RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 CT83Q5H943 113 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 LINC01551Q86U37 167 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 OR2D3Q8NGH3 330 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 SSBP4Q9BWG4 385 aaPredicted RBP8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 PHLDA3Q9Y5J5 127 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 LINC00862A6NCI5 91 aa8.94□□□□□ -0.98
SPTLC1-204ENST00000469778 PGPEP1LA6NFU8 196 aa8.94□□□□□ -0.98
SPTLC1-204ENST00000469778 A8MWV9 139 aa8.94□□□□□ -0.98
SPTLC1-204ENST00000469778 H3BNG1 76 aa8.94□□□□□ -0.98
SPTLC1-204ENST00000469778 WDR73Q6P4I2 378 aa8.94□□□□□ -0.98
SPTLC1-204ENST00000469778 ZNF575Q86XF7 245 aa8.94□□□□□ -0.98
SPTLC1-204ENST00000469778 C15orf54Q8N8G6 183 aa8.94□□□□□ -0.98
SPTLC1-204ENST00000469778 NUDT10Q8NFP7 164 aa8.94□□□□□ -0.98
SPTLC1-204ENST00000469778 NUDT11Q96G61 164 aa8.94□□□□□ -0.98
SPTLC1-204ENST00000469778 OSTCQ9NRP0 149 aa8.94□□□□□ -0.98
SPTLC1-204ENST00000469778 TRAV4A0A0B4J268 109 aa8.93□□□□□ -0.98
SPTLC1-204ENST00000469778 FAM231BA6NCW3 169 aa8.93□□□□□ -0.98
SPTLC1-204ENST00000469778 A8MWL6 223 aa8.93□□□□□ -0.98
SPTLC1-204ENST00000469778 K7EN84 100 aa8.93□□□□□ -0.98
SPTLC1-204ENST00000469778 ERVFC1-1P60608 527 aa8.93□□□□□ -0.98
SPTLC1-204ENST00000469778 PNRC1Q12796 327 aaPredicted RBP8.93□□□□□ -0.98
SPTLC1-204ENST00000469778 ZFP82Q8N141 532 aa8.93□□□□□ -0.98
SPTLC1-204ENST00000469778 RPP21Q9H633 154 aaKnown RBP8.93□□□□□ -0.98
SPTLC1-204ENST00000469778 MRPL16Q9NX20 251 aaKnown RBP8.93□□□□□ -0.98
SPTLC1-204ENST00000469778 DNAH7Q8WXX0 4024 aa8.93□□□□□ -0.98
SPTLC1-204ENST00000469778 GRIFINA4D1Z8 144 aa8.92□□□□□ -0.98
SPTLC1-204ENST00000469778 F5H768 121 aa8.92□□□□□ -0.98
SPTLC1-204ENST00000469778 SNAI2O43623 268 aa8.92□□□□□ -0.98
SPTLC1-204ENST00000469778 SFTA3P0C7M3 94 aa8.92□□□□□ -0.98
SPTLC1-204ENST00000469778 ZFAND6Q6FIF0 208 aa8.92□□□□□ -0.98
SPTLC1-204ENST00000469778 ZFP2Q6ZN57 461 aa8.92□□□□□ -0.98
SPTLC1-204ENST00000469778 OR4C5Q8NGB2 326 aa8.92□□□□□ -0.98
SPTLC1-204ENST00000469778 GFRA4Q9GZZ7 299 aa8.92□□□□□ -0.98
SPTLC1-204ENST00000469778 TMSB15BA0A087X1C1 80 aa8.91□□□□□ -0.98
SPTLC1-204ENST00000469778 H3BVH4 76 aa8.91□□□□□ -0.98
SPTLC1-204ENST00000469778 GATCO43716 136 aaKnown RBP8.91□□□□□ -0.98
SPTLC1-204ENST00000469778 IGLC6P0CF74 106 aa8.91□□□□□ -0.98
SPTLC1-204ENST00000469778 RPL23P62829 140 aaKnown RBP8.91□□□□□ -0.98
SPTLC1-204ENST00000469778 CACNG7P62955 275 aa8.91□□□□□ -0.98
SPTLC1-204ENST00000469778 C15orf53Q8NAA6 179 aa8.91□□□□□ -0.98
SPTLC1-204ENST00000469778 RNASE7Q9H1E1 156 aaKnown RBP8.91□□□□□ -0.98
SPTLC1-204ENST00000469778 PRO0255Q9UI72 69 aa8.91□□□□□ -0.98
SPTLC1-204ENST00000469778 IGHV4-4A0A075B6R2 117 aa8.9□□□□□ -0.98
SPTLC1-204ENST00000469778 IGLL5B9A064 214 aa8.9□□□□□ -0.98
SPTLC1-204ENST00000469778 RHODO00212 210 aa8.9□□□□□ -0.98
SPTLC1-204ENST00000469778 RS1O15537 224 aa8.9□□□□□ -0.98
SPTLC1-204ENST00000469778 NXPH4O95158 308 aa8.9□□□□□ -0.98
SPTLC1-204ENST00000469778 HTN3P15516 51 aa8.9□□□□□ -0.98
SPTLC1-204ENST00000469778 FOXA3P55318 350 aaPredicted RBP8.9□□□□□ -0.98
SPTLC1-204ENST00000469778 RPL19P84098 196 aaKnown RBP8.9□□□□□ -0.98
SPTLC1-204ENST00000469778 FER1L6-AS1Q8NA97 138 aa8.9□□□□□ -0.98
SPTLC1-204ENST00000469778 ISOC2Q96AB3 205 aa8.9□□□□□ -0.98
SPTLC1-204ENST00000469778 SFRP2Q96HF1 295 aa8.9□□□□□ -0.98
SPTLC1-204ENST00000469778 TRGV4A0A0C4DH28 118 aa8.89□□□□□ -0.99
SPTLC1-204ENST00000469778 TMEM218A2RU14 115 aa8.89□□□□□ -0.99
SPTLC1-204ENST00000469778 PPP1R2P9O14990 202 aa8.89□□□□□ -0.99
SPTLC1-204ENST00000469778 FHL2Q14192 279 aa8.89□□□□□ -0.99
SPTLC1-204ENST00000469778 ADIRFQ15847 76 aa8.89□□□□□ -0.99
SPTLC1-204ENST00000469778 SPANXN1Q5VSR9 72 aa8.89□□□□□ -0.99
SPTLC1-204ENST00000469778 CFAP126Q5VTH2 177 aa8.89□□□□□ -0.99
SPTLC1-204ENST00000469778 DMRTA1Q5VZB9 504 aa8.89□□□□□ -0.99
SPTLC1-204ENST00000469778 COMMD7Q86VX2 200 aa8.89□□□□□ -0.99
SPTLC1-204ENST00000469778 OR10G8Q8NGN5 311 aa8.89□□□□□ -0.99
SPTLC1-204ENST00000469778 CNFNQ9BYD5 112 aa8.89□□□□□ -0.99
SPTLC1-204ENST00000469778 HHLA3Q9XRX5 114 aa8.89□□□□□ -0.99
SPTLC1-204ENST00000469778 CTRLP40313 264 aa8.88□□□□□ -0.99
SPTLC1-204ENST00000469778 POM121L12Q8N7R1 296 aa8.88□□□□□ -0.99
SPTLC1-204ENST00000469778 TSKUQ8WUA8 353 aa8.88□□□□□ -0.99
SPTLC1-204ENST00000469778 SEC11CQ9BY50 192 aa8.88□□□□□ -0.99
SPTLC1-204ENST00000469778 TRBV6-4A0A1B0GX49 114 aa8.87□□□□□ -0.99
SPTLC1-204ENST00000469778 M0R381 172 aa8.87□□□□□ -0.99
SPTLC1-204ENST00000469778 HOXA5P20719 270 aa8.87□□□□□ -0.99
SPTLC1-204ENST00000469778 TMEM88Q6PEY1 159 aa8.87□□□□□ -0.99
SPTLC1-204ENST00000469778 SH2D6Q7Z4S9 175 aa8.87□□□□□ -0.99
SPTLC1-204ENST00000469778 BORCS7Q96B45 105 aa8.87□□□□□ -0.99
SPTLC1-204ENST00000469778 ZNF479Q96JC4 524 aa8.87□□□□□ -0.99
SPTLC1-204ENST00000469778 APLNQ9ULZ1 77 aa8.87□□□□□ -0.99
SPTLC1-204ENST00000469778 MUC4Q99102 2169 aa8.86□□□□□ -0.99
SPTLC1-204ENST00000469778 TRAV26-1A0A087WT03 109 aa8.86□□□□□ -0.99
SPTLC1-204ENST00000469778 F8W036 122 aa8.86□□□□□ -0.99
SPTLC1-204ENST00000469778 PAX4O43316 350 aa8.86□□□□□ -0.99
SPTLC1-204ENST00000469778 MT-ND4LP03901 98 aa8.86□□□□□ -0.99
SPTLC1-204ENST00000469778 CRYBA4P53673 196 aa8.86□□□□□ -0.99
SPTLC1-204ENST00000469778 LYZL1Q6UWQ5 148 aa8.86□□□□□ -0.99
SPTLC1-204ENST00000469778 OR10AG1Q8NH19 301 aa8.86□□□□□ -0.99
SPTLC1-204ENST00000469778 ANAPC16Q96DE5 110 aa8.86□□□□□ -0.99
SPTLC1-204ENST00000469778 V9GYV3 84 aa8.86□□□□□ -0.99
SPTLC1-204ENST00000469778 IGHV3-53P01767 116 aa8.85□□□□□ -0.99
SPTLC1-204ENST00000469778 TRGC1P0CF51 173 aa8.85□□□□□ -0.99
SPTLC1-204ENST00000469778 SMIM17P0DL12 118 aa8.85□□□□□ -0.99
SPTLC1-204ENST00000469778 P0DMU3 169 aa8.85□□□□□ -0.99
SPTLC1-204ENST00000469778 FAM231AP0DMU4 169 aa8.85□□□□□ -0.99
SPTLC1-204ENST00000469778 FAM231CP0DMU5 169 aa8.85□□□□□ -0.99
SPTLC1-204ENST00000469778 GZMBP10144 247 aa8.85□□□□□ -0.99
SPTLC1-204ENST00000469778 SMIM15Q7Z3B0 74 aa8.85□□□□□ -0.99
SPTLC1-204ENST00000469778 GTSF1Q8WW33 167 aa8.85□□□□□ -0.99
SPTLC1-204ENST00000469778 AP1S3Q96PC3 154 aa8.85□□□□□ -0.99
SPTLC1-204ENST00000469778 PRADC1Q9BSG0 188 aa8.85□□□□□ -0.99
SPTLC1-204ENST00000469778 TPPP3Q9BW30 176 aa8.85□□□□□ -0.99
SPTLC1-204ENST00000469778 CRYGDP07320 174 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms