RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 GRIFINA4D1Z8 144 aa8.38□□□□□ -1.07
XRN1-204ENST00000465074 SH2D1AO60880 128 aa8.38□□□□□ -1.07
XRN1-204ENST00000465074 ASIPP42127 132 aa8.38□□□□□ -1.07
XRN1-204ENST00000465074 LGALSLQ3ZCW2 172 aaPredicted RBP8.38□□□□□ -1.07
XRN1-204ENST00000465074 ZNF506Q5JVG8 444 aa8.38□□□□□ -1.07
XRN1-204ENST00000465074 CFAP126Q5VTH2 177 aa8.38□□□□□ -1.07
XRN1-204ENST00000465074 MBD3L1Q8WWY6 194 aa8.38□□□□□ -1.07
XRN1-204ENST00000465074 KRTAP1-5Q9BYS1 174 aa8.38□□□□□ -1.07
XRN1-204ENST00000465074 ZFP30Q9Y2G7 519 aa8.38□□□□□ -1.07
XRN1-204ENST00000465074 H3BVH4 76 aa8.37□□□□□ -1.07
XRN1-204ENST00000465074 RNASE3P12724 160 aaKnown RBP8.37□□□□□ -1.07
XRN1-204ENST00000465074 FAM162BQ5T6X4 162 aa8.37□□□□□ -1.07
XRN1-204ENST00000465074 DPPA3Q6W0C5 159 aa8.37□□□□□ -1.07
XRN1-204ENST00000465074 C9orf85Q96MD7 179 aa8.37□□□□□ -1.07
XRN1-204ENST00000465074 TXNDC17Q9BRA2 123 aa8.37□□□□□ -1.07
XRN1-204ENST00000465074 HECTD4Q9Y4D8 3996 aa8.37□□□□□ -1.07
XRN1-204ENST00000465074 SCO2A0A1W2PP80 73 aa8.36□□□□□ -1.07
XRN1-204ENST00000465074 J3QL48 77 aa8.36□□□□□ -1.07
XRN1-204ENST00000465074 RS1O15537 224 aa8.36□□□□□ -1.07
XRN1-204ENST00000465074 CRIP1P50238 77 aa8.36□□□□□ -1.07
XRN1-204ENST00000465074 SLC25A29Q8N8R3 303 aa8.36□□□□□ -1.07
XRN1-204ENST00000465074 GNG13Q9P2W3 67 aa8.36□□□□□ -1.07
XRN1-204ENST00000465074 KRBOX1C9JBD0 128 aa8.35□□□□□ -1.07
XRN1-204ENST00000465074 GATA1P15976 413 aaPredicted RBP8.35□□□□□ -1.07
XRN1-204ENST00000465074 CCL20P78556 96 aa8.35□□□□□ -1.07
XRN1-204ENST00000465074 EIF5AL1Q6IS14 154 aaKnown RBP8.35□□□□□ -1.07
XRN1-204ENST00000465074 WFDC10BQ8IUB3 73 aa8.35□□□□□ -1.07
XRN1-204ENST00000465074 TCEAL7Q9BRU2 100 aa8.35□□□□□ -1.07
XRN1-204ENST00000465074 PRADC1Q9BSG0 188 aa8.35□□□□□ -1.07
XRN1-204ENST00000465074 DNAH17Q9UFH2 4485 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 LTAP01374 205 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 ARMS2P0C7Q2 107 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 LINC00315P59091 139 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 PRR27Q6MZM9 219 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 Q6ZNX1 250 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 AKAP14Q86UN6 197 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 ZNF575Q86XF7 245 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 BAGE2Q86Y30 109 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 TCTE3Q8IZS6 198 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 SYT8Q8NBV8 401 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 JPT2Q9H910 190 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 PHLDA3Q9Y5J5 127 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 TNFRSF18Q9Y5U5 241 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 LY96Q9Y6Y9 160 aa8.34□□□□□ -1.07
XRN1-204ENST00000465074 FAT2Q9NYQ8 4349 aa8.33□□□□□ -1.08
XRN1-204ENST00000465074 PKD1P98161 4303 aa8.33□□□□□ -1.08
XRN1-204ENST00000465074 TRAV9-2A0A087WT02 112 aa8.33□□□□□ -1.08
XRN1-204ENST00000465074 TRBV6-1A0A0K0K1D8 114 aa8.33□□□□□ -1.08
XRN1-204ENST00000465074 A0A1W2PPQ1 181 aa8.33□□□□□ -1.08
XRN1-204ENST00000465074 A8MWV9 139 aa8.33□□□□□ -1.08
XRN1-204ENST00000465074 TEX46H3BTG2 121 aa8.33□□□□□ -1.08
XRN1-204ENST00000465074 M0R381 172 aa8.33□□□□□ -1.08
XRN1-204ENST00000465074 S100A9P06702 114 aaKnown RBP8.33□□□□□ -1.08
XRN1-204ENST00000465074 SSTP61278 116 aa8.33□□□□□ -1.08
XRN1-204ENST00000465074 RHOHQ15669 191 aa8.33□□□□□ -1.08
XRN1-204ENST00000465074 ZNF674Q2M3X9 581 aa8.33□□□□□ -1.08
XRN1-204ENST00000465074 Q6ZSN1 163 aa8.33□□□□□ -1.08
XRN1-204ENST00000465074 IL36BQ9NZH7 164 aa8.33□□□□□ -1.08
XRN1-204ENST00000465074 TRBV6-4A0A1B0GX49 114 aa8.32□□□□□ -1.08
XRN1-204ENST00000465074 CIDEAO60543 219 aa8.32□□□□□ -1.08
XRN1-204ENST00000465074 C1QBP02746 253 aa8.32□□□□□ -1.08
XRN1-204ENST00000465074 MGST1P10620 155 aaKnown RBP8.32□□□□□ -1.08
XRN1-204ENST00000465074 EVI2AP22794 236 aa8.32□□□□□ -1.08
XRN1-204ENST00000465074 RAB5CP51148 216 aa8.32□□□□□ -1.08
XRN1-204ENST00000465074 RPL19P84098 196 aaKnown RBP8.32□□□□□ -1.08
XRN1-204ENST00000465074 OR10J3Q5JRS4 329 aa8.32□□□□□ -1.08
XRN1-204ENST00000465074 FAM74A4Q5TZK3 123 aa8.32□□□□□ -1.08
XRN1-204ENST00000465074 SH2D6Q7Z4S9 175 aa8.32□□□□□ -1.08
XRN1-204ENST00000465074 PTH2Q96A98 100 aa8.32□□□□□ -1.08
XRN1-204ENST00000465074 SAMD10Q9BYL1 202 aa8.32□□□□□ -1.08
XRN1-204ENST00000465074 PARLQ9H300 379 aa8.32□□□□□ -1.08
XRN1-204ENST00000465074 MANBALQ9NQG1 85 aa8.32□□□□□ -1.08
XRN1-204ENST00000465074 A0A087WWL8 130 aa8.31□□□□□ -1.08
XRN1-204ENST00000465074 GAGE12JA6NER3 117 aa8.31□□□□□ -1.08
XRN1-204ENST00000465074 C16orf90A8MZG2 172 aa8.31□□□□□ -1.08
XRN1-204ENST00000465074 GAGE1Q13065 139 aa8.31□□□□□ -1.08
XRN1-204ENST00000465074 GAGE4Q13068 117 aa8.31□□□□□ -1.08
XRN1-204ENST00000465074 GAGE5Q13069 117 aa8.31□□□□□ -1.08
XRN1-204ENST00000465074 GAGE13Q4V321 117 aa8.31□□□□□ -1.08
XRN1-204ENST00000465074 DERL1Q9BUN8 251 aa8.31□□□□□ -1.08
XRN1-204ENST00000465074 TRAV8-6A0A0B4J262 113 aa8.3□□□□□ -1.08
XRN1-204ENST00000465074 MUC21A0A0G2JKD1 596 aa8.3□□□□□ -1.08
XRN1-204ENST00000465074 MUC21A0A140T8X8 626 aa8.3□□□□□ -1.08
XRN1-204ENST00000465074 CRYGDP07320 174 aa8.3□□□□□ -1.08
XRN1-204ENST00000465074 RPL35P42766 123 aaKnown RBP8.3□□□□□ -1.08
XRN1-204ENST00000465074 SULT1A2P50226 295 aa8.3□□□□□ -1.08
XRN1-204ENST00000465074 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
XRN1-204ENST00000465074 COX8CQ7Z4L0 72 aa8.3□□□□□ -1.08
XRN1-204ENST00000465074 SPATA12Q7Z6I5 190 aa8.3□□□□□ -1.08
XRN1-204ENST00000465074 SLC51BQ86UW2 128 aa8.3□□□□□ -1.08
XRN1-204ENST00000465074 C14orf178Q8N769 122 aaPredicted RBP8.3□□□□□ -1.08
XRN1-204ENST00000465074 ATP6V0E2Q8NHE4 81 aa8.3□□□□□ -1.08
XRN1-204ENST00000465074 IFNA1P01562 189 aa8.29□□□□□ -1.08
XRN1-204ENST00000465074 DNLZQ5SXM8 178 aa8.29□□□□□ -1.08
XRN1-204ENST00000465074 ZFP2Q6ZN57 461 aa8.29□□□□□ -1.08
XRN1-204ENST00000465074 ZFP82Q8N141 532 aa8.29□□□□□ -1.08
XRN1-204ENST00000465074 TRAV1-1A0A0B4J248 108 aa8.28□□□□□ -1.08
XRN1-204ENST00000465074 IGHV3-38A0A0C4DH36 116 aa8.28□□□□□ -1.08
XRN1-204ENST00000465074 RAB19A4D1S5 217 aa8.28□□□□□ -1.08
XRN1-204ENST00000465074 IGHV3-30P01768 117 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms