RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 ATP5EP56381 51 aaPredicted RBP2.27□□□□□ -2.05
VPS13D-203ENST00000466732 FXYD6P3P58550 94 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 UBE2D3P61077 147 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 SNRPD3P62318 126 aaKnown RBP2.27□□□□□ -2.05
VPS13D-203ENST00000466732 UBE2D2P62837 147 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 SUPT4H1P63272 117 aaKnown RBP2.27□□□□□ -2.05
VPS13D-203ENST00000466732 ADIGQ0VDE8 80 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 ZNF56Q15929 161 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 CENPWQ5EE01 88 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 DEFB121Q5J5C9 76 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 UNQ9165/PRO28630Q6UXU0 137 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 FP248Q71RG6 208 aaPredicted RBP2.27□□□□□ -2.05
VPS13D-203ENST00000466732 ATP5L2Q7Z4Y8 100 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 C5orf38Q86SI9 138 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 LINC00643Q86TS7 51 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 RPP25LQ8N5L8 163 aaKnown RBP2.27□□□□□ -2.05
VPS13D-203ENST00000466732 Q8N9W7 124 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 DCANP1Q8TF63 244 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 SLC25A2Q9BXI2 301 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 C11orf68Q9H3H3 251 aaKnown RBP2.27□□□□□ -2.05
VPS13D-203ENST00000466732 C11orf1Q9H5F2 150 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 ANAPC10Q9UM13 185 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 COL18A1P39060 1754 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 LRP4O75096 1905 aa2.27□□□□□ -2.05
VPS13D-203ENST00000466732 KIAA1549LQ6ZVL6 1849 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 IGKV2-28A0A075B6P5 120 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 IGHV3OR15-7A0A075B7D8 119 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 TRAV41A0A0B4J266 112 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 CTXND1A0A1B0GTU2 59 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 H3BMM0 161 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 H3BP45 60 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 UPK2O00526 184 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 FFAR1O14842 300 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 SLC25A20O43772 301 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 IGKV2D-28P01615 120 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 ZNF823P16415 610 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 PCBD1P61457 104 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 TMEM155Q4W5P6 130 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 MIC13Q5XKP0 118 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 CEMP1Q6PRD7 247 aaPredicted RBP2.26□□□□□ -2.05
VPS13D-203ENST00000466732 LINC00596Q86U02 117 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 PDPNQ86YL7 162 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 OR8A1Q8NGG7 326 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 OR5C1Q8NGR4 320 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 UBE2WQ96B02 151 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 FAM3DQ96BQ1 224 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 SPACA5Q96QH8 159 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 METTL26Q96S19 204 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 OSTCQ9NRP0 149 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 TIMM9Q9Y5J7 89 aa2.26□□□□□ -2.05
VPS13D-203ENST00000466732 GOLGA4Q13439 2230 aaKnown RBP2.26□□□□□ -2.05
VPS13D-203ENST00000466732 ZNF831Q5JPB2 1677 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 TRBV27A0A0K0K1C4 114 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 C19orf71A6NCJ1 209 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 C9JCJ5 164 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 H3BVH4 76 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 M0R378 163 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 UBE2L6O14933 153 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 ZNF73O43830 326 aaPredicted RBP2.25□□□□□ -2.05
VPS13D-203ENST00000466732 MGST1P10620 155 aaKnown RBP2.25□□□□□ -2.05
VPS13D-203ENST00000466732 SLC25A16P16260 332 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 COX7A1P24310 79 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 DYNLT3P51808 116 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 ZNF136P52737 540 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 SYNJ2BPP57105 145 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 RPL18Q07020 188 aaKnown RBP2.25□□□□□ -2.05
VPS13D-203ENST00000466732 ABCA11PQ4W5N1 156 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 FAM222AQ5U5X8 452 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 FAM104BQ5XKR9 115 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 ZFP2Q6ZN57 461 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 VN1R4Q7Z5H5 301 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 MARCH3Q86UD3 253 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 C6orf223Q8N319 242 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 MORN4Q8NDC4 146 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 CCL17Q92583 94 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 IFI27L1Q96BM0 104 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 PGLYRP4Q96LB8 373 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 TMEM243Q9BU79 118 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 PLA2G12AQ9BZM1 189 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 CYSTM1Q9H1C7 97 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 HEATR1Q9H583 2144 aaKnown RBP2.25□□□□□ -2.05
VPS13D-203ENST00000466732 CALYQ9NYX4 217 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 SLC25A15Q9Y619 301 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 V9GYV3 84 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 LTBP2Q14767 1821 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 MYOFQ9NZM1 2061 aa2.25□□□□□ -2.05
VPS13D-203ENST00000466732 TNS1Q9HBL0 1735 aaKnown RBP2.25□□□□□ -2.05
VPS13D-203ENST00000466732 MPDZO75970 2070 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.24□□□□□ -2.05
VPS13D-203ENST00000466732 TRBV7-3A0A075B6L6 115 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 TRBV25-1A0A075B6N4 114 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 TMSB15BA0A087X1C1 80 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 LOC107984156A0A0G2JMH3 177 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 SMIM27A0A1W2PRY6 76 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 CRYM-AS1A6NIL9 109 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 C11orf94C9JXX5 98 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 TIMM17BO60830 172 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 HBDP02042 147 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 NPPCP23582 126 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms