RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 CXCL1P09341 107 aa10.46□□□□□ -0.73
COL9A3-209ENST00000469852 ERVFC1-1P60608 527 aa10.46□□□□□ -0.73
COL9A3-209ENST00000469852 ZFAND6Q6FIF0 208 aa10.46□□□□□ -0.73
COL9A3-209ENST00000469852 SCRT2Q9NQ03 307 aa10.46□□□□□ -0.73
COL9A3-209ENST00000469852 IL36BQ9NZH7 164 aa10.46□□□□□ -0.73
COL9A3-209ENST00000469852 NACAE9PAV3 2078 aa10.45□□□□□ -0.74
COL9A3-209ENST00000469852 MUC21A0A0G2JKD1 596 aa10.45□□□□□ -0.74
COL9A3-209ENST00000469852 MUC21A0A140T8X8 626 aa10.45□□□□□ -0.74
COL9A3-209ENST00000469852 GATCO43716 136 aaKnown RBP10.45□□□□□ -0.74
COL9A3-209ENST00000469852 IGLC6P0CF74 106 aa10.45□□□□□ -0.74
COL9A3-209ENST00000469852 LGALS9BQ3B8N2 356 aa10.45□□□□□ -0.74
COL9A3-209ENST00000469852 PHLDA1Q8WV24 401 aaPredicted RBP10.45□□□□□ -0.74
COL9A3-209ENST00000469852 RASL10AQ92737 203 aa10.45□□□□□ -0.74
COL9A3-209ENST00000469852 SNAI2O43623 268 aa10.44□□□□□ -0.74
COL9A3-209ENST00000469852 HTN3P15516 51 aa10.44□□□□□ -0.74
COL9A3-209ENST00000469852 ZNF876PQ49A33 203 aa10.44□□□□□ -0.74
COL9A3-209ENST00000469852 POM121L12Q8N7R1 296 aa10.44□□□□□ -0.74
COL9A3-209ENST00000469852 OR10AG1Q8NH19 301 aa10.44□□□□□ -0.74
COL9A3-209ENST00000469852 SFRP2Q96HF1 295 aa10.44□□□□□ -0.74
COL9A3-209ENST00000469852 OSTCQ9NRP0 149 aa10.44□□□□□ -0.74
COL9A3-209ENST00000469852 TRGV2A0A075B6R0 118 aa10.43□□□□□ -0.74
COL9A3-209ENST00000469852 F8W036 122 aa10.43□□□□□ -0.74
COL9A3-209ENST00000469852 IGHV3-53P01767 116 aa10.43□□□□□ -0.74
COL9A3-209ENST00000469852 MED14OSP0DP75 135 aa10.43□□□□□ -0.74
COL9A3-209ENST00000469852 RPS20P60866 119 aaKnown RBP10.43□□□□□ -0.74
COL9A3-209ENST00000469852 DMRTA1Q5VZB9 504 aa10.43□□□□□ -0.74
COL9A3-209ENST00000469852 GTSF1Q8WW33 167 aa10.43□□□□□ -0.74
COL9A3-209ENST00000469852 SSBP4Q9BWG4 385 aaPredicted RBP10.43□□□□□ -0.74
COL9A3-209ENST00000469852 JPT2Q9H910 190 aa10.43□□□□□ -0.74
COL9A3-209ENST00000469852 V9GYV3 84 aa10.43□□□□□ -0.74
COL9A3-209ENST00000469852 DEFB131BA0A096LNP1 70 aa10.42□□□□□ -0.74
COL9A3-209ENST00000469852 TRAV10A0A0B4J240 114 aa10.42□□□□□ -0.74
COL9A3-209ENST00000469852 OR5AL1P0C617 328 aa10.42□□□□□ -0.74
COL9A3-209ENST00000469852 HOXA5P20719 270 aa10.42□□□□□ -0.74
COL9A3-209ENST00000469852 SLC7A5P1Q8MH63 180 aa10.42□□□□□ -0.74
COL9A3-209ENST00000469852 FER1L6-AS1Q8NA97 138 aa10.42□□□□□ -0.74
COL9A3-209ENST00000469852 PTH2Q96A98 100 aa10.42□□□□□ -0.74
COL9A3-209ENST00000469852 ZNF479Q96JC4 524 aa10.42□□□□□ -0.74
COL9A3-209ENST00000469852 C18orf15Q96N68 181 aa10.42□□□□□ -0.74
COL9A3-209ENST00000469852 TPPP3Q9BW30 176 aa10.42□□□□□ -0.74
COL9A3-209ENST00000469852 M0R381 172 aa10.41□□□□□ -0.74
COL9A3-209ENST00000469852 ATP5G1P05496 136 aa10.41□□□□□ -0.74
COL9A3-209ENST00000469852 SSTP61278 116 aa10.41□□□□□ -0.74
COL9A3-209ENST00000469852 LYZL1Q6UWQ5 148 aa10.41□□□□□ -0.74
COL9A3-209ENST00000469852 OR10G8Q8NGN5 311 aa10.41□□□□□ -0.74
COL9A3-209ENST00000469852 SEC11CQ9BY50 192 aa10.41□□□□□ -0.74
COL9A3-209ENST00000469852 PHLDA3Q9Y5J5 127 aa10.41□□□□□ -0.74
COL9A3-209ENST00000469852 TENM2Q9NT68 2774 aa10.41□□□□□ -0.74
COL9A3-209ENST00000469852 XKRY2A2RUG3 117 aa10.4□□□□□ -0.74
COL9A3-209ENST00000469852 RS1O15537 224 aa10.4□□□□□ -0.74
COL9A3-209ENST00000469852 NXPH4O95158 308 aa10.4□□□□□ -0.74
COL9A3-209ENST00000469852 CT83Q5H943 113 aa10.4□□□□□ -0.74
COL9A3-209ENST00000469852 C10orf91Q5T1B1 145 aa10.4□□□□□ -0.74
COL9A3-209ENST00000469852 CFAP126Q5VTH2 177 aa10.4□□□□□ -0.74
COL9A3-209ENST00000469852 CEMP1Q6PRD7 247 aaPredicted RBP10.4□□□□□ -0.74
COL9A3-209ENST00000469852 C15orf54Q8N8G6 183 aa10.4□□□□□ -0.74
COL9A3-209ENST00000469852 SAMD10Q9BYL1 202 aa10.4□□□□□ -0.74
COL9A3-209ENST00000469852 TRAV4A0A0B4J268 109 aa10.39□□□□□ -0.75
COL9A3-209ENST00000469852 A8MWL6 223 aa10.39□□□□□ -0.75
COL9A3-209ENST00000469852 F5H768 121 aa10.39□□□□□ -0.75
COL9A3-209ENST00000469852 C3orf84H3BNL1 204 aa10.39□□□□□ -0.75
COL9A3-209ENST00000469852 CTRLP40313 264 aa10.39□□□□□ -0.75
COL9A3-209ENST00000469852 PNRC1Q12796 327 aaPredicted RBP10.39□□□□□ -0.75
COL9A3-209ENST00000469852 CASC10Q5T4H9 136 aa10.39□□□□□ -0.75
COL9A3-209ENST00000469852 MSRB1Q9NZV6 116 aa10.39□□□□□ -0.75
COL9A3-209ENST00000469852 RYR2Q92736 4967 aa10.39□□□□□ -0.75
COL9A3-209ENST00000469852 IGHV3-73A0A0B4J1V6 119 aa10.38□□□□□ -0.75
COL9A3-209ENST00000469852 FHL2Q14192 279 aa10.38□□□□□ -0.75
COL9A3-209ENST00000469852 RNF212Q495C1 297 aa10.38□□□□□ -0.75
COL9A3-209ENST00000469852 ZFP82Q8N141 532 aa10.38□□□□□ -0.75
COL9A3-209ENST00000469852 SYT8Q8NBV8 401 aa10.38□□□□□ -0.75
COL9A3-209ENST00000469852 OR4C5Q8NGB2 326 aa10.38□□□□□ -0.75
COL9A3-209ENST00000469852 TSKUQ8WUA8 353 aa10.38□□□□□ -0.75
COL9A3-209ENST00000469852 PGLYRP4Q96LB8 373 aa10.38□□□□□ -0.75
COL9A3-209ENST00000469852 CARHSP1Q9Y2V2 147 aaKnown RBP10.38□□□□□ -0.75
COL9A3-209ENST00000469852 A0A1W2PPQ1 181 aa10.37□□□□□ -0.75
COL9A3-209ENST00000469852 NUPR2A6NF83 97 aa10.37□□□□□ -0.75
COL9A3-209ENST00000469852 PIK3CD-AS1Q5SR53 167 aa10.37□□□□□ -0.75
COL9A3-209ENST00000469852 SPANXN1Q5VSR9 72 aa10.37□□□□□ -0.75
COL9A3-209ENST00000469852 UFSP1Q6NVU6 142 aa10.37□□□□□ -0.75
COL9A3-209ENST00000469852 TMEM88Q6PEY1 159 aa10.37□□□□□ -0.75
COL9A3-209ENST00000469852 LYSTQ99698 3801 aa10.37□□□□□ -0.75
COL9A3-209ENST00000469852 NDUFAF3Q9BU61 184 aa10.37□□□□□ -0.75
COL9A3-209ENST00000469852 A0A087WWL8 130 aa10.36□□□□□ -0.75
COL9A3-209ENST00000469852 HIGD1CA8MV81 97 aa10.36□□□□□ -0.75
COL9A3-209ENST00000469852 IGLL5B9A064 214 aa10.36□□□□□ -0.75
COL9A3-209ENST00000469852 FOXA3P55318 350 aaPredicted RBP10.36□□□□□ -0.75
COL9A3-209ENST00000469852 IGHV4-4A0A075B6R2 117 aa10.35□□□□□ -0.75
COL9A3-209ENST00000469852 TRAV26-1A0A087WT03 109 aa10.35□□□□□ -0.75
COL9A3-209ENST00000469852 A0A0J9YY99 117 aa10.35□□□□□ -0.75
COL9A3-209ENST00000469852 SMIM27A0A1W2PRY6 76 aa10.35□□□□□ -0.75
COL9A3-209ENST00000469852 A8MWV9 139 aa10.35□□□□□ -0.75
COL9A3-209ENST00000469852 F2Z2F3 143 aa10.35□□□□□ -0.75
COL9A3-209ENST00000469852 CRYGDP07320 174 aa10.35□□□□□ -0.75
COL9A3-209ENST00000469852 NTF3P20783 257 aa10.35□□□□□ -0.75
COL9A3-209ENST00000469852 Q6ZSN1 163 aa10.35□□□□□ -0.75
COL9A3-209ENST00000469852 NUP35Q8NFH5 326 aa10.35□□□□□ -0.75
COL9A3-209ENST00000469852 VSIG2Q96IQ7 327 aa10.35□□□□□ -0.75
COL9A3-209ENST00000469852 CNFNQ9BYD5 112 aa10.35□□□□□ -0.75
COL9A3-209ENST00000469852 GFRA4Q9GZZ7 299 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms