RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 FAM213BQ8TBF2 198 aa12.49□□□□□ -0.41
PHGDH-204ENST00000469443 MBD3L1Q8WWY6 194 aa12.49□□□□□ -0.41
PHGDH-204ENST00000469443 TRBV6-1A0A0K0K1D8 114 aa12.48□□□□□ -0.41
PHGDH-204ENST00000469443 LOC100131303A0A0U1RQF7 123 aa12.48□□□□□ -0.41
PHGDH-204ENST00000469443 S100A4P26447 101 aaKnown RBP12.48□□□□□ -0.41
PHGDH-204ENST00000469443 LINC00315P59091 139 aa12.48□□□□□ -0.41
PHGDH-204ENST00000469443 COX8CQ7Z4L0 72 aa12.48□□□□□ -0.41
PHGDH-204ENST00000469443 SH2D6Q7Z4S9 175 aa12.48□□□□□ -0.41
PHGDH-204ENST00000469443 SFT2D1Q8WV19 159 aa12.48□□□□□ -0.41
PHGDH-204ENST00000469443 ZC2HC1AQ96GY0 325 aa12.48□□□□□ -0.41
PHGDH-204ENST00000469443 PAGE4O60829 102 aa12.47□□□□□ -0.41
PHGDH-204ENST00000469443 PFDN1O60925 122 aa12.47□□□□□ -0.41
PHGDH-204ENST00000469443 CRIP1P50238 77 aa12.47□□□□□ -0.41
PHGDH-204ENST00000469443 TMUB2Q71RG4 321 aa12.47□□□□□ -0.41
PHGDH-204ENST00000469443 SLC25A29Q8N8R3 303 aa12.47□□□□□ -0.41
PHGDH-204ENST00000469443 TRBV6-4A0A1B0GX49 114 aa12.46□□□□□ -0.41
PHGDH-204ENST00000469443 B4DEV8 164 aa12.46□□□□□ -0.41
PHGDH-204ENST00000469443 ASIPP42127 132 aa12.46□□□□□ -0.41
PHGDH-204ENST00000469443 AKR1C3P42330 323 aa12.46□□□□□ -0.41
PHGDH-204ENST00000469443 NHLRC2Q8NBF2 726 aa12.46□□□□□ -0.41
PHGDH-204ENST00000469443 IL36BQ9NZH7 164 aa12.46□□□□□ -0.41
PHGDH-204ENST00000469443 LY96Q9Y6Y9 160 aa12.46□□□□□ -0.41
PHGDH-204ENST00000469443 A0A1B0GV50 99 aa12.45□□□□□ -0.42
PHGDH-204ENST00000469443 SH2D1AO60880 128 aa12.45□□□□□ -0.42
PHGDH-204ENST00000469443 LTAP01374 205 aa12.45□□□□□ -0.42
PHGDH-204ENST00000469443 TPT1P13693 172 aaKnown RBP12.45□□□□□ -0.42
PHGDH-204ENST00000469443 RHOHQ15669 191 aa12.45□□□□□ -0.42
PHGDH-204ENST00000469443 PIK3CD-AS1Q5SR53 167 aa12.45□□□□□ -0.42
PHGDH-204ENST00000469443 FAM162BQ5T6X4 162 aa12.45□□□□□ -0.42
PHGDH-204ENST00000469443 WFDC10BQ8IUB3 73 aa12.45□□□□□ -0.42
PHGDH-204ENST00000469443 PRADC1Q9BSG0 188 aa12.45□□□□□ -0.42
PHGDH-204ENST00000469443 TRAV9-2A0A087WT02 112 aa12.44□□□□□ -0.42
PHGDH-204ENST00000469443 IGHV3-73A0A0B4J1V6 119 aa12.44□□□□□ -0.42
PHGDH-204ENST00000469443 C16orf90A8MZG2 172 aa12.44□□□□□ -0.42
PHGDH-204ENST00000469443 KRBOX1C9JBD0 128 aa12.44□□□□□ -0.42
PHGDH-204ENST00000469443 H2AFB1P0C5Y9 115 aa12.44□□□□□ -0.42
PHGDH-204ENST00000469443 TIRAPP58753 221 aa12.44□□□□□ -0.42
PHGDH-204ENST00000469443 ZNF674Q2M3X9 581 aa12.44□□□□□ -0.42
PHGDH-204ENST00000469443 DNLZQ5SXM8 178 aa12.44□□□□□ -0.42
PHGDH-204ENST00000469443 Q6ZRN7 208 aaPredicted RBP12.44□□□□□ -0.42
PHGDH-204ENST00000469443 A8MWV9 139 aa12.43□□□□□ -0.42
PHGDH-204ENST00000469443 H3BVH4 76 aa12.43□□□□□ -0.42
PHGDH-204ENST00000469443 K7EP13 123 aa12.43□□□□□ -0.42
PHGDH-204ENST00000469443 M0R036 132 aa12.43□□□□□ -0.42
PHGDH-204ENST00000469443 MGST1P10620 155 aaKnown RBP12.43□□□□□ -0.42
PHGDH-204ENST00000469443 LGALSLQ3ZCW2 172 aaPredicted RBP12.43□□□□□ -0.42
PHGDH-204ENST00000469443 PARLQ9H300 379 aa12.43□□□□□ -0.42
PHGDH-204ENST00000469443 DNAH10OSP0CZ25 163 aa12.42□□□□□ -0.42
PHGDH-204ENST00000469443 ZFP2Q6ZN57 461 aa12.42□□□□□ -0.42
PHGDH-204ENST00000469443 LRP1BQ9NZR2 4599 aa12.41□□□□□ -0.42
PHGDH-204ENST00000469443 SCO2A0A1W2PP80 73 aa12.41□□□□□ -0.42
PHGDH-204ENST00000469443 GRIFINA4D1Z8 144 aa12.41□□□□□ -0.42
PHGDH-204ENST00000469443 S100A9P06702 114 aaKnown RBP12.41□□□□□ -0.42
PHGDH-204ENST00000469443 ARMS2P0C7Q2 107 aa12.41□□□□□ -0.42
PHGDH-204ENST00000469443 EVI2AP22794 236 aa12.41□□□□□ -0.42
PHGDH-204ENST00000469443 LINC01559Q495D7 138 aa12.41□□□□□ -0.42
PHGDH-204ENST00000469443 SPATA12Q7Z6I5 190 aa12.41□□□□□ -0.42
PHGDH-204ENST00000469443 NFE4Q86UQ8 179 aa12.41□□□□□ -0.42
PHGDH-204ENST00000469443 TCTE3Q8IZS6 198 aa12.4□□□□□ -0.42
PHGDH-204ENST00000469443 SYT8Q8NBV8 401 aa12.4□□□□□ -0.42
PHGDH-204ENST00000469443 TNFRSF18Q9Y5U5 241 aa12.4□□□□□ -0.42
PHGDH-204ENST00000469443 RAB5CP51148 216 aa12.39□□□□□ -0.43
PHGDH-204ENST00000469443 DMRTA1Q5VZB9 504 aa12.39□□□□□ -0.43
PHGDH-204ENST00000469443 EIF5AL1Q6IS14 154 aaKnown RBP12.39□□□□□ -0.43
PHGDH-204ENST00000469443 JPT2Q9H910 190 aa12.39□□□□□ -0.43
PHGDH-204ENST00000469443 TMSB15BA0A087X1C1 80 aa12.38□□□□□ -0.43
PHGDH-204ENST00000469443 IGHV3-38A0A0C4DH36 116 aa12.38□□□□□ -0.43
PHGDH-204ENST00000469443 UFSP1Q6NVU6 142 aa12.38□□□□□ -0.43
PHGDH-204ENST00000469443 Q6ZSN1 163 aa12.38□□□□□ -0.43
PHGDH-204ENST00000469443 C10orf126Q8N4M7 172 aa12.38□□□□□ -0.43
PHGDH-204ENST00000469443 ATP6V0E2Q8NHE4 81 aa12.38□□□□□ -0.43
PHGDH-204ENST00000469443 SAMD10Q9BYL1 202 aa12.38□□□□□ -0.43
PHGDH-204ENST00000469443 SCRT2Q9NQ03 307 aa12.38□□□□□ -0.43
PHGDH-204ENST00000469443 MSRB1Q9NZV6 116 aa12.38□□□□□ -0.43
PHGDH-204ENST00000469443 PHLDA3Q9Y5J5 127 aa12.38□□□□□ -0.43
PHGDH-204ENST00000469443 DNAH5Q8TE73 4624 aa12.37□□□□□ -0.43
PHGDH-204ENST00000469443 TRAV8-6A0A0B4J262 113 aa12.37□□□□□ -0.43
PHGDH-204ENST00000469443 RHODO00212 210 aa12.37□□□□□ -0.43
PHGDH-204ENST00000469443 CRYGDP07320 174 aa12.37□□□□□ -0.43
PHGDH-204ENST00000469443 BAGE2Q86Y30 109 aa12.37□□□□□ -0.43
PHGDH-204ENST00000469443 MLST8Q9BVC4 326 aa12.37□□□□□ -0.43
PHGDH-204ENST00000469443 MANBALQ9NQG1 85 aa12.37□□□□□ -0.43
PHGDH-204ENST00000469443 RYR1P21817 5038 aa12.37□□□□□ -0.43
PHGDH-204ENST00000469443 TRAV1-1A0A0B4J248 108 aa12.36□□□□□ -0.43
PHGDH-204ENST00000469443 KRTAP10-2P60368 255 aa12.36□□□□□ -0.43
PHGDH-204ENST00000469443 ERVFC1-1P60608 527 aa12.36□□□□□ -0.43
PHGDH-204ENST00000469443 CCL20P78556 96 aa12.36□□□□□ -0.43
PHGDH-204ENST00000469443 LINC01556Q5JQF7 62 aa12.36□□□□□ -0.43
PHGDH-204ENST00000469443 OR10J3Q5JRS4 329 aa12.36□□□□□ -0.43
PHGDH-204ENST00000469443 LELP1Q5T871 98 aa12.36□□□□□ -0.43
PHGDH-204ENST00000469443 Q6ZNX1 250 aa12.36□□□□□ -0.43
PHGDH-204ENST00000469443 KRTAP17-1Q9BYP8 105 aa12.36□□□□□ -0.43
PHGDH-204ENST00000469443 GTSF1LQ9H1H1 148 aa12.36□□□□□ -0.43
PHGDH-204ENST00000469443 GNG13Q9P2W3 67 aa12.36□□□□□ -0.43
PHGDH-204ENST00000469443 TEX46H3BTG2 121 aa12.35□□□□□ -0.43
PHGDH-204ENST00000469443 C1QBP02746 253 aa12.35□□□□□ -0.43
PHGDH-204ENST00000469443 SULT1A2P50226 295 aa12.35□□□□□ -0.43
PHGDH-204ENST00000469443 ZFP82Q8N141 532 aa12.35□□□□□ -0.43
PHGDH-204ENST00000469443 SFRP2Q96HF1 295 aa12.35□□□□□ -0.43
PHGDH-204ENST00000469443 M0R381 172 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms