RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 TRPT1Q86TN4 253 aaKnown RBP10.87□□□□□ -0.67
DDX56-208ENST00000467318 GTSF1Q8WW33 167 aa10.87□□□□□ -0.67
DDX56-208ENST00000467318 LINC00477Q96M19 166 aa10.87□□□□□ -0.67
DDX56-208ENST00000467318 LOC102724200A0A096LPH7 203 aaPredicted RBP10.86□□□□□ -0.67
DDX56-208ENST00000467318 A0A1B0GUT8 65 aa10.86□□□□□ -0.67
DDX56-208ENST00000467318 A8MTW9 85 aa10.86□□□□□ -0.67
DDX56-208ENST00000467318 C3orf79P0CE67 100 aa10.86□□□□□ -0.67
DDX56-208ENST00000467318 CT45A10P0DMU9 189 aa10.86□□□□□ -0.67
DDX56-208ENST00000467318 SAPCD1Q5SSQ6 148 aa10.86□□□□□ -0.67
DDX56-208ENST00000467318 Q8N976 141 aa10.86□□□□□ -0.67
DDX56-208ENST00000467318 GATD1Q8NB37 220 aa10.86□□□□□ -0.67
DDX56-208ENST00000467318 AGRNO00468 2067 aa10.86□□□□□ -0.67
DDX56-208ENST00000467318 IGKV2-40A0A087WW87 121 aaPredicted RBP10.85□□□□□ -0.67
DDX56-208ENST00000467318 IGKV2D-40P01614 121 aaPredicted RBP10.85□□□□□ -0.67
DDX56-208ENST00000467318 OR5AL1P0C617 328 aa10.85□□□□□ -0.67
DDX56-208ENST00000467318 DEFB121Q5J5C9 76 aa10.85□□□□□ -0.67
DDX56-208ENST00000467318 TMEM78Q5T7P6 136 aa10.85□□□□□ -0.67
DDX56-208ENST00000467318 RNASEKQ6P5S7 137 aaKnown RBP10.85□□□□□ -0.67
DDX56-208ENST00000467318 SSBP4Q9BWG4 385 aaPredicted RBP10.85□□□□□ -0.67
DDX56-208ENST00000467318 PAM16Q9Y3D7 125 aa10.85□□□□□ -0.67
DDX56-208ENST00000467318 RBMY1BA6NDE4 496 aaKnown RBP10.85□□□□□ -0.67
DDX56-208ENST00000467318 RBMY1EA6NEQ0 496 aaKnown RBP10.85□□□□□ -0.67
DDX56-208ENST00000467318 RBMY1DP0C7P1 496 aaKnown RBP10.85□□□□□ -0.67
DDX56-208ENST00000467318 BTF3P20290 206 aaKnown RBP10.85□□□□□ -0.67
DDX56-208ENST00000467318 MORN3Q6PF18 240 aaPredicted RBP10.85□□□□□ -0.67
DDX56-208ENST00000467318 COX8CQ7Z4L0 72 aa10.85□□□□□ -0.67
DDX56-208ENST00000467318 KIR2DL5BQ8NHK3 375 aa10.85□□□□□ -0.67
DDX56-208ENST00000467318 ODF3Q96PU9 254 aa10.85□□□□□ -0.67
DDX56-208ENST00000467318 AGPAT4-IT1Q9H0P7 198 aa10.85□□□□□ -0.67
DDX56-208ENST00000467318 PPP1R14DQ9NXH3 145 aa10.85□□□□□ -0.67
DDX56-208ENST00000467318 TRAV8-1A0A0A6YYK1 113 aa10.84□□□□□ -0.67
DDX56-208ENST00000467318 APOC4P55056 127 aa10.84□□□□□ -0.67
DDX56-208ENST00000467318 RPS20P60866 119 aaKnown RBP10.84□□□□□ -0.67
DDX56-208ENST00000467318 SPATA45Q537H7 98 aa10.84□□□□□ -0.67
DDX56-208ENST00000467318 FAM19A2Q8N3H0 131 aa10.84□□□□□ -0.67
DDX56-208ENST00000467318 MRAPQ8TCY5 172 aa10.84□□□□□ -0.67
DDX56-208ENST00000467318 ZC2HC1AQ96GY0 325 aa10.84□□□□□ -0.67
DDX56-208ENST00000467318 VGLL1Q99990 258 aa10.84□□□□□ -0.67
DDX56-208ENST00000467318 SNHG12Q9BXW3 62 aa10.84□□□□□ -0.67
DDX56-208ENST00000467318 UQCR10Q9UDW1 63 aa10.84□□□□□ -0.67
DDX56-208ENST00000467318 LENEPQ9Y5L5 61 aa10.84□□□□□ -0.67
DDX56-208ENST00000467318 MEGF8Q7Z7M0 2845 aa10.84□□□□□ -0.67
DDX56-208ENST00000467318 TRBV7-9A0A0J9YWB2 115 aa10.83□□□□□ -0.68
DDX56-208ENST00000467318 IGKV3-20P01619 116 aa10.83□□□□□ -0.68
DDX56-208ENST00000467318 RPL35AP18077 110 aaKnown RBP10.83□□□□□ -0.68
DDX56-208ENST00000467318 CTRLP40313 264 aa10.83□□□□□ -0.68
DDX56-208ENST00000467318 ERCC8Q13216 396 aa10.83□□□□□ -0.68
DDX56-208ENST00000467318 CSTL1Q9H114 145 aa10.83□□□□□ -0.68
DDX56-208ENST00000467318 ZNF138P52744 262 aa10.82□□□□□ -0.68
DDX56-208ENST00000467318 TDRG1Q3Y452 100 aa10.82□□□□□ -0.68
DDX56-208ENST00000467318 AMTNQ6UX39 209 aa10.82□□□□□ -0.68
DDX56-208ENST00000467318 C1QTNF4Q9BXJ3 329 aa10.82□□□□□ -0.68
DDX56-208ENST00000467318 LINC00614P0C842 121 aa10.82□□□□□ -0.68
DDX56-208ENST00000467318 TSPOP30536 169 aa10.82□□□□□ -0.68
DDX56-208ENST00000467318 TMEM189A5PLL7 270 aa10.81□□□□□ -0.68
DDX56-208ENST00000467318 EREGO14944 169 aa10.81□□□□□ -0.68
DDX56-208ENST00000467318 CDKN1BP46527 198 aa10.81□□□□□ -0.68
DDX56-208ENST00000467318 TMEM70Q9BUB7 260 aa10.81□□□□□ -0.68
DDX56-208ENST00000467318 TRAV9-2A0A087WT02 112 aa10.8□□□□□ -0.68
DDX56-208ENST00000467318 LEPP41159 167 aa10.8□□□□□ -0.68
DDX56-208ENST00000467318 ZNF493Q6ZR52 646 aa10.8□□□□□ -0.68
DDX56-208ENST00000467318 FAM19A4Q96LR4 140 aa10.8□□□□□ -0.68
DDX56-208ENST00000467318 TCAPO15273 167 aa10.79□□□□□ -0.68
DDX56-208ENST00000467318 SPINK13Q1W4C9 94 aa10.79□□□□□ -0.68
DDX56-208ENST00000467318 CRXO43186 299 aaPredicted RBP10.79□□□□□ -0.68
DDX56-208ENST00000467318 LEPROTL1O95214 131 aa10.79□□□□□ -0.68
DDX56-208ENST00000467318 IGLC3P0DOY3 106 aa10.79□□□□□ -0.68
DDX56-208ENST00000467318 Q8TAT8 98 aa10.79□□□□□ -0.68
DDX56-208ENST00000467318 HSPB8Q9UJY1 196 aa10.79□□□□□ -0.68
DDX56-208ENST00000467318 GIG44P09565 113 aaPredicted RBP10.78□□□□□ -0.68
DDX56-208ENST00000467318 CRIP1P50238 77 aa10.78□□□□□ -0.68
DDX56-208ENST00000467318 URB1-AS1Q96HZ7 61 aa10.78□□□□□ -0.68
DDX56-208ENST00000467318 XCL2Q9UBD3 114 aa10.78□□□□□ -0.68
DDX56-208ENST00000467318 KLLNB2CW77 178 aa10.77□□□□□ -0.69
DDX56-208ENST00000467318 ARMS2P0C7Q2 107 aa10.77□□□□□ -0.69
DDX56-208ENST00000467318 FXYD7P58549 80 aa10.77□□□□□ -0.69
DDX56-208ENST00000467318 PET117Q6UWS5 81 aa10.77□□□□□ -0.69
DDX56-208ENST00000467318 MAP1LC3CQ9BXW4 147 aa10.77□□□□□ -0.69
DDX56-208ENST00000467318 TMEM191AQ9H0A3 160 aa10.77□□□□□ -0.69
DDX56-208ENST00000467318 FBN3Q75N90 2809 aa10.77□□□□□ -0.69
DDX56-208ENST00000467318 SH2D1AO60880 128 aa10.76□□□□□ -0.69
DDX56-208ENST00000467318 HNRNPA3P51991 378 aaKnown RBP10.76□□□□□ -0.69
DDX56-208ENST00000467318 ZFAND2AQ8N6M9 145 aa10.76□□□□□ -0.69
DDX56-208ENST00000467318 B9D2Q9BPU9 175 aa10.76□□□□□ -0.69
DDX56-208ENST00000467318 MRPS16Q9Y3D3 137 aaKnown RBP10.76□□□□□ -0.69
DDX56-208ENST00000467318 IGHV1-24A0A0C4DH33 117 aa10.76□□□□□ -0.69
DDX56-208ENST00000467318 COL5A1-AS1Q5SY13 56 aa10.76□□□□□ -0.69
DDX56-208ENST00000467318 Q6ZN92 141 aa10.76□□□□□ -0.69
DDX56-208ENST00000467318 SBSPONQ8IVN8 264 aa10.76□□□□□ -0.69
DDX56-208ENST00000467318 CSNK1G2-AS1Q8NCQ2 148 aa10.76□□□□□ -0.69
DDX56-208ENST00000467318 C8orf49Q96NF6 230 aa10.76□□□□□ -0.69
DDX56-208ENST00000467318 TRAV12-2A0A075B6T6 113 aa10.75□□□□□ -0.69
DDX56-208ENST00000467318 SYS1-DBNDD2H3BUS1 97 aa10.75□□□□□ -0.69
DDX56-208ENST00000467318 INSP01308 110 aa10.75□□□□□ -0.69
DDX56-208ENST00000467318 FA2HQ7L5A8 372 aa10.75□□□□□ -0.69
DDX56-208ENST00000467318 TP53TG1Q9Y2A0 90 aa10.75□□□□□ -0.69
DDX56-208ENST00000467318 C7orf71A4D174 169 aa10.74□□□□□ -0.69
DDX56-208ENST00000467318 FABP5P3A8MUU1 101 aa10.74□□□□□ -0.69
DDX56-208ENST00000467318 HSBP1L1C9JCN9 74 aa10.74□□□□□ -0.69
DDX56-208ENST00000467318 J3KRW8 73 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms