RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 PGPEP1LA6NFU8 196 aa11.68□□□□□ -0.54
SSBP1-207ENST00000468267 CIDEAO60543 219 aa11.68□□□□□ -0.54
SSBP1-207ENST00000468267 ZNF506Q5JVG8 444 aa11.68□□□□□ -0.54
SSBP1-207ENST00000468267 FAM213BQ8TBF2 198 aa11.68□□□□□ -0.54
SSBP1-207ENST00000468267 SFT2D1Q8WV19 159 aa11.68□□□□□ -0.54
SSBP1-207ENST00000468267 FMC1Q96HJ9 113 aa11.68□□□□□ -0.54
SSBP1-207ENST00000468267 TRBV6-1A0A0K0K1D8 114 aa11.67□□□□□ -0.54
SSBP1-207ENST00000468267 LOC100131303A0A0U1RQF7 123 aa11.67□□□□□ -0.54
SSBP1-207ENST00000468267 CRIP1P50238 77 aa11.67□□□□□ -0.54
SSBP1-207ENST00000468267 TMUB2Q71RG4 321 aa11.67□□□□□ -0.54
SSBP1-207ENST00000468267 SH2D6Q7Z4S9 175 aa11.67□□□□□ -0.54
SSBP1-207ENST00000468267 ZNF575Q86XF7 245 aa11.67□□□□□ -0.54
SSBP1-207ENST00000468267 ZC2HC1AQ96GY0 325 aa11.67□□□□□ -0.54
SSBP1-207ENST00000468267 PAGE4O60829 102 aa11.66□□□□□ -0.54
SSBP1-207ENST00000468267 LINC00315P59091 139 aa11.66□□□□□ -0.54
SSBP1-207ENST00000468267 UBE2G1P62253 170 aa11.66□□□□□ -0.54
SSBP1-207ENST00000468267 EIF5AP63241 154 aaKnown RBP11.66□□□□□ -0.54
SSBP1-207ENST00000468267 LCE2CQ5TA81 110 aa11.66□□□□□ -0.54
SSBP1-207ENST00000468267 SLC25A29Q8N8R3 303 aa11.66□□□□□ -0.54
SSBP1-207ENST00000468267 RYR1P21817 5038 aa11.65□□□□□ -0.54
SSBP1-207ENST00000468267 B4DEV8 164 aa11.65□□□□□ -0.54
SSBP1-207ENST00000468267 KRBOX1C9JBD0 128 aa11.65□□□□□ -0.54
SSBP1-207ENST00000468267 PFDN1O60925 122 aa11.65□□□□□ -0.54
SSBP1-207ENST00000468267 LTAP01374 205 aa11.65□□□□□ -0.54
SSBP1-207ENST00000468267 S100A4P26447 101 aaKnown RBP11.65□□□□□ -0.54
SSBP1-207ENST00000468267 ASIPP42127 132 aa11.65□□□□□ -0.54
SSBP1-207ENST00000468267 PIK3CD-AS1Q5SR53 167 aa11.65□□□□□ -0.54
SSBP1-207ENST00000468267 FAM162BQ5T6X4 162 aa11.65□□□□□ -0.54
SSBP1-207ENST00000468267 DNAH5Q8TE73 4624 aa11.64□□□□□ -0.55
SSBP1-207ENST00000468267 IGHV3-73A0A0B4J1V6 119 aa11.64□□□□□ -0.55
SSBP1-207ENST00000468267 A0A1B0GV50 99 aa11.64□□□□□ -0.55
SSBP1-207ENST00000468267 TRBV6-4A0A1B0GX49 114 aa11.64□□□□□ -0.55
SSBP1-207ENST00000468267 SH2D1AO60880 128 aa11.64□□□□□ -0.55
SSBP1-207ENST00000468267 TIRAPP58753 221 aa11.64□□□□□ -0.55
SSBP1-207ENST00000468267 DNLZQ5SXM8 178 aa11.64□□□□□ -0.55
SSBP1-207ENST00000468267 NHLRC2Q8NBF2 726 aa11.64□□□□□ -0.55
SSBP1-207ENST00000468267 PRADC1Q9BSG0 188 aa11.64□□□□□ -0.55
SSBP1-207ENST00000468267 IL36BQ9NZH7 164 aa11.64□□□□□ -0.55
SSBP1-207ENST00000468267 HSPG2P98160 4391 aa11.64□□□□□ -0.55
SSBP1-207ENST00000468267 TRAV9-2A0A087WT02 112 aa11.63□□□□□ -0.55
SSBP1-207ENST00000468267 J3QL48 77 aa11.63□□□□□ -0.55
SSBP1-207ENST00000468267 H2AFB1P0C5Y9 115 aa11.63□□□□□ -0.55
SSBP1-207ENST00000468267 TPT1P13693 172 aaKnown RBP11.63□□□□□ -0.55
SSBP1-207ENST00000468267 AKR1C3P42330 323 aa11.63□□□□□ -0.55
SSBP1-207ENST00000468267 RHOHQ15669 191 aa11.63□□□□□ -0.55
SSBP1-207ENST00000468267 ZNF674Q2M3X9 581 aa11.63□□□□□ -0.55
SSBP1-207ENST00000468267 LGALSLQ3ZCW2 172 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-207ENST00000468267 Q6ZRN7 208 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-207ENST00000468267 WFDC10BQ8IUB3 73 aa11.63□□□□□ -0.55
SSBP1-207ENST00000468267 LY96Q9Y6Y9 160 aa11.63□□□□□ -0.55
SSBP1-207ENST00000468267 A8MWV9 139 aa11.62□□□□□ -0.55
SSBP1-207ENST00000468267 C16orf90A8MZG2 172 aa11.62□□□□□ -0.55
SSBP1-207ENST00000468267 K7EP13 123 aa11.62□□□□□ -0.55
SSBP1-207ENST00000468267 M0R036 132 aa11.62□□□□□ -0.55
SSBP1-207ENST00000468267 S100A9P06702 114 aaKnown RBP11.62□□□□□ -0.55
SSBP1-207ENST00000468267 ZFP2Q6ZN57 461 aa11.62□□□□□ -0.55
SSBP1-207ENST00000468267 PARLQ9H300 379 aa11.62□□□□□ -0.55
SSBP1-207ENST00000468267 H3BVH4 76 aa11.61□□□□□ -0.55
SSBP1-207ENST00000468267 DNAH10OSP0CZ25 163 aa11.61□□□□□ -0.55
SSBP1-207ENST00000468267 MGST1P10620 155 aaKnown RBP11.61□□□□□ -0.55
SSBP1-207ENST00000468267 EVI2AP22794 236 aa11.61□□□□□ -0.55
SSBP1-207ENST00000468267 Q6ZSN1 163 aa11.61□□□□□ -0.55
SSBP1-207ENST00000468267 SCO2A0A1W2PP80 73 aa11.6□□□□□ -0.55
SSBP1-207ENST00000468267 GRIFINA4D1Z8 144 aa11.6□□□□□ -0.55
SSBP1-207ENST00000468267 ARMS2P0C7Q2 107 aa11.6□□□□□ -0.55
SSBP1-207ENST00000468267 LINC01559Q495D7 138 aa11.6□□□□□ -0.55
SSBP1-207ENST00000468267 SPATA12Q7Z6I5 190 aa11.6□□□□□ -0.55
SSBP1-207ENST00000468267 TCTE3Q8IZS6 198 aa11.6□□□□□ -0.55
SSBP1-207ENST00000468267 TNFRSF18Q9Y5U5 241 aa11.6□□□□□ -0.55
SSBP1-207ENST00000468267 UFSP1Q6NVU6 142 aa11.59□□□□□ -0.55
SSBP1-207ENST00000468267 NFE4Q86UQ8 179 aa11.59□□□□□ -0.55
SSBP1-207ENST00000468267 JPT2Q9H910 190 aa11.59□□□□□ -0.55
SSBP1-207ENST00000468267 SCRT2Q9NQ03 307 aa11.59□□□□□ -0.55
SSBP1-207ENST00000468267 APOBP04114 4563 aaKnown RBP11.58□□□□□ -0.56
SSBP1-207ENST00000468267 TMSB15BA0A087X1C1 80 aa11.58□□□□□ -0.56
SSBP1-207ENST00000468267 TRAV1-1A0A0B4J248 108 aa11.58□□□□□ -0.56
SSBP1-207ENST00000468267 RAB5CP51148 216 aa11.58□□□□□ -0.56
SSBP1-207ENST00000468267 CCL20P78556 96 aa11.58□□□□□ -0.56
SSBP1-207ENST00000468267 EIF5AL1Q6IS14 154 aaKnown RBP11.58□□□□□ -0.56
SSBP1-207ENST00000468267 SYT8Q8NBV8 401 aa11.58□□□□□ -0.56
SSBP1-207ENST00000468267 MLST8Q9BVC4 326 aa11.58□□□□□ -0.56
SSBP1-207ENST00000468267 SAMD10Q9BYL1 202 aa11.58□□□□□ -0.56
SSBP1-207ENST00000468267 MSRB1Q9NZV6 116 aa11.58□□□□□ -0.56
SSBP1-207ENST00000468267 PCLOQ9Y6V0 5065 aa11.58□□□□□ -0.56
SSBP1-207ENST00000468267 CRYGDP07320 174 aa11.57□□□□□ -0.56
SSBP1-207ENST00000468267 KRTAP10-2P60368 255 aa11.57□□□□□ -0.56
SSBP1-207ENST00000468267 Q6ZNX1 250 aa11.57□□□□□ -0.56
SSBP1-207ENST00000468267 BAGE2Q86Y30 109 aa11.57□□□□□ -0.56
SSBP1-207ENST00000468267 ATP6V0E2Q8NHE4 81 aa11.57□□□□□ -0.56
SSBP1-207ENST00000468267 PHLDA3Q9Y5J5 127 aa11.57□□□□□ -0.56
SSBP1-207ENST00000468267 TRAV8-6A0A0B4J262 113 aa11.56□□□□□ -0.56
SSBP1-207ENST00000468267 IGHV3-38A0A0C4DH36 116 aa11.56□□□□□ -0.56
SSBP1-207ENST00000468267 C10orf126Q8N4M7 172 aa11.56□□□□□ -0.56
SSBP1-207ENST00000468267 GTSF1LQ9H1H1 148 aa11.56□□□□□ -0.56
SSBP1-207ENST00000468267 MANBALQ9NQG1 85 aa11.56□□□□□ -0.56
SSBP1-207ENST00000468267 RHODO00212 210 aa11.55□□□□□ -0.56
SSBP1-207ENST00000468267 C1QBP02746 253 aa11.55□□□□□ -0.56
SSBP1-207ENST00000468267 SULT1A2P50226 295 aa11.55□□□□□ -0.56
SSBP1-207ENST00000468267 LINC01556Q5JQF7 62 aa11.55□□□□□ -0.56
SSBP1-207ENST00000468267 OR10J3Q5JRS4 329 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms