RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 LINC00479Q96M42 142 aa11.24□□□□□ -0.61
GTF3C2-209ENST00000470115 TCEAL7Q9BRU2 100 aa11.24□□□□□ -0.61
GTF3C2-209ENST00000470115 SCO2A0A1W2PP80 73 aa11.23□□□□□ -0.61
GTF3C2-209ENST00000470115 FBLL1A6NHQ2 334 aaKnown RBP11.23□□□□□ -0.61
GTF3C2-209ENST00000470115 BCL2P10415 239 aa11.23□□□□□ -0.61
GTF3C2-209ENST00000470115 GYPEP15421 78 aa11.23□□□□□ -0.61
GTF3C2-209ENST00000470115 NEGR1Q7Z3B1 354 aa11.23□□□□□ -0.61
GTF3C2-209ENST00000470115 RYR1P21817 5038 aa11.23□□□□□ -0.61
GTF3C2-209ENST00000470115 K7EQD1 137 aa11.22□□□□□ -0.61
GTF3C2-209ENST00000470115 MEF2BQ02080 365 aaPredicted RBP11.22□□□□□ -0.61
GTF3C2-209ENST00000470115 SMUG1Q53HV7 270 aa11.22□□□□□ -0.61
GTF3C2-209ENST00000470115 FMC1Q96HJ9 113 aa11.22□□□□□ -0.61
GTF3C2-209ENST00000470115 TXNDC17Q9BRA2 123 aa11.22□□□□□ -0.61
GTF3C2-209ENST00000470115 KRTAP17-1Q9BYP8 105 aa11.22□□□□□ -0.61
GTF3C2-209ENST00000470115 VAX2Q9UIW0 290 aa11.22□□□□□ -0.61
GTF3C2-209ENST00000470115 C9JCJ5 164 aa11.21□□□□□ -0.61
GTF3C2-209ENST00000470115 ORM1P02763 201 aa11.21□□□□□ -0.61
GTF3C2-209ENST00000470115 PFN1P07737 140 aaKnown RBP11.21□□□□□ -0.61
GTF3C2-209ENST00000470115 SRIP30626 198 aa11.21□□□□□ -0.61
GTF3C2-209ENST00000470115 TAGLN2P37802 199 aaKnown RBP11.21□□□□□ -0.61
GTF3C2-209ENST00000470115 SAPCD1Q5SSQ6 148 aa11.21□□□□□ -0.61
GTF3C2-209ENST00000470115 Q86TA4 180 aa11.21□□□□□ -0.61
GTF3C2-209ENST00000470115 LRP1BQ9NZR2 4599 aa11.2□□□□□ -0.62
GTF3C2-209ENST00000470115 RAB14P61106 215 aa11.2□□□□□ -0.62
GTF3C2-209ENST00000470115 ZNF876PQ49A33 203 aa11.2□□□□□ -0.62
GTF3C2-209ENST00000470115 EIF5A2Q9GZV4 153 aaKnown RBP11.2□□□□□ -0.62
GTF3C2-209ENST00000470115 PCLOQ9Y6V0 5065 aa11.19□□□□□ -0.62
GTF3C2-209ENST00000470115 LOC100131303A0A0U1RQF7 123 aa11.19□□□□□ -0.62
GTF3C2-209ENST00000470115 RBFOX3A6NFN3 312 aa11.19□□□□□ -0.62
GTF3C2-209ENST00000470115 C16orf90A8MZG2 172 aa11.19□□□□□ -0.62
GTF3C2-209ENST00000470115 PDE6DO43924 150 aa11.19□□□□□ -0.62
GTF3C2-209ENST00000470115 GATA1P15976 413 aaPredicted RBP11.19□□□□□ -0.62
GTF3C2-209ENST00000470115 BTF3P20290 206 aaKnown RBP11.19□□□□□ -0.62
GTF3C2-209ENST00000470115 LINC00315P59091 139 aa11.19□□□□□ -0.62
GTF3C2-209ENST00000470115 TOR2AQ5JU69 321 aa11.19□□□□□ -0.62
GTF3C2-209ENST00000470115 LYPD6BQ8NI32 183 aa11.19□□□□□ -0.62
GTF3C2-209ENST00000470115 MED9Q9NWA0 146 aa11.19□□□□□ -0.62
GTF3C2-209ENST00000470115 S100A9P06702 114 aaKnown RBP11.18□□□□□ -0.62
GTF3C2-209ENST00000470115 CEBPGP53567 150 aa11.18□□□□□ -0.62
GTF3C2-209ENST00000470115 C9orf85Q96MD7 179 aa11.18□□□□□ -0.62
GTF3C2-209ENST00000470115 PGPEP1LA6NFU8 196 aa11.17□□□□□ -0.62
GTF3C2-209ENST00000470115 RS1O15537 224 aa11.17□□□□□ -0.62
GTF3C2-209ENST00000470115 CFAP126Q5VTH2 177 aa11.17□□□□□ -0.62
GTF3C2-209ENST00000470115 SPATA12Q7Z6I5 190 aa11.17□□□□□ -0.62
GTF3C2-209ENST00000470115 NHLRC2Q8NBF2 726 aa11.17□□□□□ -0.62
GTF3C2-209ENST00000470115 ZFP30Q9Y2G7 519 aa11.17□□□□□ -0.62
GTF3C2-209ENST00000470115 TNFRSF18Q9Y5U5 241 aa11.17□□□□□ -0.62
GTF3C2-209ENST00000470115 FABP5P3A8MUU1 101 aa11.16□□□□□ -0.62
GTF3C2-209ENST00000470115 RNASE3P12724 160 aaKnown RBP11.16□□□□□ -0.62
GTF3C2-209ENST00000470115 RPL35P42766 123 aaKnown RBP11.16□□□□□ -0.62
GTF3C2-209ENST00000470115 ZNF506Q5JVG8 444 aa11.16□□□□□ -0.62
GTF3C2-209ENST00000470115 Q6ZRN7 208 aaPredicted RBP11.16□□□□□ -0.62
GTF3C2-209ENST00000470115 WFDC10BQ8IUB3 73 aa11.16□□□□□ -0.62
GTF3C2-209ENST00000470115 C11orf52Q96A22 123 aa11.16□□□□□ -0.62
GTF3C2-209ENST00000470115 FAM210AQ96ND0 272 aa11.16□□□□□ -0.62
GTF3C2-209ENST00000470115 DERL1Q9BUN8 251 aa11.16□□□□□ -0.62
GTF3C2-209ENST00000470115 HSPG2P98160 4391 aa11.15□□□□□ -0.62
GTF3C2-209ENST00000470115 IGHV3-73A0A0B4J1V6 119 aa11.15□□□□□ -0.62
GTF3C2-209ENST00000470115 IGKV3D-20A0A0C4DH25 116 aa11.15□□□□□ -0.62
GTF3C2-209ENST00000470115 LTAP01374 205 aa11.15□□□□□ -0.62
GTF3C2-209ENST00000470115 ZNF674Q2M3X9 581 aa11.15□□□□□ -0.62
GTF3C2-209ENST00000470115 BAGE2Q86Y30 109 aa11.15□□□□□ -0.62
GTF3C2-209ENST00000470115 SLC25A29Q8N8R3 303 aa11.15□□□□□ -0.62
GTF3C2-209ENST00000470115 PTH2Q96A98 100 aa11.15□□□□□ -0.62
GTF3C2-209ENST00000470115 LY96Q9Y6Y9 160 aa11.15□□□□□ -0.62
GTF3C2-209ENST00000470115 DNAH5Q8TE73 4624 aa11.14□□□□□ -0.63
GTF3C2-209ENST00000470115 TRAV9-2A0A087WT02 112 aa11.14□□□□□ -0.63
GTF3C2-209ENST00000470115 TRBV6-1A0A0K0K1D8 114 aa11.14□□□□□ -0.63
GTF3C2-209ENST00000470115 KRTAP10-2P60368 255 aa11.14□□□□□ -0.63
GTF3C2-209ENST00000470115 SH2D6Q7Z4S9 175 aa11.14□□□□□ -0.63
GTF3C2-209ENST00000470115 ZC2HC1AQ96GY0 325 aa11.14□□□□□ -0.63
GTF3C2-209ENST00000470115 RAB19A4D1S5 217 aa11.13□□□□□ -0.63
GTF3C2-209ENST00000470115 CIDEAO60543 219 aa11.13□□□□□ -0.63
GTF3C2-209ENST00000470115 S100A4P26447 101 aaKnown RBP11.13□□□□□ -0.63
GTF3C2-209ENST00000470115 GNG4P50150 75 aa11.13□□□□□ -0.63
GTF3C2-209ENST00000470115 CRIP1P50238 77 aa11.13□□□□□ -0.63
GTF3C2-209ENST00000470115 CENPWQ5EE01 88 aa11.13□□□□□ -0.63
GTF3C2-209ENST00000470115 PRR27Q6MZM9 219 aa11.13□□□□□ -0.63
GTF3C2-209ENST00000470115 TRBV6-4A0A1B0GX49 114 aa11.12□□□□□ -0.63
GTF3C2-209ENST00000470115 B4DEV8 164 aa11.12□□□□□ -0.63
GTF3C2-209ENST00000470115 MGST1P10620 155 aaKnown RBP11.12□□□□□ -0.63
GTF3C2-209ENST00000470115 EVI2AP22794 236 aa11.12□□□□□ -0.63
GTF3C2-209ENST00000470115 ASIPP42127 132 aa11.12□□□□□ -0.63
GTF3C2-209ENST00000470115 IFITM2Q01629 132 aa11.12□□□□□ -0.63
GTF3C2-209ENST00000470115 FAM162BQ5T6X4 162 aa11.12□□□□□ -0.63
GTF3C2-209ENST00000470115 PRADC1Q9BSG0 188 aa11.12□□□□□ -0.63
GTF3C2-209ENST00000470115 TMEM250H0YL14 139 aa11.11□□□□□ -0.63
GTF3C2-209ENST00000470115 DNAH10OSP0CZ25 163 aa11.11□□□□□ -0.63
GTF3C2-209ENST00000470115 TIRAPP58753 221 aa11.11□□□□□ -0.63
GTF3C2-209ENST00000470115 RHOHQ15669 191 aa11.11□□□□□ -0.63
GTF3C2-209ENST00000470115 COX8CQ7Z4L0 72 aa11.11□□□□□ -0.63
GTF3C2-209ENST00000470115 APOBP04114 4563 aaKnown RBP11.11□□□□□ -0.63
GTF3C2-209ENST00000470115 KRBOX1C9JBD0 128 aa11.1□□□□□ -0.63
GTF3C2-209ENST00000470115 M0R036 132 aa11.1□□□□□ -0.63
GTF3C2-209ENST00000470115 SH2D1AO60880 128 aa11.1□□□□□ -0.63
GTF3C2-209ENST00000470115 PEA15Q15121 130 aa11.1□□□□□ -0.63
GTF3C2-209ENST00000470115 Q6ZSN1 163 aa11.1□□□□□ -0.63
GTF3C2-209ENST00000470115 NFE4Q86UQ8 179 aa11.1□□□□□ -0.63
GTF3C2-209ENST00000470115 PARLQ9H300 379 aa11.1□□□□□ -0.63
GTF3C2-209ENST00000470115 JPT2Q9H910 190 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms