RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 RBMY1A1P0DJD3 496 aaKnown RBP13.94□□□□□ -0.18
SMC4-209ENST00000468653 RBMY1CP0DJD4 496 aa13.94□□□□□ -0.18
SMC4-209ENST00000468653 RBMY1FQ15415 496 aaKnown RBP13.94□□□□□ -0.18
SMC4-209ENST00000468653 SPRY2O43597 315 aa13.93□□□□□ -0.18
SMC4-209ENST00000468653 INSP01308 110 aa13.93□□□□□ -0.18
SMC4-209ENST00000468653 Q8N1Y9 231 aa13.93□□□□□ -0.18
SMC4-209ENST00000468653 C18orf32Q8TCD1 76 aa13.93□□□□□ -0.18
SMC4-209ENST00000468653 WFDC10AQ9H1F0 79 aa13.93□□□□□ -0.18
SMC4-209ENST00000468653 IGHV3-16A0A0C4DH30 117 aa13.92□□□□□ -0.18
SMC4-209ENST00000468653 CBY3A6NI87 242 aa13.92□□□□□ -0.18
SMC4-209ENST00000468653 IQCJQ1A5X6 159 aa13.92□□□□□ -0.18
SMC4-209ENST00000468653 XCL2Q9UBD3 114 aa13.92□□□□□ -0.18
SMC4-209ENST00000468653 TRGV11A0A075B6L2 103 aa13.91□□□□□ -0.18
SMC4-209ENST00000468653 IFITM10A6NMD0 228 aa13.91□□□□□ -0.18
SMC4-209ENST00000468653 SERF1AO75920 110 aa13.91□□□□□ -0.18
SMC4-209ENST00000468653 C12orf54Q6X4T0 127 aa13.91□□□□□ -0.18
SMC4-209ENST00000468653 GTSCR1Q86UQ5 136 aa13.91□□□□□ -0.18
SMC4-209ENST00000468653 HTN1P15515 57 aa13.91□□□□□ -0.18
SMC4-209ENST00000468653 EVI2AP22794 236 aa13.91□□□□□ -0.18
SMC4-209ENST00000468653 MRPL51Q4U2R6 128 aaKnown RBP13.91□□□□□ -0.18
SMC4-209ENST00000468653 DMRTA1Q5VZB9 504 aa13.91□□□□□ -0.18
SMC4-209ENST00000468653 WFDC9Q8NEX5 89 aa13.91□□□□□ -0.18
SMC4-209ENST00000468653 C20orf144Q9BQM9 153 aa13.91□□□□□ -0.18
SMC4-209ENST00000468653 MDFICQ9P1T7 246 aa13.91□□□□□ -0.18
SMC4-209ENST00000468653 NUPR1O60356 82 aa13.9□□□□□ -0.18
SMC4-209ENST00000468653 FABP4P15090 132 aa13.9□□□□□ -0.18
SMC4-209ENST00000468653 LINC01587Q99440 93 aa13.9□□□□□ -0.18
SMC4-209ENST00000468653 D6R8Y8 96 aa13.89□□□□□ -0.19
SMC4-209ENST00000468653 RAB4AP20338 218 aa13.89□□□□□ -0.19
SMC4-209ENST00000468653 SHISA2Q6UWI4 295 aa13.89□□□□□ -0.19
SMC4-209ENST00000468653 ORMDL3Q8N138 153 aa13.89□□□□□ -0.19
SMC4-209ENST00000468653 RNF185Q96GF1 192 aa13.89□□□□□ -0.19
SMC4-209ENST00000468653 MAST4O15021 2626 aa13.89□□□□□ -0.19
SMC4-209ENST00000468653 RPL35AP18077 110 aaKnown RBP13.88□□□□□ -0.19
SMC4-209ENST00000468653 CKS2P33552 79 aa13.88□□□□□ -0.19
SMC4-209ENST00000468653 LINC00310P59036 64 aa13.88□□□□□ -0.19
SMC4-209ENST00000468653 C9orf85Q96MD7 179 aa13.88□□□□□ -0.19
SMC4-209ENST00000468653 RCHY1Q96PM5 261 aa13.88□□□□□ -0.19
SMC4-209ENST00000468653 HIST1H2BLQ99880 126 aa13.88□□□□□ -0.19
SMC4-209ENST00000468653 IGLL1P15814 213 aa13.88□□□□□ -0.19
SMC4-209ENST00000468653 TMEM158Q8WZ71 300 aa13.88□□□□□ -0.19
SMC4-209ENST00000468653 PRELID3AQ96N28 172 aa13.88□□□□□ -0.19
SMC4-209ENST00000468653 TMEM208Q9BTX3 173 aa13.88□□□□□ -0.19
SMC4-209ENST00000468653 U3KQK5 164 aa13.88□□□□□ -0.19
SMC4-209ENST00000468653 NOTCH3Q9UM47 2321 aa13.87□□□□□ -0.19
SMC4-209ENST00000468653 NXPH4O95158 308 aa13.87□□□□□ -0.19
SMC4-209ENST00000468653 DEFB125Q8N687 156 aa13.87□□□□□ -0.19
SMC4-209ENST00000468653 TMEM18Q96B42 140 aa13.87□□□□□ -0.19
SMC4-209ENST00000468653 ESDP10768 282 aa13.86□□□□□ -0.19
SMC4-209ENST00000468653 SYT8Q8NBV8 401 aa13.86□□□□□ -0.19
SMC4-209ENST00000468653 AP1S3Q96PC3 154 aa13.86□□□□□ -0.19
SMC4-209ENST00000468653 SMKR1H3BMG3 65 aa13.86□□□□□ -0.19
SMC4-209ENST00000468653 PPBPP02775 128 aa13.86□□□□□ -0.19
SMC4-209ENST00000468653 OR10D4PQ8NGN7 298 aa13.86□□□□□ -0.19
SMC4-209ENST00000468653 LINC00467Q9BRT7 94 aa13.86□□□□□ -0.19
SMC4-209ENST00000468653 VWFP04275 2813 aa13.85□□□□□ -0.19
SMC4-209ENST00000468653 NCR2O95944 276 aa13.85□□□□□ -0.19
SMC4-209ENST00000468653 RNASEKQ6P5S7 137 aaKnown RBP13.85□□□□□ -0.19
SMC4-209ENST00000468653 C14orf178Q8N769 122 aaPredicted RBP13.85□□□□□ -0.19
SMC4-209ENST00000468653 PACRGQ96M98 296 aaPredicted RBP13.85□□□□□ -0.19
SMC4-209ENST00000468653 SAMD10Q9BYL1 202 aa13.85□□□□□ -0.19
SMC4-209ENST00000468653 DPH3P1Q9H4G8 78 aa13.85□□□□□ -0.19
SMC4-209ENST00000468653 IGHV3OR16-12A0A075B7B8 117 aa13.84□□□□□ -0.19
SMC4-209ENST00000468653 MORN3Q6PF18 240 aaPredicted RBP13.84□□□□□ -0.19
SMC4-209ENST00000468653 NIT1Q86X76 327 aa13.84□□□□□ -0.19
SMC4-209ENST00000468653 PRM2P04554 102 aa13.83□□□□□ -0.19
SMC4-209ENST00000468653 ZNF415Q09FC8 603 aa13.83□□□□□ -0.19
SMC4-209ENST00000468653 C1orf158Q8N1D5 194 aa13.83□□□□□ -0.19
SMC4-209ENST00000468653 C1QTNF4Q9BXJ3 329 aa13.83□□□□□ -0.19
SMC4-209ENST00000468653 MUC4Q99102 2169 aa13.83□□□□□ -0.2
SMC4-209ENST00000468653 SMIM17P0DL12 118 aa13.83□□□□□ -0.2
SMC4-209ENST00000468653 GIG44P09565 113 aaPredicted RBP13.82□□□□□ -0.2
SMC4-209ENST00000468653 GOLT1BQ9Y3E0 138 aa13.82□□□□□ -0.2
SMC4-209ENST00000468653 FBN1P35555 2871 aaKnown RBP13.82□□□□□ -0.2
SMC4-209ENST00000468653 HSBP1O75506 76 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 NPYP01303 97 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 MGPP08493 103 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 PMCHP20382 165 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 PRSS3P2Q8NHM4 247 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 LAMTOR2Q9Y2Q5 125 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 LOC389332A0A1B0GUA5 103 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 WIPF1O43516 503 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 LINC00614P0C842 121 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 AMTP48728 403 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 ZNF876PQ49A33 203 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 CHCHD1Q96BP2 118 aaKnown RBP13.81□□□□□ -0.2
SMC4-209ENST00000468653 MRAP2Q96G30 205 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 JPT2Q9H910 190 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 GSN-AS1Q9NRJ2 163 aa13.81□□□□□ -0.2
SMC4-209ENST00000468653 TRAV26-2A0A0B4J265 109 aa13.8□□□□□ -0.2
SMC4-209ENST00000468653 GAS8-AS1O95177 125 aa13.8□□□□□ -0.2
SMC4-209ENST00000468653 URB1-AS1Q96HZ7 61 aa13.8□□□□□ -0.2
SMC4-209ENST00000468653 TNFRSF6BO95407 300 aa13.79□□□□□ -0.2
SMC4-209ENST00000468653 GATA1P15976 413 aaPredicted RBP13.79□□□□□ -0.2
SMC4-209ENST00000468653 FA2HQ7L5A8 372 aa13.79□□□□□ -0.2
SMC4-209ENST00000468653 A0A087WWL8 130 aa13.78□□□□□ -0.2
SMC4-209ENST00000468653 M0R2P5 195 aa13.78□□□□□ -0.2
SMC4-209ENST00000468653 FAM19A2Q8N3H0 131 aa13.78□□□□□ -0.2
SMC4-209ENST00000468653 CSTL1Q9H114 145 aa13.78□□□□□ -0.2
SMC4-209ENST00000468653 MAP1LC3AQ9H492 121 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms