RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 ST20Q9HBF5 79 aa4.49□□□□□ -1.69
CHMP3-206ENST00000466032 OSTCQ9NRP0 149 aa4.49□□□□□ -1.69
CHMP3-206ENST00000466032 ZNF492Q9P255 531 aa4.49□□□□□ -1.69
CHMP3-206ENST00000466032 HLA-DRB4X5D2U9 266 aa4.49□□□□□ -1.69
CHMP3-206ENST00000466032 DNHD1Q96M86 4753 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 IGKV3-7A0A075B6H7 116 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 TRAV21A0A0B4J279 112 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 GAGE12BA1L429 117 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 FABP5P3A8MUU1 101 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 ZNF688P0C7X2 276 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 RPL23P62829 140 aaKnown RBP4.48□□□□□ -1.69
CHMP3-206ENST00000466032 HIST1H1AQ02539 215 aaPredicted RBP4.48□□□□□ -1.69
CHMP3-206ENST00000466032 ADIRFQ15847 76 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 Q6AWC8 147 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 MORN3Q6PF18 240 aaPredicted RBP4.48□□□□□ -1.69
CHMP3-206ENST00000466032 RASL11AQ6T310 242 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 Q6ZWC4 215 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 PRNTQ86SH4 94 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 APRG1Q8IVJ8 170 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 STHQ8IWL8 128 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 RNF182Q8N6D2 247 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 OCC1Q8TAD7 63 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 SFRP2Q96HF1 295 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 MAP6D1Q9H9H5 199 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 URGCP-MRPS24S4R325 110 aa4.48□□□□□ -1.69
CHMP3-206ENST00000466032 ZNF705FA8MVS1 300 aaPredicted RBP4.47□□□□□ -1.69
CHMP3-206ENST00000466032 A8MWL6 223 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 H3BMM0 161 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 CRXO43186 299 aaPredicted RBP4.47□□□□□ -1.69
CHMP3-206ENST00000466032 TSPAN13O95857 204 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 IGLV2-11P01706 119 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 P01737 135 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 GPX1P07203 203 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 ZNF705DP0CH99 300 aaPredicted RBP4.47□□□□□ -1.69
CHMP3-206ENST00000466032 ZNF705BP0CI00 300 aaPredicted RBP4.47□□□□□ -1.69
CHMP3-206ENST00000466032 MGST1P10620 155 aaKnown RBP4.47□□□□□ -1.69
CHMP3-206ENST00000466032 TFPI2P48307 235 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 DEFB131AP59861 70 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 GNG5P63218 68 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 IBA57Q5T440 356 aaKnown RBP4.47□□□□□ -1.69
CHMP3-206ENST00000466032 UFSP1Q6NVU6 142 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 TMEM256Q8N2U0 113 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 Q8N976 141 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 KCNS1Q96KK3 526 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 FAM19A4Q96LR4 140 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 DERL1Q9BUN8 251 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 GFRA4Q9GZZ7 299 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 AGPAT4-IT1Q9H0P7 198 aa4.47□□□□□ -1.69
CHMP3-206ENST00000466032 TRBV20OR9-2A0A075B6H5 130 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 TRAV9-2A0A087WT02 112 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 IGKV2-40A0A087WW87 121 aaPredicted RBP4.46□□□□□ -1.7
CHMP3-206ENST00000466032 TRAV34A0A0B4J273 112 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 KLLNB2CW77 178 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 IGKV2D-40P01614 121 aaPredicted RBP4.46□□□□□ -1.7
CHMP3-206ENST00000466032 EGFEM1PQ0D2K5 195 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 RNF151Q2KHN1 245 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 SPATA45Q537H7 98 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 Q6ZN92 141 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 FER1L6-AS1Q8NA97 138 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 KIR2DL5BQ8NHK3 375 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 LINC00479Q96M42 142 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 VGLL1Q99990 258 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 SPATA25Q9BR10 227 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 GNB1LQ9BYB4 327 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 FBN1P35555 2871 aaKnown RBP4.46□□□□□ -1.7
CHMP3-206ENST00000466032 WNK1Q9H4A3 2382 aa4.46□□□□□ -1.7
CHMP3-206ENST00000466032 TRAV8-1A0A0A6YYK1 113 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 A0A1B0GW15 77 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 C19orf71A6NCJ1 209 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 IZUMO1RA6ND01 250 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 A8MZ25 164 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 PRAC2D3DTV9 90 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 F2Z2F3 143 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 NUDT3O95989 172 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 IGLV2-8P01709 118 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 EDN2P20800 178 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 HLA-DMBP28068 263 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 APOC4P55056 127 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 FOXA3P55318 350 aaPredicted RBP4.45□□□□□ -1.7
CHMP3-206ENST00000466032 VAMP3Q15836 100 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 ODF3L2Q3SX64 289 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 IGFL4Q6B9Z1 124 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 TRPT1Q86TN4 253 aaKnown RBP4.45□□□□□ -1.7
CHMP3-206ENST00000466032 MRAP2Q96G30 205 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 SIGMAR1Q99720 223 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 LINC00467Q9BRT7 94 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 RPP21Q9H633 154 aaKnown RBP4.45□□□□□ -1.7
CHMP3-206ENST00000466032 SPANXCQ9NY87 97 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 PAM16Q9Y3D7 125 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 TRAPPC1Q9Y5R8 145 aa4.45□□□□□ -1.7
CHMP3-206ENST00000466032 STAB1Q9NY15 2570 aa4.44□□□□□ -1.7
CHMP3-206ENST00000466032 C7orf71A4D174 169 aa4.44□□□□□ -1.7
CHMP3-206ENST00000466032 A6NDN8 102 aa4.44□□□□□ -1.7
CHMP3-206ENST00000466032 K7EN84 100 aa4.44□□□□□ -1.7
CHMP3-206ENST00000466032 TAX1BP3O14907 124 aa4.44□□□□□ -1.7
CHMP3-206ENST00000466032 INSP01308 110 aa4.44□□□□□ -1.7
CHMP3-206ENST00000466032 MED14OSP0DP75 135 aa4.44□□□□□ -1.7
CHMP3-206ENST00000466032 IGLL1P15814 213 aa4.44□□□□□ -1.7
CHMP3-206ENST00000466032 ERCC8Q13216 396 aa4.44□□□□□ -1.7
CHMP3-206ENST00000466032 TDRG1Q3Y452 100 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms