RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 KHDC3LQ587J8 217 aa12.22□□□□□ -0.45
NCKIPSD-209ENST00000470006 SGK494Q96LW2 274 aa12.22□□□□□ -0.45
NCKIPSD-209ENST00000470006 C9orf85Q96MD7 179 aa12.22□□□□□ -0.45
NCKIPSD-209ENST00000470006 NDFIP1Q9BT67 221 aa12.22□□□□□ -0.45
NCKIPSD-209ENST00000470006 TNXBP22105 4242 aa12.21□□□□□ -0.45
NCKIPSD-209ENST00000470006 C17orf112F2Z3M2 114 aa12.21□□□□□ -0.45
NCKIPSD-209ENST00000470006 TAAR5O14804 337 aa12.21□□□□□ -0.45
NCKIPSD-209ENST00000470006 LINC00694P0DN24 101 aa12.21□□□□□ -0.45
NCKIPSD-209ENST00000470006 BTCP35070 178 aa12.21□□□□□ -0.45
NCKIPSD-209ENST00000470006 Q0VG73 95 aa12.21□□□□□ -0.45
NCKIPSD-209ENST00000470006 CNPY1Q3B7I2 92 aa12.21□□□□□ -0.45
NCKIPSD-209ENST00000470006 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
NCKIPSD-209ENST00000470006 OR10G9Q8NGN4 311 aa12.21□□□□□ -0.45
NCKIPSD-209ENST00000470006 PARLQ9H300 379 aa12.21□□□□□ -0.45
NCKIPSD-209ENST00000470006 MBD2Q9UBB5 411 aa12.21□□□□□ -0.45
NCKIPSD-209ENST00000470006 Q9UF83 564 aa12.21□□□□□ -0.45
NCKIPSD-209ENST00000470006 TAS2R45P59539 299 aa12.2□□□□□ -0.46
NCKIPSD-209ENST00000470006 ZFP2Q6ZN57 461 aa12.2□□□□□ -0.46
NCKIPSD-209ENST00000470006 HSD17B11Q8NBQ5 300 aa12.2□□□□□ -0.46
NCKIPSD-209ENST00000470006 ZC2HC1AQ96GY0 325 aa12.2□□□□□ -0.46
NCKIPSD-209ENST00000470006 SEC22CQ9BRL7 303 aa12.2□□□□□ -0.46
NCKIPSD-209ENST00000470006 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
NCKIPSD-209ENST00000470006 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.2□□□□□ -0.46
NCKIPSD-209ENST00000470006 A8MWV9 139 aa12.19□□□□□ -0.46
NCKIPSD-209ENST00000470006 EIF3GO75821 320 aaKnown RBP eCLIP12.19□□□□□ -0.46
NCKIPSD-209ENST00000470006 HLA-DQA1P01909 254 aa12.19□□□□□ -0.46
NCKIPSD-209ENST00000470006 C14orf178Q8N769 122 aaPredicted RBP12.19□□□□□ -0.46
NCKIPSD-209ENST00000470006 TMEM75Q8N9X5 138 aa12.19□□□□□ -0.46
NCKIPSD-209ENST00000470006 PTH2Q96A98 100 aa12.19□□□□□ -0.46
NCKIPSD-209ENST00000470006 DPH3Q96FX2 82 aa12.19□□□□□ -0.46
NCKIPSD-209ENST00000470006 USP17L23D6RBM5 183 aa12.18□□□□□ -0.46
NCKIPSD-209ENST00000470006 TMEM262E9PQX1 116 aa12.18□□□□□ -0.46
NCKIPSD-209ENST00000470006 CRPP02741 224 aa12.18□□□□□ -0.46
NCKIPSD-209ENST00000470006 ZNF80P51504 273 aaPredicted RBP12.18□□□□□ -0.46
NCKIPSD-209ENST00000470006 GNG5P63218 68 aa12.18□□□□□ -0.46
NCKIPSD-209ENST00000470006 ATRAIDQ6UW56 229 aa12.18□□□□□ -0.46
NCKIPSD-209ENST00000470006 WDR61Q9GZS3 305 aaKnown RBP12.18□□□□□ -0.46
NCKIPSD-209ENST00000470006 TRAV6A0A075B6T7 132 aa12.17□□□□□ -0.46
NCKIPSD-209ENST00000470006 CCDC160A6NGH7 325 aa12.17□□□□□ -0.46
NCKIPSD-209ENST00000470006 GCGP01275 180 aa12.17□□□□□ -0.46
NCKIPSD-209ENST00000470006 RNASE3P12724 160 aaKnown RBP12.17□□□□□ -0.46
NCKIPSD-209ENST00000470006 S100A4P26447 101 aaKnown RBP12.17□□□□□ -0.46
NCKIPSD-209ENST00000470006 OR2G3Q8NGZ4 309 aa12.17□□□□□ -0.46
NCKIPSD-209ENST00000470006 CHCHD7Q9BUK0 85 aa12.17□□□□□ -0.46
NCKIPSD-209ENST00000470006 DGAT2L7PQ6IED9 249 aa12.16□□□□□ -0.46
NCKIPSD-209ENST00000470006 PANO1I0J062 215 aa12.15□□□□□ -0.46
NCKIPSD-209ENST00000470006 PRSS1P07477 247 aa12.15□□□□□ -0.46
NCKIPSD-209ENST00000470006 ZFP69Q49AA0 526 aa12.15□□□□□ -0.46
NCKIPSD-209ENST00000470006 C15orf54Q8N8G6 183 aa12.15□□□□□ -0.46
NCKIPSD-209ENST00000470006 C9orf163Q8N9P6 203 aa12.15□□□□□ -0.46
NCKIPSD-209ENST00000470006 LINC00479Q96M42 142 aa12.15□□□□□ -0.46
NCKIPSD-209ENST00000470006 JPT2Q9H910 190 aa12.15□□□□□ -0.46
NCKIPSD-209ENST00000470006 IL15RAQ13261 267 aa12.14□□□□□ -0.47
NCKIPSD-209ENST00000470006 ARL6IP6Q8N6S5 226 aa12.14□□□□□ -0.47
NCKIPSD-209ENST00000470006 SMUG1Q53HV7 270 aa12.13□□□□□ -0.47
NCKIPSD-209ENST00000470006 FAM74A4Q5TZK3 123 aa12.13□□□□□ -0.47
NCKIPSD-209ENST00000470006 ENHOQ6UWT2 76 aa12.13□□□□□ -0.47
NCKIPSD-209ENST00000470006 OR5AC2Q9NZP5 309 aa12.13□□□□□ -0.47
NCKIPSD-209ENST00000470006 ODF1Q14990 250 aa12.12□□□□□ -0.47
NCKIPSD-209ENST00000470006 K7EQM0 130 aa12.11□□□□□ -0.47
NCKIPSD-209ENST00000470006 ANGP03950 147 aaKnown RBP12.11□□□□□ -0.47
NCKIPSD-209ENST00000470006 TCRBP04435 133 aa12.11□□□□□ -0.47
NCKIPSD-209ENST00000470006 SCGB1C1Q8TD33 95 aa12.11□□□□□ -0.47
NCKIPSD-209ENST00000470006 NUDT15Q9NV35 164 aa12.11□□□□□ -0.47
NCKIPSD-209ENST00000470006 PSG8Q9UQ74 426 aa12.11□□□□□ -0.47
NCKIPSD-209ENST00000470006 A0A1W2PPV4 95 aa12.1□□□□□ -0.47
NCKIPSD-209ENST00000470006 RHODO00212 210 aa12.1□□□□□ -0.47
NCKIPSD-209ENST00000470006 GAS8-AS1O95177 125 aa12.1□□□□□ -0.47
NCKIPSD-209ENST00000470006 IL7P13232 177 aa12.1□□□□□ -0.47
NCKIPSD-209ENST00000470006 RPL19P84098 196 aaKnown RBP12.1□□□□□ -0.47
NCKIPSD-209ENST00000470006 LRRC37A5PQ49AS3 106 aa12.1□□□□□ -0.47
NCKIPSD-209ENST00000470006 PQLC2Q6ZP29 291 aa12.1□□□□□ -0.47
NCKIPSD-209ENST00000470006 SDIM1Q6ZPB5 146 aa12.1□□□□□ -0.47
NCKIPSD-209ENST00000470006 PRNTQ86SH4 94 aa12.1□□□□□ -0.47
NCKIPSD-209ENST00000470006 OR10G7Q8NGN6 311 aa12.1□□□□□ -0.47
NCKIPSD-209ENST00000470006 SDHCQ99643 169 aaPredicted RBP12.1□□□□□ -0.47
NCKIPSD-209ENST00000470006 SERTM2A0A1B0GWG4 89 aa12.09□□□□□ -0.47
NCKIPSD-209ENST00000470006 PIK3CD-AS1Q5SR53 167 aa12.09□□□□□ -0.47
NCKIPSD-209ENST00000470006 UFSP1Q6NVU6 142 aa12.09□□□□□ -0.47
NCKIPSD-209ENST00000470006 HMGB3O15347 200 aaKnown RBP12.08□□□□□ -0.48
NCKIPSD-209ENST00000470006 LYRM1O43325 122 aa12.08□□□□□ -0.48
NCKIPSD-209ENST00000470006 RPL36AP83881 106 aaKnown RBP12.08□□□□□ -0.48
NCKIPSD-209ENST00000470006 RPL36ALQ969Q0 106 aaKnown RBP12.08□□□□□ -0.48
NCKIPSD-209ENST00000470006 A0A087WWL8 130 aa12.07□□□□□ -0.48
NCKIPSD-209ENST00000470006 TCRAP04437 139 aa12.07□□□□□ -0.48
NCKIPSD-209ENST00000470006 H2AFB2P0C5Z0 115 aa12.07□□□□□ -0.48
NCKIPSD-209ENST00000470006 FLI1Q01543 452 aaPredicted RBP12.07□□□□□ -0.48
NCKIPSD-209ENST00000470006 H3BVH4 76 aa12.06□□□□□ -0.48
NCKIPSD-209ENST00000470006 PLA2G10O15496 165 aa12.06□□□□□ -0.48
NCKIPSD-209ENST00000470006 MIAQ16674 131 aa12.06□□□□□ -0.48
NCKIPSD-209ENST00000470006 MPV17L2Q567V2 206 aa12.06□□□□□ -0.48
NCKIPSD-209ENST00000470006 LINC01600Q96MT4 127 aa12.06□□□□□ -0.48
NCKIPSD-209ENST00000470006 IGKV3D-20A0A0C4DH25 116 aa12.05□□□□□ -0.48
NCKIPSD-209ENST00000470006 SIX6O95475 246 aa12.05□□□□□ -0.48
NCKIPSD-209ENST00000470006 CLPSL2Q6UWE3 100 aa12.05□□□□□ -0.48
NCKIPSD-209ENST00000470006 C5orf17Q8NAS9 161 aa12.05□□□□□ -0.48
NCKIPSD-209ENST00000470006 OR11H4Q8NGC9 324 aa12.05□□□□□ -0.48
NCKIPSD-209ENST00000470006 C7orf33Q8WU49 177 aa12.05□□□□□ -0.48
NCKIPSD-209ENST00000470006 CHCHD5Q9BSY4 110 aa12.05□□□□□ -0.48
NCKIPSD-209ENST00000470006 SMIM3Q9BZL3 60 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms