RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 C18orf15Q96N68 181 aa7.47□□□□□ -1.21
SMC1A-206ENST00000470241 RPP21Q9H633 154 aaKnown RBP7.47□□□□□ -1.21
SMC1A-206ENST00000470241 STARD9Q9P2P6 4700 aa7.46□□□□□ -1.21
SMC1A-206ENST00000470241 GATCO43716 136 aaKnown RBP7.46□□□□□ -1.22
SMC1A-206ENST00000470241 IGLC6P0CF74 106 aa7.46□□□□□ -1.22
SMC1A-206ENST00000470241 MED14OSP0DP75 135 aa7.46□□□□□ -1.22
SMC1A-206ENST00000470241 ADCYAP1P18509 176 aa7.46□□□□□ -1.22
SMC1A-206ENST00000470241 RPS20P60866 119 aaKnown RBP7.46□□□□□ -1.22
SMC1A-206ENST00000470241 PTH2Q96A98 100 aa7.46□□□□□ -1.22
SMC1A-206ENST00000470241 SSBP4Q9BWG4 385 aaPredicted RBP7.46□□□□□ -1.22
SMC1A-206ENST00000470241 OSTCQ9NRP0 149 aa7.46□□□□□ -1.22
SMC1A-206ENST00000470241 PLECQ15149 4684 aaKnown RBP7.46□□□□□ -1.22
SMC1A-206ENST00000470241 TRGV2A0A075B6R0 118 aa7.45□□□□□ -1.22
SMC1A-206ENST00000470241 DEFB131BA0A096LNP1 70 aa7.45□□□□□ -1.22
SMC1A-206ENST00000470241 TRAV10A0A0B4J240 114 aa7.45□□□□□ -1.22
SMC1A-206ENST00000470241 C3orf84H3BNL1 204 aa7.45□□□□□ -1.22
SMC1A-206ENST00000470241 SNAI2O43623 268 aa7.45□□□□□ -1.22
SMC1A-206ENST00000470241 OR5AL1P0C617 328 aa7.45□□□□□ -1.22
SMC1A-206ENST00000470241 ZNF876PQ49A33 203 aa7.45□□□□□ -1.22
SMC1A-206ENST00000470241 DMRTA1Q5VZB9 504 aa7.45□□□□□ -1.22
SMC1A-206ENST00000470241 CEMP1Q6PRD7 247 aaPredicted RBP7.45□□□□□ -1.22
SMC1A-206ENST00000470241 POM121L12Q8N7R1 296 aa7.45□□□□□ -1.22
SMC1A-206ENST00000470241 XKRY2A2RUG3 117 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 NXPH4O95158 308 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 IGHV3-53P01767 116 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 ATP5G1P05496 136 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 HTN3P15516 51 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 HOXA5P20719 270 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 CT83Q5H943 113 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 PIK3CD-AS1Q5SR53 167 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 FER1L6-AS1Q8NA97 138 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 OR10AG1Q8NH19 301 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 GTSF1Q8WW33 167 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 SFRP2Q96HF1 295 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 NDUFAF3Q9BU61 184 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 PHLDA3Q9Y5J5 127 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 V9GYV3 84 aa7.44□□□□□ -1.22
SMC1A-206ENST00000470241 TRAV4A0A0B4J268 109 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 MUC21A0A0G2JKD1 596 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 MUC21A0A140T8X8 626 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 NUPR2A6NF83 97 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 F8W036 122 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 M0R381 172 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 RS1O15537 224 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 CASC10Q5T4H9 136 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 ZFP82Q8N141 532 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 C15orf54Q8N8G6 183 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 OR10G8Q8NGN5 311 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 ZNF479Q96JC4 524 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 TPPP3Q9BW30 176 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 SEC11CQ9BY50 192 aa7.43□□□□□ -1.22
SMC1A-206ENST00000470241 CSMD3Q7Z407 3707 aa7.42□□□□□ -1.22
SMC1A-206ENST00000470241 A0A1W2PPQ1 181 aa7.42□□□□□ -1.22
SMC1A-206ENST00000470241 A8MWL6 223 aa7.42□□□□□ -1.22
SMC1A-206ENST00000470241 F5H768 121 aa7.42□□□□□ -1.22
SMC1A-206ENST00000470241 CTRLP40313 264 aa7.42□□□□□ -1.22
SMC1A-206ENST00000470241 PNRC1Q12796 327 aaPredicted RBP7.42□□□□□ -1.22
SMC1A-206ENST00000470241 FHL2Q14192 279 aa7.42□□□□□ -1.22
SMC1A-206ENST00000470241 C10orf91Q5T1B1 145 aa7.42□□□□□ -1.22
SMC1A-206ENST00000470241 CFAP126Q5VTH2 177 aa7.42□□□□□ -1.22
SMC1A-206ENST00000470241 LYZL1Q6UWQ5 148 aa7.42□□□□□ -1.22
SMC1A-206ENST00000470241 SYT8Q8NBV8 401 aa7.42□□□□□ -1.22
SMC1A-206ENST00000470241 OR4C5Q8NGB2 326 aa7.42□□□□□ -1.22
SMC1A-206ENST00000470241 TSKUQ8WUA8 353 aa7.42□□□□□ -1.22
SMC1A-206ENST00000470241 JPT2Q9H910 190 aa7.42□□□□□ -1.22
SMC1A-206ENST00000470241 IGHV4-4A0A075B6R2 117 aa7.41□□□□□ -1.22
SMC1A-206ENST00000470241 A8MWV9 139 aa7.41□□□□□ -1.22
SMC1A-206ENST00000470241 F2Z2F3 143 aa7.41□□□□□ -1.22
SMC1A-206ENST00000470241 FOXA3P55318 350 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-206ENST00000470241 TMEM88Q6PEY1 159 aa7.41□□□□□ -1.22
SMC1A-206ENST00000470241 SAMD10Q9BYL1 202 aa7.41□□□□□ -1.22
SMC1A-206ENST00000470241 KLK5Q9Y337 293 aaPredicted RBP7.41□□□□□ -1.22
SMC1A-206ENST00000470241 MUC4Q99102 2169 aa7.4□□□□□ -1.22
SMC1A-206ENST00000470241 IGLL5B9A064 214 aa7.4□□□□□ -1.22
SMC1A-206ENST00000470241 SSTP61278 116 aa7.4□□□□□ -1.22
SMC1A-206ENST00000470241 CACNG7P62955 275 aa7.4□□□□□ -1.22
SMC1A-206ENST00000470241 RNF212Q495C1 297 aa7.4□□□□□ -1.22
SMC1A-206ENST00000470241 SPANXN1Q5VSR9 72 aa7.4□□□□□ -1.22
SMC1A-206ENST00000470241 UFSP1Q6NVU6 142 aa7.4□□□□□ -1.22
SMC1A-206ENST00000470241 WDR73Q6P4I2 378 aa7.4□□□□□ -1.22
SMC1A-206ENST00000470241 SLC7A5P1Q8MH63 180 aa7.4□□□□□ -1.22
SMC1A-206ENST00000470241 FAM210BQ96KR6 192 aa7.4□□□□□ -1.22
SMC1A-206ENST00000470241 CNFNQ9BYD5 112 aa7.4□□□□□ -1.22
SMC1A-206ENST00000470241 GFRA4Q9GZZ7 299 aa7.4□□□□□ -1.22
SMC1A-206ENST00000470241 MSRB1Q9NZV6 116 aa7.4□□□□□ -1.22
SMC1A-206ENST00000470241 CARHSP1Q9Y2V2 147 aaKnown RBP7.4□□□□□ -1.22
SMC1A-206ENST00000470241 TRAV26-1A0A087WT03 109 aa7.39□□□□□ -1.23
SMC1A-206ENST00000470241 IGHV3-73A0A0B4J1V6 119 aa7.39□□□□□ -1.23
SMC1A-206ENST00000470241 TRGV4A0A0C4DH28 118 aa7.39□□□□□ -1.23
SMC1A-206ENST00000470241 FAM231BA6NCW3 169 aa7.39□□□□□ -1.23
SMC1A-206ENST00000470241 HIGD1CA8MV81 97 aa7.39□□□□□ -1.23
SMC1A-206ENST00000470241 CRYGDP07320 174 aa7.39□□□□□ -1.23
SMC1A-206ENST00000470241 VSIG2Q96IQ7 327 aa7.39□□□□□ -1.23
SMC1A-206ENST00000470241 PGLYRP4Q96LB8 373 aa7.39□□□□□ -1.23
SMC1A-206ENST00000470241 APLNQ9ULZ1 77 aa7.39□□□□□ -1.23
SMC1A-206ENST00000470241 A0A087WWL8 130 aa7.38□□□□□ -1.23
SMC1A-206ENST00000470241 A0A0J9YY99 117 aa7.38□□□□□ -1.23
SMC1A-206ENST00000470241 SMIM27A0A1W2PRY6 76 aa7.38□□□□□ -1.23
SMC1A-206ENST00000470241 PPP1R2P9O14990 202 aa7.38□□□□□ -1.23
SMC1A-206ENST00000470241 CIDEAO60543 219 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms