RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 M0R381 172 aa15.08■□□□□ 0
TMEM53-207ENST00000468117 HTN1P15515 57 aa15.08■□□□□ 0
TMEM53-207ENST00000468117 IGLL1P15814 213 aa15.08■□□□□ 0
TMEM53-207ENST00000468117 C12orf54Q6X4T0 127 aa15.08■□□□□ 0
TMEM53-207ENST00000468117 IGHV4-4A0A075B6R2 117 aa15.07■□□□□ 0
TMEM53-207ENST00000468117 MED14OSP0DP75 135 aa15.07■□□□□ 0
TMEM53-207ENST00000468117 CACNG7P62955 275 aa15.07■□□□□ 0
TMEM53-207ENST00000468117 FAM104BQ5XKR9 115 aa15.07■□□□□ 0
TMEM53-207ENST00000468117 MCRIP2Q9BUT9 160 aaKnown RBP15.07■□□□□ 0
TMEM53-207ENST00000468117 TMEM191AQ9H0A3 160 aa15.07■□□□□ 0
TMEM53-207ENST00000468117 MDFICQ9P1T7 246 aa15.07■□□□□ 0
TMEM53-207ENST00000468117 IGHV3-16A0A0C4DH30 117 aa15.07■□□□□ 0
TMEM53-207ENST00000468117 TMEM256Q8N2U0 113 aa15.07■□□□□ 0
TMEM53-207ENST00000468117 INSP01308 110 aa15.06■□□□□ 0
TMEM53-207ENST00000468117 SHISA2Q6UWI4 295 aa15.06■□□□□ 0
TMEM53-207ENST00000468117 HIST3H2BBQ8N257 126 aa15.06■□□□□ 0
TMEM53-207ENST00000468117 DEFB125Q8N687 156 aa15.06■□□□□ 0
TMEM53-207ENST00000468117 CBY3A6NI87 242 aa15.05■□□□□ 0
TMEM53-207ENST00000468117 PRM2P04554 102 aa15.05■□□□□ 0
TMEM53-207ENST00000468117 RPL35AP18077 110 aaKnown RBP15.05■□□□□ 0
TMEM53-207ENST00000468117 EVI2AP22794 236 aa15.05■□□□□ 0
TMEM53-207ENST00000468117 NUTF2P61970 127 aaKnown RBP15.05■□□□□ 0
TMEM53-207ENST00000468117 Q0VG73 95 aa15.05■□□□□ 0
TMEM53-207ENST00000468117 GTSCR1Q86UQ5 136 aa15.05■□□□□ 0
TMEM53-207ENST00000468117 C18orf32Q8TCD1 76 aa15.05■□□□□ 0
TMEM53-207ENST00000468117 IFITM10A6NMD0 228 aa15.05■□□□□ -0
TMEM53-207ENST00000468117 IQCJQ1A5X6 159 aa15.05■□□□□ -0
TMEM53-207ENST00000468117 BAGE3Q86Y29 109 aa15.05■□□□□ -0
TMEM53-207ENST00000468117 TMEM158Q8WZ71 300 aa15.05■□□□□ -0
TMEM53-207ENST00000468117 NUPR1O60356 82 aa15.04■□□□□ -0
TMEM53-207ENST00000468117 OR10J3Q5JRS4 329 aa15.04■□□□□ -0
TMEM53-207ENST00000468117 DMRTA1Q5VZB9 504 aa15.04■□□□□ -0
TMEM53-207ENST00000468117 LINC00310P59036 64 aa15.04■□□□□ -0
TMEM53-207ENST00000468117 MRPL51Q4U2R6 128 aaKnown RBP15.04■□□□□ -0
TMEM53-207ENST00000468117 LINC01587Q99440 93 aa15.04■□□□□ -0
TMEM53-207ENST00000468117 AMBPP02760 352 aa15.03■□□□□ -0
TMEM53-207ENST00000468117 C9orf85Q96MD7 179 aa15.03■□□□□ -0
TMEM53-207ENST00000468117 RCHY1Q96PM5 261 aa15.03■□□□□ -0
TMEM53-207ENST00000468117 SERF1AO75920 110 aa15.02■□□□□ -0
TMEM53-207ENST00000468117 AKR1D1P51857 326 aa15.02■□□□□ -0
TMEM53-207ENST00000468117 RNF185Q96GF1 192 aa15.02■□□□□ -0
TMEM53-207ENST00000468117 C20orf144Q9BQM9 153 aa15.02■□□□□ -0
TMEM53-207ENST00000468117 TRGV11A0A075B6L2 103 aa15.02□□□□□ -0.01
TMEM53-207ENST00000468117 D6R8Y8 96 aa15.02□□□□□ -0.01
TMEM53-207ENST00000468117 GIG44P09565 113 aaPredicted RBP15.02□□□□□ -0.01
TMEM53-207ENST00000468117 RAB4AP20338 218 aa15.02□□□□□ -0.01
TMEM53-207ENST00000468117 SMIM15Q7Z3B0 74 aa15.02□□□□□ -0.01
TMEM53-207ENST00000468117 CMYA5Q8N3K9 4069 aa15.01□□□□□ -0.01
TMEM53-207ENST00000468117 TMEM208Q9BTX3 173 aa15.01□□□□□ -0.01
TMEM53-207ENST00000468117 IGHV3OR16-12A0A075B7B8 117 aa15□□□□□ -0.01
TMEM53-207ENST00000468117 S100A2P29034 98 aa15□□□□□ -0.01
TMEM53-207ENST00000468117 C1orf158Q8N1D5 194 aa15□□□□□ -0.01
TMEM53-207ENST00000468117 SMKR1H3BMG3 65 aa15□□□□□ -0.01
TMEM53-207ENST00000468117 NXPH4O95158 308 aa15□□□□□ -0.01
TMEM53-207ENST00000468117 WIPF1O43516 503 aa14.99□□□□□ -0.01
TMEM53-207ENST00000468117 NCR2O95944 276 aa14.99□□□□□ -0.01
TMEM53-207ENST00000468117 FABP4P15090 132 aa14.99□□□□□ -0.01
TMEM53-207ENST00000468117 CKS2P33552 79 aa14.99□□□□□ -0.01
TMEM53-207ENST00000468117 ORMDL3Q8N138 153 aa14.99□□□□□ -0.01
TMEM53-207ENST00000468117 C14orf178Q8N769 122 aaPredicted RBP14.99□□□□□ -0.01
TMEM53-207ENST00000468117 U3KQK5 164 aa14.99□□□□□ -0.01
TMEM53-207ENST00000468117 HIST1H2BLQ99880 126 aa14.98□□□□□ -0.01
TMEM53-207ENST00000468117 GAS8-AS1O95177 125 aa14.97□□□□□ -0.01
TMEM53-207ENST00000468117 PRELID3AQ96N28 172 aa14.97□□□□□ -0.01
TMEM53-207ENST00000468117 LINC00467Q9BRT7 94 aa14.97□□□□□ -0.01
TMEM53-207ENST00000468117 JPT2Q9H910 190 aa14.97□□□□□ -0.01
TMEM53-207ENST00000468117 AP1S3Q96PC3 154 aa14.97□□□□□ -0.01
TMEM53-207ENST00000468117 OXLD1Q5BKU9 147 aa14.96□□□□□ -0.01
TMEM53-207ENST00000468117 MORN3Q6PF18 240 aaPredicted RBP14.96□□□□□ -0.01
TMEM53-207ENST00000468117 TRAV26-2A0A0B4J265 109 aa14.95□□□□□ -0.02
TMEM53-207ENST00000468117 ESDP10768 282 aa14.95□□□□□ -0.02
TMEM53-207ENST00000468117 AZU1P20160 251 aa14.95□□□□□ -0.02
TMEM53-207ENST00000468117 DPH3P1Q9H4G8 78 aa14.95□□□□□ -0.02
TMEM53-207ENST00000468117 GSN-AS1Q9NRJ2 163 aa14.95□□□□□ -0.02
TMEM53-207ENST00000468117 ZNF876PQ49A33 203 aa14.95□□□□□ -0.02
TMEM53-207ENST00000468117 SYT8Q8NBV8 401 aa14.95□□□□□ -0.02
TMEM53-207ENST00000468117 URB1-AS1Q96HZ7 61 aa14.95□□□□□ -0.02
TMEM53-207ENST00000468117 C1QTNF4Q9BXJ3 329 aa14.95□□□□□ -0.02
TMEM53-207ENST00000468117 NPYP01303 97 aa14.94□□□□□ -0.02
TMEM53-207ENST00000468117 GATA1P15976 413 aaPredicted RBP14.94□□□□□ -0.02
TMEM53-207ENST00000468117 ZNF415Q09FC8 603 aa14.94□□□□□ -0.02
TMEM53-207ENST00000468117 NIT1Q86X76 327 aa14.94□□□□□ -0.02
TMEM53-207ENST00000468117 C11orf72Q8NBR9 251 aa14.94□□□□□ -0.02
TMEM53-207ENST00000468117 CSNK1G2-AS1Q8NCQ2 148 aa14.94□□□□□ -0.02
TMEM53-207ENST00000468117 RNASEKQ6P5S7 137 aaKnown RBP14.93□□□□□ -0.02
TMEM53-207ENST00000468117 NBEAL2Q6ZNJ1 2754 aa14.93□□□□□ -0.02
TMEM53-207ENST00000468117 ANK2Q01484 3957 aa14.93□□□□□ -0.02
TMEM53-207ENST00000468117 PPBPP02775 128 aa14.93□□□□□ -0.02
TMEM53-207ENST00000468117 OR10D4PQ8NGN7 298 aa14.93□□□□□ -0.02
TMEM53-207ENST00000468117 TMEM18Q96B42 140 aa14.93□□□□□ -0.02
TMEM53-207ENST00000468117 KIF25-AS1Q9Y6Z4 181 aa14.93□□□□□ -0.02
TMEM53-207ENST00000468117 A0A087WWL8 130 aa14.92□□□□□ -0.02
TMEM53-207ENST00000468117 MGPP08493 103 aa14.92□□□□□ -0.02
TMEM53-207ENST00000468117 PACRGQ96M98 296 aaPredicted RBP14.92□□□□□ -0.02
TMEM53-207ENST00000468117 CSTL1Q9H114 145 aa14.92□□□□□ -0.02
TMEM53-207ENST00000468117 GOLT1BQ9Y3E0 138 aa14.92□□□□□ -0.02
TMEM53-207ENST00000468117 LOC389332A0A1B0GUA5 103 aa14.92□□□□□ -0.02
TMEM53-207ENST00000468117 SMIM17P0DL12 118 aa14.92□□□□□ -0.02
TMEM53-207ENST00000468117 NACAE9PAV3 2078 aa14.91□□□□□ -0.02
TMEM53-207ENST00000468117 SAMD10Q9BYL1 202 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms