RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 CD7P09564 240 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 SSTP61278 116 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 S100A12P80511 92 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 NIT1Q86X76 327 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 SYT8Q8NBV8 401 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 MRAP2Q96G30 205 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 FAM110AQ9BQ89 295 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 MAP1LC3AQ9H492 121 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 DPH3P1Q9H4G8 78 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 SCRT2Q9NQ03 307 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 ZNF256Q9Y2P7 627 aaPredicted RBP6.93□□□□□ -1.3
SMC1A-205ENST00000469129 KNCNA6PVL3 124 aa6.92□□□□□ -1.3
SMC1A-205ENST00000469129 M0R381 172 aa6.92□□□□□ -1.3
SMC1A-205ENST00000469129 INSP01308 110 aa6.92□□□□□ -1.3
SMC1A-205ENST00000469129 IGLV1-51P01701 117 aa6.92□□□□□ -1.3
SMC1A-205ENST00000469129 LINC00614P0C842 121 aa6.92□□□□□ -1.3
SMC1A-205ENST00000469129 KIR3DS1Q14943 382 aa6.92□□□□□ -1.3
SMC1A-205ENST00000469129 HIST2H2BDQ6DRA6 164 aa6.92□□□□□ -1.3
SMC1A-205ENST00000469129 PRSS3P2Q8NHM4 247 aa6.92□□□□□ -1.3
SMC1A-205ENST00000469129 RNF185Q96GF1 192 aa6.92□□□□□ -1.3
SMC1A-205ENST00000469129 AP5S1Q9NUS5 200 aa6.92□□□□□ -1.3
SMC1A-205ENST00000469129 MSRB1Q9NZV6 116 aa6.92□□□□□ -1.3
SMC1A-205ENST00000469129 TIMM8BQ9Y5J9 83 aaPredicted RBP6.92□□□□□ -1.3
SMC1A-205ENST00000469129 TRAV12-2A0A075B6T6 113 aa6.91□□□□□ -1.3
SMC1A-205ENST00000469129 SCGB1D1O95968 90 aa6.91□□□□□ -1.3
SMC1A-205ENST00000469129 PPP1R17O96001 155 aa6.91□□□□□ -1.3
SMC1A-205ENST00000469129 SMIM17P0DL12 118 aa6.91□□□□□ -1.3
SMC1A-205ENST00000469129 RNASE3P12724 160 aaKnown RBP6.91□□□□□ -1.3
SMC1A-205ENST00000469129 NUTF2P61970 127 aaKnown RBP6.91□□□□□ -1.3
SMC1A-205ENST00000469129 ODF3L2Q3SX64 289 aa6.91□□□□□ -1.3
SMC1A-205ENST00000469129 PRR31Q5SQ13 230 aa6.91□□□□□ -1.3
SMC1A-205ENST00000469129 Q6ZQT7 251 aa6.91□□□□□ -1.3
SMC1A-205ENST00000469129 Q6ZWC4 215 aa6.91□□□□□ -1.3
SMC1A-205ENST00000469129 STHQ8IWL8 128 aa6.91□□□□□ -1.3
SMC1A-205ENST00000469129 C9orf85Q96MD7 179 aa6.91□□□□□ -1.3
SMC1A-205ENST00000469129 LINC00467Q9BRT7 94 aa6.91□□□□□ -1.3
SMC1A-205ENST00000469129 NXT2Q9NPJ8 142 aaKnown RBP6.91□□□□□ -1.3
SMC1A-205ENST00000469129 WNK1Q9H4A3 2382 aa6.9□□□□□ -1.3
SMC1A-205ENST00000469129 IGHV3-16A0A0C4DH30 117 aa6.9□□□□□ -1.3
SMC1A-205ENST00000469129 IGHV1-24A0A0C4DH33 117 aa6.9□□□□□ -1.3
SMC1A-205ENST00000469129 GNRH2O43555 120 aa6.9□□□□□ -1.3
SMC1A-205ENST00000469129 NCR2O95944 276 aa6.9□□□□□ -1.3
SMC1A-205ENST00000469129 NPYP01303 97 aa6.9□□□□□ -1.3
SMC1A-205ENST00000469129 EVI2AP22794 236 aa6.9□□□□□ -1.3
SMC1A-205ENST00000469129 INSL3P51460 131 aa6.9□□□□□ -1.3
SMC1A-205ENST00000469129 ZNF415Q09FC8 603 aa6.9□□□□□ -1.3
SMC1A-205ENST00000469129 FAM19A2Q8N3H0 131 aa6.9□□□□□ -1.3
SMC1A-205ENST00000469129 LINC00482Q8N8I6 264 aa6.9□□□□□ -1.3
SMC1A-205ENST00000469129 URB1-AS1Q96HZ7 61 aa6.9□□□□□ -1.3
SMC1A-205ENST00000469129 GSN-AS1Q9NRJ2 163 aa6.9□□□□□ -1.3
SMC1A-205ENST00000469129 MUC4Q99102 2169 aa6.89□□□□□ -1.31
SMC1A-205ENST00000469129 C20orf202A1L168 122 aa6.89□□□□□ -1.31
SMC1A-205ENST00000469129 RBMY1BA6NDE4 496 aaKnown RBP6.89□□□□□ -1.31
SMC1A-205ENST00000469129 RBMY1EA6NEQ0 496 aaKnown RBP6.89□□□□□ -1.31
SMC1A-205ENST00000469129 CBY3A6NI87 242 aa6.89□□□□□ -1.31
SMC1A-205ENST00000469129 TSTD3H0UI37 97 aa6.89□□□□□ -1.31
SMC1A-205ENST00000469129 LEPROTL1O95214 131 aa6.89□□□□□ -1.31
SMC1A-205ENST00000469129 TNFRSF6BO95407 300 aa6.89□□□□□ -1.31
SMC1A-205ENST00000469129 RBMY1DP0C7P1 496 aaKnown RBP6.89□□□□□ -1.31
SMC1A-205ENST00000469129 KRTDAPP60985 99 aa6.89□□□□□ -1.31
SMC1A-205ENST00000469129 TRPT1Q86TN4 253 aaKnown RBP6.89□□□□□ -1.31
SMC1A-205ENST00000469129 Q8N1Y9 231 aa6.89□□□□□ -1.31
SMC1A-205ENST00000469129 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.89□□□□□ -1.31
SMC1A-205ENST00000469129 MDFIQ99750 246 aa6.89□□□□□ -1.31
SMC1A-205ENST00000469129 HSPB8Q9UJY1 196 aa6.89□□□□□ -1.31
SMC1A-205ENST00000469129 ATRQ13535 2644 aa6.89□□□□□ -1.31
SMC1A-205ENST00000469129 PRSS47A8MTI9 375 aa6.88□□□□□ -1.31
SMC1A-205ENST00000469129 SMKR1H3BMG3 65 aa6.88□□□□□ -1.31
SMC1A-205ENST00000469129 CRXO43186 299 aaPredicted RBP6.88□□□□□ -1.31
SMC1A-205ENST00000469129 HBDP02042 147 aa6.88□□□□□ -1.31
SMC1A-205ENST00000469129 MGPP08493 103 aa6.88□□□□□ -1.31
SMC1A-205ENST00000469129 BTF3P20290 206 aaKnown RBP6.88□□□□□ -1.31
SMC1A-205ENST00000469129 IFI27P40305 119 aaPredicted RBP6.88□□□□□ -1.31
SMC1A-205ENST00000469129 FXYD7P58549 80 aa6.88□□□□□ -1.31
SMC1A-205ENST00000469129 KRTAP10-3P60369 221 aa6.88□□□□□ -1.31
SMC1A-205ENST00000469129 BEAN1Q3B7T3 259 aa6.88□□□□□ -1.31
SMC1A-205ENST00000469129 C9orf66Q5T8R8 295 aa6.88□□□□□ -1.31
SMC1A-205ENST00000469129 DEFB125Q8N687 156 aa6.88□□□□□ -1.31
SMC1A-205ENST00000469129 TMEM70Q9BUB7 260 aa6.88□□□□□ -1.31
SMC1A-205ENST00000469129 LOC389332A0A1B0GUA5 103 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 LINC01546A6NGU7 62 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 PCP4L1A6NKN8 68 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 K7EMI3 77 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 C3orf79P0CE67 100 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 PKIAP61925 76 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 ZNF124Q15973 351 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 PMCHL1Q16048 86 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 PIK3CD-AS1Q5SR53 167 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 MORN3Q6PF18 240 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-205ENST00000469129 POM121L12Q8N7R1 296 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 Q8N8P6 123 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 TMEM158Q8WZ71 300 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 PTH2Q96A98 100 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 CITED1Q99966 193 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 C20orf78Q9BR46 151 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 NDUFAF3Q9BU61 184 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 MCRIP2Q9BUT9 160 aaKnown RBP6.87□□□□□ -1.31
SMC1A-205ENST00000469129 C1QTNF4Q9BXJ3 329 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 MAP1LC3CQ9BXW4 147 aa6.87□□□□□ -1.31
SMC1A-205ENST00000469129 FBN1P35555 2871 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms