RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CDPF1Q6NVV7 123 aa12.44□□□□□ -0.42
EXOSC3-203ENST00000465229 TRPT1Q86TN4 253 aaKnown RBP12.44□□□□□ -0.42
EXOSC3-203ENST00000465229 TPPP3Q9BW30 176 aa12.44□□□□□ -0.42
EXOSC3-203ENST00000465229 Q6ZWC4 215 aa12.43□□□□□ -0.42
EXOSC3-203ENST00000465229 IGKV3D-20A0A0C4DH25 116 aa12.42□□□□□ -0.42
EXOSC3-203ENST00000465229 RBMY1BA6NDE4 496 aaKnown RBP12.42□□□□□ -0.42
EXOSC3-203ENST00000465229 RBMY1EA6NEQ0 496 aaKnown RBP12.42□□□□□ -0.42
EXOSC3-203ENST00000465229 A8MTW9 85 aa12.42□□□□□ -0.42
EXOSC3-203ENST00000465229 K7EIL1 84 aa12.42□□□□□ -0.42
EXOSC3-203ENST00000465229 RBMY1DP0C7P1 496 aaKnown RBP12.42□□□□□ -0.42
EXOSC3-203ENST00000465229 AMTP48728 403 aa12.42□□□□□ -0.42
EXOSC3-203ENST00000465229 FAM104BQ5XKR9 115 aa12.42□□□□□ -0.42
EXOSC3-203ENST00000465229 ZFAND2AQ8N6M9 145 aa12.42□□□□□ -0.42
EXOSC3-203ENST00000465229 CHCHD1Q96BP2 118 aaKnown RBP12.42□□□□□ -0.42
EXOSC3-203ENST00000465229 CLUHP3Q96NS8 147 aa12.42□□□□□ -0.42
EXOSC3-203ENST00000465229 RPL35AP18077 110 aaKnown RBP12.41□□□□□ -0.42
EXOSC3-203ENST00000465229 AMTNQ6UX39 209 aa12.41□□□□□ -0.42
EXOSC3-203ENST00000465229 C11orf21Q9P2W6 132 aa12.41□□□□□ -0.42
EXOSC3-203ENST00000465229 U3KQK5 164 aa12.41□□□□□ -0.42
EXOSC3-203ENST00000465229 A8MZ25 164 aa12.4□□□□□ -0.42
EXOSC3-203ENST00000465229 HSBP1O75506 76 aa12.4□□□□□ -0.42
EXOSC3-203ENST00000465229 NIT1Q86X76 327 aa12.4□□□□□ -0.42
EXOSC3-203ENST00000465229 TMEM191AQ9H0A3 160 aa12.4□□□□□ -0.42
EXOSC3-203ENST00000465229 TRAV21A0A0B4J279 112 aa12.4□□□□□ -0.42
EXOSC3-203ENST00000465229 NAGKQ9UJ70 344 aa12.4□□□□□ -0.42
EXOSC3-203ENST00000465229 SCGB1D1O95968 90 aa12.39□□□□□ -0.43
EXOSC3-203ENST00000465229 OR5AL1P0C617 328 aa12.39□□□□□ -0.43
EXOSC3-203ENST00000465229 PMCHP20382 165 aa12.39□□□□□ -0.43
EXOSC3-203ENST00000465229 NTF3P20783 257 aa12.39□□□□□ -0.43
EXOSC3-203ENST00000465229 TWIST1Q15672 202 aa12.39□□□□□ -0.43
EXOSC3-203ENST00000465229 ODF3Q96PU9 254 aa12.39□□□□□ -0.43
EXOSC3-203ENST00000465229 MEGF8Q7Z7M0 2845 aa12.39□□□□□ -0.43
EXOSC3-203ENST00000465229 NBEAL2Q6ZNJ1 2754 aa12.39□□□□□ -0.43
EXOSC3-203ENST00000465229 SNAI2O43623 268 aa12.38□□□□□ -0.43
EXOSC3-203ENST00000465229 RAB4AP20338 218 aa12.38□□□□□ -0.43
EXOSC3-203ENST00000465229 PKIAP61925 76 aa12.38□□□□□ -0.43
EXOSC3-203ENST00000465229 PRR9Q5T870 116 aa12.38□□□□□ -0.43
EXOSC3-203ENST00000465229 URB1-AS1Q96HZ7 61 aa12.38□□□□□ -0.43
EXOSC3-203ENST00000465229 IGHV4-4A0A075B6R2 117 aa12.37□□□□□ -0.43
EXOSC3-203ENST00000465229 GIG44P09565 113 aaPredicted RBP12.37□□□□□ -0.43
EXOSC3-203ENST00000465229 FXYD7P58549 80 aa12.37□□□□□ -0.43
EXOSC3-203ENST00000465229 RNASEKQ6P5S7 137 aaKnown RBP12.37□□□□□ -0.43
EXOSC3-203ENST00000465229 M0R2Z0 102 aa12.37□□□□□ -0.43
EXOSC3-203ENST00000465229 LINC00614P0C842 121 aa12.37□□□□□ -0.43
EXOSC3-203ENST00000465229 CACNG7P62955 275 aa12.37□□□□□ -0.43
EXOSC3-203ENST00000465229 KIR3DS1Q14943 382 aa12.37□□□□□ -0.43
EXOSC3-203ENST00000465229 SPINK13Q1W4C9 94 aa12.37□□□□□ -0.43
EXOSC3-203ENST00000465229 ORMDL3Q8N138 153 aa12.37□□□□□ -0.43
EXOSC3-203ENST00000465229 KLLNB2CW77 178 aa12.36□□□□□ -0.43
EXOSC3-203ENST00000465229 MED14OSP0DP75 135 aa12.36□□□□□ -0.43
EXOSC3-203ENST00000465229 NUTF2P61970 127 aaKnown RBP12.36□□□□□ -0.43
EXOSC3-203ENST00000465229 DEFB121Q5J5C9 76 aa12.36□□□□□ -0.43
EXOSC3-203ENST00000465229 FAM19A2Q8N3H0 131 aa12.36□□□□□ -0.43
EXOSC3-203ENST00000465229 CSTL1Q9H114 145 aa12.36□□□□□ -0.43
EXOSC3-203ENST00000465229 TSTD3H0UI37 97 aa12.35□□□□□ -0.43
EXOSC3-203ENST00000465229 PPBPP02775 128 aa12.35□□□□□ -0.43
EXOSC3-203ENST00000465229 MRPL51Q4U2R6 128 aaKnown RBP12.35□□□□□ -0.43
EXOSC3-203ENST00000465229 MORN3Q6PF18 240 aaPredicted RBP12.35□□□□□ -0.43
EXOSC3-203ENST00000465229 AMN1Q8IY45 258 aa12.35□□□□□ -0.43
EXOSC3-203ENST00000465229 KIR2DL5BA0A0G2JN68 375 aa12.34□□□□□ -0.43
EXOSC3-203ENST00000465229 KIR2DL5BA0A0G2JPC4 375 aa12.34□□□□□ -0.43
EXOSC3-203ENST00000465229 J3KRW8 73 aa12.34□□□□□ -0.43
EXOSC3-203ENST00000465229 CRXO43186 299 aaPredicted RBP12.34□□□□□ -0.43
EXOSC3-203ENST00000465229 TSPOP30536 169 aa12.34□□□□□ -0.43
EXOSC3-203ENST00000465229 LEPP41159 167 aa12.34□□□□□ -0.43
EXOSC3-203ENST00000465229 CDKN1BP46527 198 aa12.34□□□□□ -0.43
EXOSC3-203ENST00000465229 KIR2DL5AQ8N109 375 aa12.34□□□□□ -0.43
EXOSC3-203ENST00000465229 KIR2DL5BQ8NHK3 375 aa12.34□□□□□ -0.43
EXOSC3-203ENST00000465229 XCL2Q9UBD3 114 aa12.34□□□□□ -0.43
EXOSC3-203ENST00000465229 LAMTOR2Q9Y2Q5 125 aa12.34□□□□□ -0.43
EXOSC3-203ENST00000465229 TRAV12-2A0A075B6T6 113 aa12.33□□□□□ -0.43
EXOSC3-203ENST00000465229 D6R8Y8 96 aa12.33□□□□□ -0.43
EXOSC3-203ENST00000465229 TEX43Q6ZNM6 134 aa12.33□□□□□ -0.43
EXOSC3-203ENST00000465229 PRELID3AQ96N28 172 aa12.33□□□□□ -0.43
EXOSC3-203ENST00000465229 MUC21A0A0G2JKD1 596 aa12.33□□□□□ -0.44
EXOSC3-203ENST00000465229 MUC21A0A140T8X8 626 aa12.33□□□□□ -0.44
EXOSC3-203ENST00000465229 APOC4P55056 127 aa12.33□□□□□ -0.44
EXOSC3-203ENST00000465229 KRTDAPP60985 99 aa12.33□□□□□ -0.44
EXOSC3-203ENST00000465229 DEFA6Q01524 100 aa12.33□□□□□ -0.44
EXOSC3-203ENST00000465229 MUC21Q5SSG8 566 aa12.33□□□□□ -0.44
EXOSC3-203ENST00000465229 SMIM15Q7Z3B0 74 aa12.33□□□□□ -0.44
EXOSC3-203ENST00000465229 ZNF664Q8N3J9 261 aa12.33□□□□□ -0.44
EXOSC3-203ENST00000465229 RNF185Q96GF1 192 aa12.33□□□□□ -0.44
EXOSC3-203ENST00000465229 MSRB1Q9NZV6 116 aa12.33□□□□□ -0.44
EXOSC3-203ENST00000465229 LINC00587B1AMM8 73 aa12.32□□□□□ -0.44
EXOSC3-203ENST00000465229 C3orf79P0CE67 100 aa12.32□□□□□ -0.44
EXOSC3-203ENST00000465229 RNASE4P34096 147 aaKnown RBP12.32□□□□□ -0.44
EXOSC3-203ENST00000465229 Q8N976 141 aa12.32□□□□□ -0.44
EXOSC3-203ENST00000465229 MRAPQ8TCY5 172 aa12.32□□□□□ -0.44
EXOSC3-203ENST00000465229 IGHV1-24A0A0C4DH33 117 aa12.31□□□□□ -0.44
EXOSC3-203ENST00000465229 CKS2P33552 79 aa12.31□□□□□ -0.44
EXOSC3-203ENST00000465229 Q6ZQT7 251 aa12.31□□□□□ -0.44
EXOSC3-203ENST00000465229 CSNK1G2-AS1Q8NCQ2 148 aa12.31□□□□□ -0.44
EXOSC3-203ENST00000465229 OR10AG1Q8NH19 301 aa12.31□□□□□ -0.44
EXOSC3-203ENST00000465229 SCRT2Q9NQ03 307 aa12.31□□□□□ -0.44
EXOSC3-203ENST00000465229 AP5S1Q9NUS5 200 aa12.31□□□□□ -0.44
EXOSC3-203ENST00000465229 ASIPP42127 132 aa12.3□□□□□ -0.44
EXOSC3-203ENST00000465229 SSTP61278 116 aa12.3□□□□□ -0.44
EXOSC3-203ENST00000465229 C1QTNF4Q9BXJ3 329 aa12.3□□□□□ -0.44
EXOSC3-203ENST00000465229 C7orf71A4D174 169 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms