RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 C11orf21Q9P2W6 132 aa10.44□□□□□ -0.74
HOXB3-204ENST00000465120 RS1O15537 224 aa10.43□□□□□ -0.74
HOXB3-204ENST00000465120 CIDEAO60543 219 aa10.43□□□□□ -0.74
HOXB3-204ENST00000465120 RHOHQ15669 191 aa10.43□□□□□ -0.74
HOXB3-204ENST00000465120 LGALSLQ3ZCW2 172 aaPredicted RBP10.43□□□□□ -0.74
HOXB3-204ENST00000465120 SAPCD1Q5SSQ6 148 aa10.43□□□□□ -0.74
HOXB3-204ENST00000465120 DPPA3Q6W0C5 159 aa10.43□□□□□ -0.74
HOXB3-204ENST00000465120 SUN5Q8TC36 379 aa10.43□□□□□ -0.74
HOXB3-204ENST00000465120 BORCS7-ASMTA0A0B4J1R7 106 aa10.42□□□□□ -0.74
HOXB3-204ENST00000465120 TRBV6-4A0A1B0GX49 114 aa10.42□□□□□ -0.74
HOXB3-204ENST00000465120 KANTRA0A1W2PQU2 76 aa10.42□□□□□ -0.74
HOXB3-204ENST00000465120 PGPEP1LA6NFU8 196 aa10.42□□□□□ -0.74
HOXB3-204ENST00000465120 GGTLC3B5MD39 225 aa10.42□□□□□ -0.74
HOXB3-204ENST00000465120 IFNA7P01567 189 aa10.42□□□□□ -0.74
HOXB3-204ENST00000465120 S100A4P26447 101 aaKnown RBP10.42□□□□□ -0.74
HOXB3-204ENST00000465120 TIRAPP58753 221 aa10.42□□□□□ -0.74
HOXB3-204ENST00000465120 EIF5AP63241 154 aaKnown RBP10.42□□□□□ -0.74
HOXB3-204ENST00000465120 TMUB2Q71RG4 321 aa10.42□□□□□ -0.74
HOXB3-204ENST00000465120 KCNRGQ8N5I3 272 aa10.42□□□□□ -0.74
HOXB3-204ENST00000465120 Q9HAA7 133 aa10.42□□□□□ -0.74
HOXB3-204ENST00000465120 TRAV34A0A0B4J273 112 aa10.41□□□□□ -0.74
HOXB3-204ENST00000465120 IGLV2-11P01706 119 aa10.41□□□□□ -0.74
HOXB3-204ENST00000465120 IGHV3-30P01768 117 aa10.41□□□□□ -0.74
HOXB3-204ENST00000465120 IGHV3-33P01772 117 aa10.41□□□□□ -0.74
HOXB3-204ENST00000465120 IGHV3-30-3P0DP02 117 aa10.41□□□□□ -0.74
HOXB3-204ENST00000465120 IGHV3-30-5P0DP03 117 aa10.41□□□□□ -0.74
HOXB3-204ENST00000465120 GCSHP23434 173 aa10.41□□□□□ -0.74
HOXB3-204ENST00000465120 ZNF506Q5JVG8 444 aa10.41□□□□□ -0.74
HOXB3-204ENST00000465120 C9orf85Q96MD7 179 aa10.41□□□□□ -0.74
HOXB3-204ENST00000465120 KRTAP10-1P60331 282 aa10.4□□□□□ -0.74
HOXB3-204ENST00000465120 UBE2G2P60604 165 aa10.4□□□□□ -0.74
HOXB3-204ENST00000465120 LINC01556Q5JQF7 62 aa10.4□□□□□ -0.74
HOXB3-204ENST00000465120 RPL7L1Q6DKI1 246 aaKnown RBP10.4□□□□□ -0.74
HOXB3-204ENST00000465120 ATP6V0E2Q8NHE4 81 aa10.4□□□□□ -0.74
HOXB3-204ENST00000465120 LINC00479Q96M42 142 aa10.4□□□□□ -0.74
HOXB3-204ENST00000465120 BOLA1Q9Y3E2 137 aa10.4□□□□□ -0.74
HOXB3-204ENST00000465120 A0A1W2PRE2 83 aa10.39□□□□□ -0.75
HOXB3-204ENST00000465120 IBA57-AS1B1ANH7 110 aa10.39□□□□□ -0.75
HOXB3-204ENST00000465120 MGST1P10620 155 aaKnown RBP10.39□□□□□ -0.75
HOXB3-204ENST00000465120 RNASE3P12724 160 aaKnown RBP10.39□□□□□ -0.75
HOXB3-204ENST00000465120 XGP55808 180 aa10.39□□□□□ -0.75
HOXB3-204ENST00000465120 LELP1Q5T871 98 aa10.39□□□□□ -0.75
HOXB3-204ENST00000465120 SLC51BQ86UW2 128 aa10.39□□□□□ -0.75
HOXB3-204ENST00000465120 FRZBQ92765 325 aa10.39□□□□□ -0.75
HOXB3-204ENST00000465120 GTSF1LQ9H1H1 148 aa10.39□□□□□ -0.75
HOXB3-204ENST00000465120 IGLV5-52A0A0A0MRZ9 124 aa10.38□□□□□ -0.75
HOXB3-204ENST00000465120 CTXND1A0A1B0GTU2 59 aa10.38□□□□□ -0.75
HOXB3-204ENST00000465120 RNF222A6NCQ9 220 aa10.38□□□□□ -0.75
HOXB3-204ENST00000465120 FABP5P3A8MUU1 101 aa10.38□□□□□ -0.75
HOXB3-204ENST00000465120 BCL2L11O43521 198 aa10.38□□□□□ -0.75
HOXB3-204ENST00000465120 ASIPP42127 132 aa10.38□□□□□ -0.75
HOXB3-204ENST00000465120 PTH2Q96A98 100 aa10.38□□□□□ -0.75
HOXB3-204ENST00000465120 ARL2-SNX15V9GYD0 113 aa10.38□□□□□ -0.75
HOXB3-204ENST00000465120 GAGE12JA6NER3 117 aa10.37□□□□□ -0.75
HOXB3-204ENST00000465120 A8MWV9 139 aa10.37□□□□□ -0.75
HOXB3-204ENST00000465120 INAFM2P0DMQ5 153 aa10.37□□□□□ -0.75
HOXB3-204ENST00000465120 FGF8P55075 233 aaPredicted RBP10.37□□□□□ -0.75
HOXB3-204ENST00000465120 GAGE1Q13065 139 aa10.37□□□□□ -0.75
HOXB3-204ENST00000465120 GAGE4Q13068 117 aa10.37□□□□□ -0.75
HOXB3-204ENST00000465120 GAGE5Q13069 117 aa10.37□□□□□ -0.75
HOXB3-204ENST00000465120 GAGE13Q4V321 117 aa10.37□□□□□ -0.75
HOXB3-204ENST00000465120 AKR1C8PQ5T2L2 129 aa10.37□□□□□ -0.75
HOXB3-204ENST00000465120 IGKV3D-20A0A0C4DH25 116 aa10.36□□□□□ -0.75
HOXB3-204ENST00000465120 B4DEV8 164 aa10.36□□□□□ -0.75
HOXB3-204ENST00000465120 PEX7O00628 323 aa10.36□□□□□ -0.75
HOXB3-204ENST00000465120 SMR3BP02814 79 aaPredicted RBP10.36□□□□□ -0.75
HOXB3-204ENST00000465120 ZNF726P1Q15940 193 aa10.36□□□□□ -0.75
HOXB3-204ENST00000465120 EIF5AL1Q6IS14 154 aaKnown RBP10.36□□□□□ -0.75
HOXB3-204ENST00000465120 PARLQ9H300 379 aa10.36□□□□□ -0.75
HOXB3-204ENST00000465120 TPT1P13693 172 aaKnown RBP10.35□□□□□ -0.75
HOXB3-204ENST00000465120 Q5VSD8 79 aa10.35□□□□□ -0.75
HOXB3-204ENST00000465120 ZFP2Q6ZN57 461 aa10.35□□□□□ -0.75
HOXB3-204ENST00000465120 Q6ZSN1 163 aa10.35□□□□□ -0.75
HOXB3-204ENST00000465120 ZNF471Q9BX82 626 aaPredicted RBP10.35□□□□□ -0.75
HOXB3-204ENST00000465120 NKX6-2Q9C056 277 aaPredicted RBP10.35□□□□□ -0.75
HOXB3-204ENST00000465120 LRCOL1A6NCL2 159 aa10.34□□□□□ -0.75
HOXB3-204ENST00000465120 H3BVH4 76 aa10.34□□□□□ -0.75
HOXB3-204ENST00000465120 M0R036 132 aa10.34□□□□□ -0.75
HOXB3-204ENST00000465120 UBE2G1P62253 170 aa10.34□□□□□ -0.75
HOXB3-204ENST00000465120 HAMPP81172 84 aa10.34□□□□□ -0.75
HOXB3-204ENST00000465120 Q86TA4 180 aa10.34□□□□□ -0.75
HOXB3-204ENST00000465120 SYT8Q8NBV8 401 aa10.34□□□□□ -0.75
HOXB3-204ENST00000465120 NTN5Q8WTR8 489 aaPredicted RBP10.34□□□□□ -0.75
HOXB3-204ENST00000465120 HIST1H2BAQ96A08 127 aa10.34□□□□□ -0.75
HOXB3-204ENST00000465120 TM2D2Q9BX73 214 aa10.34□□□□□ -0.75
HOXB3-204ENST00000465120 JPT2Q9H910 190 aa10.34□□□□□ -0.75
HOXB3-204ENST00000465120 GRIFINA4D1Z8 144 aa10.33□□□□□ -0.76
HOXB3-204ENST00000465120 FAM74A7A6NL05 159 aa10.33□□□□□ -0.76
HOXB3-204ENST00000465120 TEX261Q6UWH6 196 aa10.33□□□□□ -0.76
HOXB3-204ENST00000465120 Q8N814 137 aa10.33□□□□□ -0.76
HOXB3-204ENST00000465120 STOML3Q8TAV4 291 aa10.33□□□□□ -0.76
HOXB3-204ENST00000465120 IL36BQ9NZH7 164 aa10.33□□□□□ -0.76
HOXB3-204ENST00000465120 MAP1LC3B2A6NCE7 125 aa10.32□□□□□ -0.76
HOXB3-204ENST00000465120 FAM229AH3BQW9 127 aa10.32□□□□□ -0.76
HOXB3-204ENST00000465120 ARMS2P0C7Q2 107 aa10.32□□□□□ -0.76
HOXB3-204ENST00000465120 RAB14P61106 215 aa10.32□□□□□ -0.76
HOXB3-204ENST00000465120 PIK3CD-AS1Q5SR53 167 aa10.32□□□□□ -0.76
HOXB3-204ENST00000465120 FAM74A4Q5TZK3 123 aa10.32□□□□□ -0.76
HOXB3-204ENST00000465120 DMRTA1Q5VZB9 504 aa10.32□□□□□ -0.76
HOXB3-204ENST00000465120 CST9LP1Q5W188 147 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms