RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 FAM159AQ6UWV7 190 aa13.79□□□□□ -0.2
SYNE4-204ENST00000465425 TOMM6Q96B49 74 aa13.79□□□□□ -0.2
SYNE4-204ENST00000465425 JMJD8Q96S16 334 aa13.79□□□□□ -0.2
SYNE4-204ENST00000465425 F8VRH5 84 aa13.79□□□□□ -0.2
SYNE4-204ENST00000465425 SMIM13P0DJ93 91 aa13.79□□□□□ -0.2
SYNE4-204ENST00000465425 GATA3P23771 443 aa13.79□□□□□ -0.2
SYNE4-204ENST00000465425 RNF151Q2KHN1 245 aa13.79□□□□□ -0.2
SYNE4-204ENST00000465425 EDN2P20800 178 aa13.78□□□□□ -0.2
SYNE4-204ENST00000465425 CDKN1BP46527 198 aa13.78□□□□□ -0.2
SYNE4-204ENST00000465425 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.78□□□□□ -0.22e-6■■■■■ 27.4
SYNE4-204ENST00000465425 CELSR2Q9HCU4 2923 aa13.78□□□□□ -0.2
SYNE4-204ENST00000465425 FXYD2P54710 66 aa13.78□□□□□ -0.2
SYNE4-204ENST00000465425 OCIAD2Q56VL3 154 aa13.78□□□□□ -0.2
SYNE4-204ENST00000465425 KLLNB2CW77 178 aa13.77□□□□□ -0.21
SYNE4-204ENST00000465425 CHTOPQ9Y3Y2 248 aaKnown RBP13.77□□□□□ -0.21
SYNE4-204ENST00000465425 CFAP46Q8IYW2 2715 aa13.77□□□□□ -0.21
SYNE4-204ENST00000465425 K7EP34 96 aa13.76□□□□□ -0.21
SYNE4-204ENST00000465425 PSMB8P28062 276 aa13.76□□□□□ -0.21
SYNE4-204ENST00000465425 C2orf66Q6UXQ4 117 aa13.76□□□□□ -0.21
SYNE4-204ENST00000465425 DCANP1Q8TF63 244 aa13.76□□□□□ -0.21
SYNE4-204ENST00000465425 DSCR9P59020 149 aa13.76□□□□□ -0.21
SYNE4-204ENST00000465425 UFSP1Q6NVU6 142 aa13.76□□□□□ -0.21
SYNE4-204ENST00000465425 A0A1W2PPM0 123 aa13.75□□□□□ -0.21
SYNE4-204ENST00000465425 IGHV4-59P01825 116 aa13.75□□□□□ -0.21
SYNE4-204ENST00000465425 WFDC12Q8WWY7 111 aa13.75□□□□□ -0.21
SYNE4-204ENST00000465425 CSTL1Q9H114 145 aa13.75□□□□□ -0.21
SYNE4-204ENST00000465425 ZNF580Q9UK33 172 aa13.75□□□□□ -0.21
SYNE4-204ENST00000465425 PCP4P48539 62 aa13.75□□□□□ -0.21
SYNE4-204ENST00000465425 NXPH4O95158 308 aa13.74□□□□□ -0.21
SYNE4-204ENST00000465425 FABP2P12104 132 aa13.74□□□□□ -0.21
SYNE4-204ENST00000465425 DEFB112Q30KQ8 113 aa13.74□□□□□ -0.21
SYNE4-204ENST00000465425 CEND1Q8N111 149 aa13.74□□□□□ -0.21
SYNE4-204ENST00000465425 NEXN-AS1Q8NBZ9 246 aa13.74□□□□□ -0.21
SYNE4-204ENST00000465425 DOPEY1Q5JWR5 2465 aa13.74□□□□□ -0.21
SYNE4-204ENST00000465425 CD7P09564 240 aa13.74□□□□□ -0.21
SYNE4-204ENST00000465425 MAPKAPK5-AS1Q8N8E1 139 aa13.74□□□□□ -0.21
SYNE4-204ENST00000465425 NRGNQ92686 78 aa13.74□□□□□ -0.21
SYNE4-204ENST00000465425 SPCS1Q9Y6A9 102 aa13.74□□□□□ -0.21
SYNE4-204ENST00000465425 TRAV12-3A0A0B4J271 114 aa13.73□□□□□ -0.21
SYNE4-204ENST00000465425 OR11H12B2RN74 326 aa13.73□□□□□ -0.21
SYNE4-204ENST00000465425 RNF223E7ERA6 249 aa13.73□□□□□ -0.21
SYNE4-204ENST00000465425 SAMD5Q5TGI4 173 aa13.73□□□□□ -0.21
SYNE4-204ENST00000465425 OR11H1Q8NG94 326 aa13.73□□□□□ -0.21
SYNE4-204ENST00000465425 OR11H2Q8NH07 326 aa13.73□□□□□ -0.21
SYNE4-204ENST00000465425 K7ERU9 68 aa13.73□□□□□ -0.21
SYNE4-204ENST00000465425 ZNF688P0C7X2 276 aa13.73□□□□□ -0.21
SYNE4-204ENST00000465425 TM2D2Q9BX73 214 aa13.73□□□□□ -0.21
SYNE4-204ENST00000465425 NHP2Q9NX24 153 aaKnown RBP13.73□□□□□ -0.21
SYNE4-204ENST00000465425 SNRPD3P62318 126 aaKnown RBP13.72□□□□□ -0.21
SYNE4-204ENST00000465425 LINC01356Q8N9X3 169 aa13.72□□□□□ -0.21
SYNE4-204ENST00000465425 BAALCQ8WXS3 180 aa13.72□□□□□ -0.21
SYNE4-204ENST00000465425 FLNCQ14315 2725 aa13.72□□□□□ -0.21
SYNE4-204ENST00000465425 C10orf99Q6UWK7 81 aa13.72□□□□□ -0.21
SYNE4-204ENST00000465425 POM121L12Q8N7R1 296 aa13.72□□□□□ -0.21
SYNE4-204ENST00000465425 OR5A1Q8NGJ0 315 aa13.72□□□□□ -0.21
SYNE4-204ENST00000465425 CSPG4Q6UVK1 2322 aa13.71□□□□□ -0.21
SYNE4-204ENST00000465425 F5H697 171 aa13.71□□□□□ -0.21
SYNE4-204ENST00000465425 HIST1H4GQ99525 98 aa13.71□□□□□ -0.21
SYNE4-204ENST00000465425 VPS25Q9BRG1 176 aa13.71□□□□□ -0.21
SYNE4-204ENST00000465425 KIF25-AS1Q9Y6Z4 181 aa13.71□□□□□ -0.21
SYNE4-204ENST00000465425 K7ERJ3 54 aa13.7□□□□□ -0.22
SYNE4-204ENST00000465425 TAL2Q16559 108 aa13.7□□□□□ -0.22
SYNE4-204ENST00000465425 NEGR1Q7Z3B1 354 aa13.7□□□□□ -0.22
SYNE4-204ENST00000465425 CYSLTR1Q9Y271 337 aa13.7□□□□□ -0.22
SYNE4-204ENST00000465425 CRYBG3Q68DQ2 2970 aa13.7□□□□□ -0.22
SYNE4-204ENST00000465425 A0A087WWL8 130 aa13.7□□□□□ -0.22
SYNE4-204ENST00000465425 JPT2Q9H910 190 aa13.7□□□□□ -0.22
SYNE4-204ENST00000465425 IGHV4OR15-8A0A075B7B6 117 aa13.69□□□□□ -0.22
SYNE4-204ENST00000465425 A0A087WW49 117 aa13.69□□□□□ -0.22
SYNE4-204ENST00000465425 IGKV3-20P01619 116 aa13.69□□□□□ -0.22
SYNE4-204ENST00000465425 LINC00315P59091 139 aa13.69□□□□□ -0.22
SYNE4-204ENST00000465425 USP9XQ93008 2570 aaPredicted RBP13.69□□□□□ -0.22
SYNE4-204ENST00000465425 TMEM89A2RUT3 159 aa13.69□□□□□ -0.22
SYNE4-204ENST00000465425 PRSS29PA6NIE9 313 aa13.69□□□□□ -0.22
SYNE4-204ENST00000465425 KIR2DL4Q99706 377 aa13.69□□□□□ -0.22
SYNE4-204ENST00000465425 MYMXA0A1B0GTQ4 84 aa13.68□□□□□ -0.22
SYNE4-204ENST00000465425 TGFAP01135 160 aa13.68□□□□□ -0.22
SYNE4-204ENST00000465425 SUMO4Q6EEV6 95 aa13.68□□□□□ -0.22
SYNE4-204ENST00000465425 PIEZO1Q92508 2521 aa13.68□□□□□ -0.22
SYNE4-204ENST00000465425 MUC4Q99102 2169 aa13.68□□□□□ -0.22
SYNE4-204ENST00000465425 RPL32P62910 135 aaKnown RBP13.68□□□□□ -0.22
SYNE4-204ENST00000465425 ODF3Q96PU9 254 aa13.68□□□□□ -0.22
SYNE4-204ENST00000465425 TRAV12-2A0A075B6T6 113 aa13.67□□□□□ -0.22
SYNE4-204ENST00000465425 A0A0J9YX75 114 aa13.67□□□□□ -0.22
SYNE4-204ENST00000465425 LINC01549A6NIU2 74 aa13.67□□□□□ -0.22
SYNE4-204ENST00000465425 DUSP14O95147 198 aaKnown RBP13.67□□□□□ -0.22
SYNE4-204ENST00000465425 FAM74A4Q5TZK3 123 aa13.67□□□□□ -0.22
SYNE4-204ENST00000465425 TP53TG1Q9Y2A0 90 aa13.67□□□□□ -0.22
SYNE4-204ENST00000465425 CSMD2Q7Z408 3487 aa13.67□□□□□ -0.22
SYNE4-204ENST00000465425 SYNJ2BPP57105 145 aa13.67□□□□□ -0.22
SYNE4-204ENST00000465425 SCGB2A2Q13296 93 aa13.67□□□□□ -0.22
SYNE4-204ENST00000465425 J3QLI3 93 aa13.66□□□□□ -0.22
SYNE4-204ENST00000465425 VCYO14598 125 aa13.66□□□□□ -0.22
SYNE4-204ENST00000465425 SYT8Q8NBV8 401 aa13.66□□□□□ -0.22
SYNE4-204ENST00000465425 PHLDA1Q8WV24 401 aaPredicted RBP13.66□□□□□ -0.22
SYNE4-204ENST00000465425 E9PLD3 99 aa13.65□□□□□ -0.22
SYNE4-204ENST00000465425 POLR2KP53803 58 aaKnown RBP13.65□□□□□ -0.22
SYNE4-204ENST00000465425 ZFP2Q6ZN57 461 aa13.65□□□□□ -0.22
SYNE4-204ENST00000465425 MAPK1IP1LQ8NDC0 245 aa13.65□□□□□ -0.22
SYNE4-204ENST00000465425 IGSF10Q6WRI0 2623 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms