B45 105 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 URB1-AS1Q96HZ7 61 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 LINC01587Q99440 93 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 PHLDA3Q9Y5J5 127 aa6.03□□□□□ -1.44
GTF3A-206ENST00000470606 IGHV3OR16-12A0A075B7B8 117 aa6.02□□□□□ -1.45
GTF3A-206ENST00000470606 TRAV26-2A0A0B4J265 109 aa6.02□□□□□ -1.45
GTF3A-206ENST00000470606 PLAC8L1A1L4L8 177 aa6.02□□□□□ -1.45
GTF3A-206ENST00000470606 G3V4G9 280 aa6.02□□□□□ -1.45
GTF3A-206ENST00000470606 NCR2O95944 276 aa6.02□□□□□ -1.45
GTF3A-206ENST00000470606 S100A6P06703 90 aa6.02□□□□□ -1.45
GTF3A-206ENST00000470606 EGFEM1PQ0D2K5 195 aa6.02□□□□□ -1.45
GTF3A-206ENST00000470606 ZNF705AQ6ZN79 300 aaPredicted RBP6.02□□□□□ -1.45
GTF3A-206ENST00000470606 HIST3H2BBQ8N257 126 aa6.02□□□□□ -1.45
GTF3A-206ENST00000470606 LINC00467Q9BRT7 94 aa6.02□□□□□ -1.45
GTF3A-206ENST00000470606 SAMD10Q9BYL1 202 aa6.02□□□□□ -1.45
GTF3A-206ENST00000470606 GSN-AS1Q9NRJ2 163 aa6.02□□□□□ -1.45
GTF3A-206ENST00000470606 U3KQK5 164 aa6.02□□□□□ -1.45
GTF3A-206ENST00000470606 D6R8Y8 96 aa6.01□□□□□ -1.45
GTF3A-206ENST00000470606 SERF1AO75920 110 aa6.01□□□□□ -1.45
GTF3A-206ENST00000470606 NUTF2P61970 127 aaKnown RBP6.01□□□□□ -1.45
GTF3A-206ENST00000470606 CACNG7P62955 275 aa6.01□□□□□ -1.45
GTF3A-206ENST00000470606 Q0VG73 95 aa6.01□□□□□ -1.45
GTF3A-206ENST00000470606 C14orf178Q8N769 122 aaPredicted RBP6.01□□□□□ -1.45
GTF3A-206ENST00000470606 C20orf144Q9BQM9 153 aa6.01□□□□□ -1.45
GTF3A-206ENST00000470606 DNHD1Q96M86 4753 aa6.01□□□□□ -1.45
GTF3A-206ENST00000470606 S100A8P05109 93 aa6.01□□□□□ -1.45
GTF3A-206ENST00000470606 IL17DQ8TAD2 202 aa6.01□□□□□ -1.45
GTF3A-206ENST00000470606 RNASE8Q8TDE3 154 aaKnown RBP6.01□□□□□ -1.45
GTF3A-206ENST00000470606 TRGV11A0A075B6L2 103 aa6□□□□□ -1.45
GTF3A-206ENST00000470606 A0A087WWL8 130 aa6□□□□□ -1.45
GTF3A-206ENST00000470606 NPYP01303 97 aa6□□□□□ -1.45
GTF3A-206ENST00000470606 AMBPP02760 352 aa6□□□□□ -1.45
GTF3A-206ENST00000470606 CRYGDP07320 174 aa6□□□□□ -1.45
GTF3A-206ENST00000470606 CSTL1Q9H114 145 aa6□□□□□ -1.45
GTF3A-206ENST00000470606 COL7A1Q02388 2944 aa6□□□□□ -1.45
GTF3A-206ENST00000470606 IGHV4-30-4P0DP06 118 aa5.99□□□□□ -1.45
GTF3A-206ENST00000470606 ZNF876PQ49A33 203 aa5.99□□□□□ -1.45
GTF3A-206ENST00000470606 OR10J3Q5JRS4 329 aa5.99□□□□□ -1.45
GTF3A-206ENST00000470606 MORN3Q6PF18 240 aaPredicted RBP5.99□□□□□ -1.45
GTF3A-206ENST00000470606 NRACQ8N912 160 aa5.99□□□□□ -1.45
GTF3A-206ENST00000470606 TMEM208Q9BTX3 173 aa5.99□□□□□ -1.45
GTF3A-206ENST00000470606 SAMD5Q5TGI4 173 aa5.99□□□□□ -1.45
GTF3A-206ENST00000470606 POM121L12Q8N7R1 296 aa5.99□□□□□ -1.45
GTF3A-206ENST00000470606 HIST1H2BLQ99880 126 aa5.99□□□□□ -1.45
GTF3A-206ENST00000470606 ESDP10768 282 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms