RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 MBPP02686 304 aaPredicted RBP7.52□□□□□ -1.21
LSM2-209ENST00000470083 AP3S2P59780 193 aa7.52□□□□□ -1.21
LSM2-209ENST00000470083 RANP62826 216 aaKnown RBP7.52□□□□□ -1.21
LSM2-209ENST00000470083 SPINK6Q6UWN8 80 aa7.52□□□□□ -1.21
LSM2-209ENST00000470083 GSKIPQ9P0R6 139 aa7.52□□□□□ -1.21
LSM2-209ENST00000470083 IGHV3-64A0A075B6Q5 118 aa7.51□□□□□ -1.21
LSM2-209ENST00000470083 L7N2F9 121 aa7.51□□□□□ -1.21
LSM2-209ENST00000470083 VAMP2P63027 116 aa7.51□□□□□ -1.21
LSM2-209ENST00000470083 C14orf178Q8N769 122 aaPredicted RBP7.51□□□□□ -1.21
LSM2-209ENST00000470083 C15orf54Q8N8G6 183 aa7.51□□□□□ -1.21
LSM2-209ENST00000470083 CLRN3Q8NCR9 226 aa7.51□□□□□ -1.21
LSM2-209ENST00000470083 TRIM63Q969Q1 353 aa7.51□□□□□ -1.21
LSM2-209ENST00000470083 TREM1Q9NP99 234 aa7.51□□□□□ -1.21
LSM2-209ENST00000470083 A8MWV9 139 aa7.5□□□□□ -1.21
LSM2-209ENST00000470083 SMIM18P0DKX4 95 aa7.5□□□□□ -1.21
LSM2-209ENST00000470083 FGF7P21781 194 aa7.5□□□□□ -1.21
LSM2-209ENST00000470083 BCAP31P51572 246 aa7.5□□□□□ -1.21
LSM2-209ENST00000470083 MIAQ16674 131 aa7.5□□□□□ -1.21
LSM2-209ENST00000470083 UFSP1Q6NVU6 142 aa7.5□□□□□ -1.21
LSM2-209ENST00000470083 TOMM5Q8N4H5 51 aa7.5□□□□□ -1.21
LSM2-209ENST00000470083 OR10G7Q8NGN6 311 aa7.5□□□□□ -1.21
LSM2-209ENST00000470083 TVP23CQ96ET8 276 aa7.5□□□□□ -1.21
LSM2-209ENST00000470083 TMEM262E9PQX1 116 aa7.49□□□□□ -1.21
LSM2-209ENST00000470083 ATP6V1G2O95670 118 aa7.49□□□□□ -1.21
LSM2-209ENST00000470083 RNASE3P12724 160 aaKnown RBP7.49□□□□□ -1.21
LSM2-209ENST00000470083 S100A11P31949 105 aa7.49□□□□□ -1.21
LSM2-209ENST00000470083 PIK3CD-AS1Q5SR53 167 aa7.49□□□□□ -1.21
LSM2-209ENST00000470083 OR2G3Q8NGZ4 309 aa7.49□□□□□ -1.21
LSM2-209ENST00000470083 GTSF1Q8WW33 167 aa7.49□□□□□ -1.21
LSM2-209ENST00000470083 DEDD2Q8WXF8 326 aa7.49□□□□□ -1.21
LSM2-209ENST00000470083 NPCDR1Q9BY65 106 aa7.49□□□□□ -1.21
LSM2-209ENST00000470083 C11orf21Q9P2W6 132 aa7.49□□□□□ -1.21
LSM2-209ENST00000470083 hCG_2014768A0A024R1R8 64 aa7.48□□□□□ -1.21
LSM2-209ENST00000470083 TAAR5O14804 337 aa7.48□□□□□ -1.21
LSM2-209ENST00000470083 OR7C2O60412 319 aa7.48□□□□□ -1.21
LSM2-209ENST00000470083 ANGP03950 147 aaKnown RBP7.48□□□□□ -1.21
LSM2-209ENST00000470083 MPV17L2Q567V2 206 aa7.48□□□□□ -1.21
LSM2-209ENST00000470083 SPANXN2Q5MJ10 180 aa7.48□□□□□ -1.21
LSM2-209ENST00000470083 KRTAP26-1Q6PEX3 210 aa7.48□□□□□ -1.21
LSM2-209ENST00000470083 HYLS1Q96M11 299 aa7.48□□□□□ -1.21
LSM2-209ENST00000470083 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.47□□□□□ -1.21
LSM2-209ENST00000470083 FAM24AA6NFZ4 105 aa7.47□□□□□ -1.21
LSM2-209ENST00000470083 SULT1A1P50225 295 aa7.47□□□□□ -1.21
LSM2-209ENST00000470083 UBE2L3P68036 154 aaKnown RBP7.47□□□□□ -1.21
LSM2-209ENST00000470083 HBG1P69891 147 aa7.47□□□□□ -1.21
LSM2-209ENST00000470083 HBG2P69892 147 aa7.47□□□□□ -1.21
LSM2-209ENST00000470083 GOLT1AQ6ZVE7 132 aa7.47□□□□□ -1.21
LSM2-209ENST00000470083 NMES1Q9C002 83 aa7.47□□□□□ -1.21
LSM2-209ENST00000470083 C11orf1Q9H5F2 150 aa7.47□□□□□ -1.21
LSM2-209ENST00000470083 VAX2Q9UIW0 290 aa7.47□□□□□ -1.21
LSM2-209ENST00000470083 hDV102S1A0JD36 115 aa7.46□□□□□ -1.22
LSM2-209ENST00000470083 RHODO00212 210 aa7.46□□□□□ -1.22
LSM2-209ENST00000470083 SRSF9Q13242 221 aaKnown RBP eCLIP7.46□□□□□ -1.22
LSM2-209ENST00000470083 SPCS2Q15005 226 aa7.46□□□□□ -1.22
LSM2-209ENST00000470083 LGALSLQ3ZCW2 172 aaPredicted RBP7.46□□□□□ -1.22
LSM2-209ENST00000470083 CMTM2Q8TAZ6 248 aa7.46□□□□□ -1.22
LSM2-209ENST00000470083 BCL7BQ9BQE9 202 aa7.46□□□□□ -1.22
LSM2-209ENST00000470083 SLIRPQ9GZT3 109 aaKnown RBP7.46□□□□□ -1.22
LSM2-209ENST00000470083 OTORQ9NRC9 128 aa7.46□□□□□ -1.22
LSM2-209ENST00000470083 PRR34Q9NV39 138 aa7.46□□□□□ -1.22
LSM2-209ENST00000470083 LSM5Q9Y4Y9 91 aaKnown RBP7.46□□□□□ -1.22
LSM2-209ENST00000470083 SLPIP03973 132 aa7.45□□□□□ -1.22
LSM2-209ENST00000470083 TCRBP04435 133 aa7.45□□□□□ -1.22
LSM2-209ENST00000470083 ZNF80P51504 273 aaPredicted RBP7.45□□□□□ -1.22
LSM2-209ENST00000470083 ATP6V1FQ16864 119 aa7.45□□□□□ -1.22
LSM2-209ENST00000470083 STX12Q86Y82 276 aa7.45□□□□□ -1.22
LSM2-209ENST00000470083 ARL6IP6Q8N6S5 226 aa7.45□□□□□ -1.22
LSM2-209ENST00000470083 TMEM75Q8N9X5 138 aa7.45□□□□□ -1.22
LSM2-209ENST00000470083 JPT2Q9H910 190 aa7.45□□□□□ -1.22
LSM2-209ENST00000470083 LYRM2Q9NU23 88 aaPredicted RBP7.45□□□□□ -1.22
LSM2-209ENST00000470083 AP5S1Q9NUS5 200 aa7.45□□□□□ -1.22
LSM2-209ENST00000470083 FSIP2Q5CZC0 6907 aa7.45□□□□□ -1.22
LSM2-209ENST00000470083 TRBV6-8A0A0A6YYG3 113 aa7.44□□□□□ -1.22
LSM2-209ENST00000470083 IGSF23A1L1A6 192 aa7.44□□□□□ -1.22
LSM2-209ENST00000470083 UBE2D3P61077 147 aa7.44□□□□□ -1.22
LSM2-209ENST00000470083 PKIAP61925 76 aa7.44□□□□□ -1.22
LSM2-209ENST00000470083 UBE2D2P62837 147 aa7.44□□□□□ -1.22
LSM2-209ENST00000470083 TMEM252Q8N6L7 170 aa7.44□□□□□ -1.22
LSM2-209ENST00000470083 NDFIP1Q9BT67 221 aa7.44□□□□□ -1.22
LSM2-209ENST00000470083 A0A087WWL8 130 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 TRBV10-1A0A0K0K1A3 114 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 FAM231BA6NCW3 169 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 H7C1H1 209 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 NDUFB6O95139 128 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 PVALBP20472 110 aaPredicted RBP7.43□□□□□ -1.22
LSM2-209ENST00000470083 S100A10P60903 97 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 RPL36AP83881 106 aaKnown RBP7.43□□□□□ -1.22
LSM2-209ENST00000470083 MAJINQ3KP22 176 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 PYDC2Q56P42 97 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 FAM74A1Q5RGS3 127 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 THAP6Q8TBB0 222 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 MITD1Q8WV92 249 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 RPL36ALQ969Q0 106 aaKnown RBP7.43□□□□□ -1.22
LSM2-209ENST00000470083 KCNIP2Q9NS61 270 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 OR5AC2Q9NZP5 309 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 FLVCR2Q9UPI3 526 aa7.43□□□□□ -1.22
LSM2-209ENST00000470083 TRBV7-3A0A075B6L6 115 aa7.42□□□□□ -1.22
LSM2-209ENST00000470083 MUC21A0A0G2JKD1 596 aa7.42□□□□□ -1.22
LSM2-209ENST00000470083 GCGP01275 180 aa7.42□□□□□ -1.22
LSM2-209ENST00000470083 S100A4P26447 101 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms