RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 C9orf85Q96MD7 179 aa8.82□□□□□ -1
VPS16-206ENST00000466415 SSBP4Q9BWG4 385 aaPredicted RBP8.82□□□□□ -1
VPS16-206ENST00000466415 MDFICQ9P1T7 246 aa8.82□□□□□ -1
VPS16-206ENST00000466415 TRAPPC1Q9Y5R8 145 aa8.82□□□□□ -1
VPS16-206ENST00000466415 STAB1Q9NY15 2570 aa8.82□□□□□ -1
VPS16-206ENST00000466415 COL6A5A8TX70 2615 aa8.82□□□□□ -1
VPS16-206ENST00000466415 TRRAPQ9Y4A5 3859 aa8.81□□□□□ -1
VPS16-206ENST00000466415 SORL1Q92673 2214 aa8.81□□□□□ -1
VPS16-206ENST00000466415 TRGC1P0CF51 173 aa8.81□□□□□ -1
VPS16-206ENST00000466415 NTF3P20783 257 aa8.81□□□□□ -1
VPS16-206ENST00000466415 DEFB135Q30KP9 77 aa8.81□□□□□ -1
VPS16-206ENST00000466415 KPRPQ5T749 579 aaPredicted RBP8.81□□□□□ -1
VPS16-206ENST00000466415 ZNF705AQ6ZN79 300 aaPredicted RBP8.81□□□□□ -1
VPS16-206ENST00000466415 ZNF575Q86XF7 245 aa8.81□□□□□ -1
VPS16-206ENST00000466415 TMEM263Q8WUH6 116 aaKnown RBP8.81□□□□□ -1
VPS16-206ENST00000466415 C16orf74Q96GX8 76 aa8.81□□□□□ -1
VPS16-206ENST00000466415 RCHY1Q96PM5 261 aa8.81□□□□□ -1
VPS16-206ENST00000466415 GNB1LQ9BYB4 327 aa8.81□□□□□ -1
VPS16-206ENST00000466415 CNFNQ9BYD5 112 aa8.81□□□□□ -1
VPS16-206ENST00000466415 SCRT2Q9NQ03 307 aa8.81□□□□□ -1
VPS16-206ENST00000466415 VWFP04275 2813 aa8.81□□□□□ -1
VPS16-206ENST00000466415 C1orf196B1AJZ1 125 aa8.8□□□□□ -1
VPS16-206ENST00000466415 PRM2P04554 102 aa8.8□□□□□ -1
VPS16-206ENST00000466415 FRMD6-AS1P0C7T7 363 aa8.8□□□□□ -1
VPS16-206ENST00000466415 TMEM136Q6ZRR5 245 aa8.8□□□□□ -1
VPS16-206ENST00000466415 AP1S3Q96PC3 154 aa8.8□□□□□ -1
VPS16-206ENST00000466415 SPXQ9BT56 116 aa8.8□□□□□ -1
VPS16-206ENST00000466415 MRPL18Q9H0U6 180 aaKnown RBP8.8□□□□□ -1
VPS16-206ENST00000466415 GSN-AS1Q9NRJ2 163 aa8.8□□□□□ -1
VPS16-206ENST00000466415 IGHV4-4A0A075B6R2 117 aa8.79□□□□□ -1
VPS16-206ENST00000466415 SPRY2O43597 315 aa8.79□□□□□ -1
VPS16-206ENST00000466415 PRB2P02812 416 aaPredicted RBP8.79□□□□□ -1
VPS16-206ENST00000466415 SMIM17P0DL12 118 aa8.79□□□□□ -1
VPS16-206ENST00000466415 AZU1P20160 251 aa8.79□□□□□ -1
VPS16-206ENST00000466415 FABP9Q0Z7S8 132 aa8.79□□□□□ -1
VPS16-206ENST00000466415 ZNF493Q6ZR52 646 aa8.79□□□□□ -1
VPS16-206ENST00000466415 CMYA5Q8N3K9 4069 aa8.79□□□□□ -1
VPS16-206ENST00000466415 SMIM9A6NGZ8 99 aa8.78□□□□□ -1
VPS16-206ENST00000466415 M0R2P5 195 aa8.78□□□□□ -1
VPS16-206ENST00000466415 NXPH4O95158 308 aa8.78□□□□□ -1
VPS16-206ENST00000466415 APCSP02743 223 aa8.78□□□□□ -1
VPS16-206ENST00000466415 TRGC2P03986 189 aa8.78□□□□□ -1
VPS16-206ENST00000466415 RAB5BP61020 215 aa8.78□□□□□ -1
VPS16-206ENST00000466415 Q6ZWC4 215 aa8.78□□□□□ -1
VPS16-206ENST00000466415 C11orf72Q8NBR9 251 aa8.78□□□□□ -1
VPS16-206ENST00000466415 RNASE8Q8TDE3 154 aaKnown RBP8.78□□□□□ -1
VPS16-206ENST00000466415 ZNF876PQ49A33 203 aa8.77□□□□□ -1.01
VPS16-206ENST00000466415 DEFB121Q5J5C9 76 aa8.77□□□□□ -1.01
VPS16-206ENST00000466415 DMRTA1Q5VZB9 504 aa8.77□□□□□ -1.01
VPS16-206ENST00000466415 GATD1Q8NB37 220 aa8.77□□□□□ -1.01
VPS16-206ENST00000466415 OR11H2Q8NH07 326 aa8.77□□□□□ -1.01
VPS16-206ENST00000466415 TMEM191AQ9H0A3 160 aa8.77□□□□□ -1.01
VPS16-206ENST00000466415 MSRB1Q9NZV6 116 aa8.77□□□□□ -1.01
VPS16-206ENST00000466415 TMA7Q9Y2S6 64 aaKnown RBP8.77□□□□□ -1.01
VPS16-206ENST00000466415 K7EIL1 84 aa8.76□□□□□ -1.01
VPS16-206ENST00000466415 MGPP08493 103 aa8.76□□□□□ -1.01
VPS16-206ENST00000466415 RNF183Q96D59 192 aa8.76□□□□□ -1.01
VPS16-206ENST00000466415 DPH3P1Q9H4G8 78 aa8.76□□□□□ -1.01
VPS16-206ENST00000466415 MRPL16Q9NX20 251 aaKnown RBP8.76□□□□□ -1.01
VPS16-206ENST00000466415 X6R8D5 127 aa8.76□□□□□ -1.01
VPS16-206ENST00000466415 NOTCH3Q9UM47 2321 aa8.76□□□□□ -1.01
VPS16-206ENST00000466415 TRGV1A0A0A0MS02 117 aa8.75□□□□□ -1.01
VPS16-206ENST00000466415 MIFP14174 115 aa8.75□□□□□ -1.01
VPS16-206ENST00000466415 EVI2AP22794 236 aa8.75□□□□□ -1.01
VPS16-206ENST00000466415 EMP1P54849 157 aa8.75□□□□□ -1.01
VPS16-206ENST00000466415 SLAQ13239 276 aa8.75□□□□□ -1.01
VPS16-206ENST00000466415 FAM104BQ5XKR9 115 aa8.75□□□□□ -1.01
VPS16-206ENST00000466415 AMN1Q8IY45 258 aa8.75□□□□□ -1.01
VPS16-206ENST00000466415 C14orf178Q8N769 122 aaPredicted RBP8.75□□□□□ -1.01
VPS16-206ENST00000466415 IL17DQ8TAD2 202 aa8.75□□□□□ -1.01
VPS16-206ENST00000466415 PTH2Q96A98 100 aa8.75□□□□□ -1.01
VPS16-206ENST00000466415 NOP10Q9NPE3 64 aaKnown RBP8.75□□□□□ -1.01
VPS16-206ENST00000466415 TP53TG1Q9Y2A0 90 aa8.75□□□□□ -1.01
VPS16-206ENST00000466415 A8MWV9 139 aa8.74□□□□□ -1.01
VPS16-206ENST00000466415 DAZ2Q13117 558 aaKnown RBP8.74□□□□□ -1.01
VPS16-206ENST00000466415 KIAA1644Q3SXP7 199 aa8.74□□□□□ -1.01
VPS16-206ENST00000466415 PIK3CD-AS1Q5SR53 167 aa8.74□□□□□ -1.01
VPS16-206ENST00000466415 FAM74A4Q5TZK3 123 aa8.74□□□□□ -1.01
VPS16-206ENST00000466415 NDUFAF3Q9BU61 184 aa8.74□□□□□ -1.01
VPS16-206ENST00000466415 IGHV4-28A0A0C4DH34 117 aa8.73□□□□□ -1.01
VPS16-206ENST00000466415 LGALS9BQ3B8N2 356 aa8.73□□□□□ -1.01
VPS16-206ENST00000466415 MRAPQ8TCY5 172 aa8.73□□□□□ -1.01
VPS16-206ENST00000466415 RETNQ9HD89 108 aa8.73□□□□□ -1.01
VPS16-206ENST00000466415 A0A087WWL8 130 aa8.72□□□□□ -1.01
VPS16-206ENST00000466415 PLAC8L1A1L4L8 177 aa8.72□□□□□ -1.01
VPS16-206ENST00000466415 SRIP30626 198 aa8.72□□□□□ -1.01
VPS16-206ENST00000466415 CKS2P33552 79 aa8.72□□□□□ -1.01
VPS16-206ENST00000466415 ZNF56Q15929 161 aa8.72□□□□□ -1.01
VPS16-206ENST00000466415 MRPL51Q4U2R6 128 aaKnown RBP8.72□□□□□ -1.01
VPS16-206ENST00000466415 OVOL2Q9BRP0 275 aa8.72□□□□□ -1.01
VPS16-206ENST00000466415 JPT2Q9H910 190 aa8.72□□□□□ -1.01
VPS16-206ENST00000466415 TRGV2A0A075B6R0 118 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 GAGE12BA1L429 117 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 D6R8Y8 96 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 F5H697 171 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 RHODO00212 210 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 GAGE7O76087 117 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 GAGE12FP0CL80 117 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 GAGE12GP0CL81 117 aa8.71□□□□□ -1.02
VPS16-206ENST00000466415 GAGE12IP0CL82 117 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms