RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 LAMA3Q16787 3333 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 IGHV1OR21-1A0A087WYE8 117 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 E7EUB6 86 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 H7C423 109 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 SMIM22K7EJ46 135 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 WNT9BO14905 357 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 SPINK4O60575 86 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 IGHV3-33P01772 117 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 PIRTP0C851 137 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 Q0VFX4 171 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 GTF3C1Q12789 2109 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 CIRBPQ14011 172 aaKnown RBP3.75□□□□□ -1.81
COL3A1-205ENST00000470167 PLGLAQ15195 96 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 CRIP3Q6Q6R5 217 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 ZNF818PQ6ZRF7 136 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 C20orf197Q8N268 126 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 MAPKAPK5-AS1Q8N8E1 139 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 LHFPL6Q9Y693 200 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 PTPRSQ13332 1948 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 RALGAPA1Q6GYQ0 2036 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 COL4A6Q14031 1691 aa3.75□□□□□ -1.81
COL3A1-205ENST00000470167 A0A087X002 238 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 IGHV6-1A0A0B4J1U7 121 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 A0A0J9YXV3 536 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 TRBV10-3A0A0K0K1G6 114 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 TMEM30CPA0ZSE6 113 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 LOC730098B7Z3J9 87 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 K7EMI3 77 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 CISD3P0C7P0 127 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 CFC1BP0CG36 223 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 CFC1P0CG37 223 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 KRTAP10-2P60368 255 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 HOXA4Q00056 320 aaPredicted RBP3.74□□□□□ -1.81
COL3A1-205ENST00000470167 C6orf99Q4VX62 202 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 GGNQ86UU5 652 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 WFDC6Q9BQY6 131 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 TIMM21Q9BVV7 248 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 NPCDR1Q9BY65 106 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 SPRR3Q9UBC9 169 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 TAC3Q9UHF0 121 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 U3KQK5 164 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 KIAA2026Q5HYC2 2103 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 TRIP12Q14669 1992 aaPredicted RBP3.74□□□□□ -1.81
COL3A1-205ENST00000470167 GREB1Q4ZG55 1949 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 ANAPC1Q9H1A4 1944 aa3.74□□□□□ -1.81
COL3A1-205ENST00000470167 FBN3Q75N90 2809 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 PLXNB2O15031 1838 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 KIAA0100Q14667 2235 aaKnown RBP3.73□□□□□ -1.81
COL3A1-205ENST00000470167 USP24Q9UPU5 2620 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 TMEM223A0PJW6 202 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 HMGA1P17096 107 aaKnown RBP3.73□□□□□ -1.81
COL3A1-205ENST00000470167 PLNP26678 52 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 FCER1GP30273 86 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 LMO4P61968 165 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 ASB16-AS1Q495Z4 193 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 FOXL2NBQ6ZUU3 175 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 MPLKIPQ8TAP9 179 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 DYNLRB2Q8TF09 96 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 CYYR1Q96J86 154 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 TTTY13Q9BZ97 58 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 BPESC1Q9GZL8 116 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 TMEM14AQ9Y6G1 99 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 HECTD1Q9ULT8 2610 aa3.73□□□□□ -1.81
COL3A1-205ENST00000470167 LTBP2Q14767 1821 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 PLXNB3Q9ULL4 1909 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 CPSF4LA6NMK7 179 aaKnown RBP3.72□□□□□ -1.81
COL3A1-205ENST00000470167 HIGD1CA8MV81 97 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 ERC2-IT1O76042 136 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 IGHV4-31P0DP07 118 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 CD28P10747 220 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 MIFP14174 115 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 S100A4P26447 101 aaKnown RBP3.72□□□□□ -1.81
COL3A1-205ENST00000470167 NOVP48745 357 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 FXYD3Q14802 87 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 FAM229BQ4G0N7 80 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 LINC01590Q5TEZ4 76 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 PATE2Q6UY27 113 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 C18orf65Q6ZTR6 163 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 DYNAPQ8N1N2 210 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 PRSS3P2Q8NHM4 247 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 CCL4L1Q8NHW4 92 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 ITLN1Q8WWA0 313 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 ITLN2Q8WWU7 325 aaPredicted RBP3.72□□□□□ -1.81
COL3A1-205ENST00000470167 KLK15Q9H2R5 256 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 SMAD5-AS1Q9Y6J3 95 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 DNAH12Q6ZR08 3092 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 SSC5DA1L4H1 1573 aa3.72□□□□□ -1.81
COL3A1-205ENST00000470167 MGAMO43451 1857 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 ARHGAP21Q5T5U3 1957 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 TRGV8A0A0C4DH27 118 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 C12orf77C9JDV5 145 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 F8WEM9 126 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 C19orf84I3L1E1 186 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 HMGN4O00479 90 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 GNRH2O43555 120 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 PRM2P04554 102 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 FGF12P61328 243 aa3.71□□□□□ -1.82
COL3A1-205ENST00000470167 RPS18P62269 152 aaKnown RBP3.71□□□□□ -1.82
COL3A1-205ENST00000470167 SYCNQ0VAF6 134 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms