RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 A8MWV9 139 aa9.61□□□□□ -0.87
LIMD1-203ENST00000465039 HOXA5P20719 270 aa9.61□□□□□ -0.87
LIMD1-203ENST00000465039 RAB14P61106 215 aa9.61□□□□□ -0.87
LIMD1-203ENST00000465039 OR5I1Q13606 314 aa9.61□□□□□ -0.87
LIMD1-203ENST00000465039 RNF212Q495C1 297 aa9.61□□□□□ -0.87
LIMD1-203ENST00000465039 FAM74A3Q4VXF1 159 aa9.61□□□□□ -0.87
LIMD1-203ENST00000465039 SYT8Q8NBV8 401 aa9.61□□□□□ -0.87
LIMD1-203ENST00000465039 SACSQ9NZJ4 4579 aa9.61□□□□□ -0.87
LIMD1-203ENST00000465039 TRAV26-1A0A087WT03 109 aa9.6□□□□□ -0.87
LIMD1-203ENST00000465039 RAB19A4D1S5 217 aa9.6□□□□□ -0.87
LIMD1-203ENST00000465039 M0R036 132 aa9.6□□□□□ -0.87
LIMD1-203ENST00000465039 OR5AL1P0C617 328 aa9.6□□□□□ -0.87
LIMD1-203ENST00000465039 ZFP2Q6ZN57 461 aa9.6□□□□□ -0.87
LIMD1-203ENST00000465039 ZFP82Q8N141 532 aa9.6□□□□□ -0.87
LIMD1-203ENST00000465039 OR4C5Q8NGB2 326 aa9.6□□□□□ -0.87
LIMD1-203ENST00000465039 DAZAP1Q96EP5 407 aaKnown RBP9.6□□□□□ -0.87
LIMD1-203ENST00000465039 RYR2Q92736 4967 aa9.59□□□□□ -0.87
LIMD1-203ENST00000465039 H3BVH4 76 aa9.59□□□□□ -0.87
LIMD1-203ENST00000465039 RHODO00212 210 aa9.59□□□□□ -0.87
LIMD1-203ENST00000465039 NXPH4O95158 308 aa9.59□□□□□ -0.87
LIMD1-203ENST00000465039 ARMS2P0C7Q2 107 aa9.59□□□□□ -0.87
LIMD1-203ENST00000465039 MGST1P10620 155 aaKnown RBP9.59□□□□□ -0.87
LIMD1-203ENST00000465039 PEA15Q15121 130 aa9.59□□□□□ -0.87
LIMD1-203ENST00000465039 PRR27Q6MZM9 219 aa9.59□□□□□ -0.87
LIMD1-203ENST00000465039 ZNF575Q86XF7 245 aa9.59□□□□□ -0.87
LIMD1-203ENST00000465039 SMIM7Q9BQ49 75 aa9.59□□□□□ -0.87
LIMD1-203ENST00000465039 SSBP4Q9BWG4 385 aaPredicted RBP9.59□□□□□ -0.87
LIMD1-203ENST00000465039 PHLDA3Q9Y5J5 127 aa9.59□□□□□ -0.87
LIMD1-203ENST00000465039 RS1O15537 224 aa9.58□□□□□ -0.88
LIMD1-203ENST00000465039 SNAI2O43623 268 aa9.58□□□□□ -0.88
LIMD1-203ENST00000465039 P01737 135 aa9.58□□□□□ -0.88
LIMD1-203ENST00000465039 SRP19P09132 144 aaKnown RBP9.58□□□□□ -0.88
LIMD1-203ENST00000465039 FHL2Q14192 279 aa9.58□□□□□ -0.88
LIMD1-203ENST00000465039 POM121L12Q8N7R1 296 aa9.58□□□□□ -0.88
LIMD1-203ENST00000465039 HHLA3Q9XRX5 114 aa9.58□□□□□ -0.88
LIMD1-203ENST00000465039 TRGV4A0A0C4DH28 118 aa9.57□□□□□ -0.88
LIMD1-203ENST00000465039 PGPEP1LA6NFU8 196 aa9.57□□□□□ -0.88
LIMD1-203ENST00000465039 PAX4O43316 350 aa9.57□□□□□ -0.88
LIMD1-203ENST00000465039 LY6G6CO95867 125 aa9.57□□□□□ -0.88
LIMD1-203ENST00000465039 CRYBA4P53673 196 aa9.57□□□□□ -0.88
LIMD1-203ENST00000465039 CT83Q5H943 113 aa9.57□□□□□ -0.88
LIMD1-203ENST00000465039 CLLU1Q5K131 121 aa9.57□□□□□ -0.88
LIMD1-203ENST00000465039 CFAP126Q5VTH2 177 aa9.57□□□□□ -0.88
LIMD1-203ENST00000465039 FAM231DQ6ZW35 169 aa9.57□□□□□ -0.88
LIMD1-203ENST00000465039 SH2D6Q7Z4S9 175 aa9.57□□□□□ -0.88
LIMD1-203ENST00000465039 VSIG2Q96IQ7 327 aa9.57□□□□□ -0.88
LIMD1-203ENST00000465039 ZNF479Q96JC4 524 aa9.57□□□□□ -0.88
LIMD1-203ENST00000465039 NACAE9PAV3 2078 aa9.56□□□□□ -0.88
LIMD1-203ENST00000465039 TRBV6-4A0A1B0GX49 114 aa9.56□□□□□ -0.88
LIMD1-203ENST00000465039 A0A1W2PPQ1 181 aa9.56□□□□□ -0.88
LIMD1-203ENST00000465039 ZNF727A8MUV8 499 aa9.56□□□□□ -0.88
LIMD1-203ENST00000465039 F2Z2F3 143 aa9.56□□□□□ -0.88
LIMD1-203ENST00000465039 OR2D3Q8NGH3 330 aa9.56□□□□□ -0.88
LIMD1-203ENST00000465039 OCC1Q8TAD7 63 aa9.56□□□□□ -0.88
LIMD1-203ENST00000465039 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
LIMD1-203ENST00000465039 RYR3Q15413 4870 aa9.55□□□□□ -0.88
LIMD1-203ENST00000465039 TMSB15BA0A087X1C1 80 aa9.55□□□□□ -0.88
LIMD1-203ENST00000465039 GRIFINA4D1Z8 144 aa9.55□□□□□ -0.88
LIMD1-203ENST00000465039 IGLC6P0CF74 106 aa9.55□□□□□ -0.88
LIMD1-203ENST00000465039 GATA1P15976 413 aaPredicted RBP9.55□□□□□ -0.88
LIMD1-203ENST00000465039 CCL18P55774 89 aa9.55□□□□□ -0.88
LIMD1-203ENST00000465039 MRPL23Q16540 153 aaKnown RBP9.55□□□□□ -0.88
LIMD1-203ENST00000465039 SFRP2Q96HF1 295 aa9.55□□□□□ -0.88
LIMD1-203ENST00000465039 RPP21Q9H633 154 aaKnown RBP9.55□□□□□ -0.88
LIMD1-203ENST00000465039 VPS13DQ5THJ4 4388 aa9.55□□□□□ -0.88
LIMD1-203ENST00000465039 K7EN84 100 aa9.54□□□□□ -0.88
LIMD1-203ENST00000465039 NUDT3O95989 172 aa9.54□□□□□ -0.88
LIMD1-203ENST00000465039 IGHV3-53P01767 116 aa9.54□□□□□ -0.88
LIMD1-203ENST00000465039 SFTA3P0C7M3 94 aa9.54□□□□□ -0.88
LIMD1-203ENST00000465039 RPL19P84098 196 aaKnown RBP9.54□□□□□ -0.88
LIMD1-203ENST00000465039 RHOHQ15669 191 aa9.54□□□□□ -0.88
LIMD1-203ENST00000465039 WDR73Q6P4I2 378 aa9.54□□□□□ -0.88
LIMD1-203ENST00000465039 LINC01551Q86U37 167 aa9.54□□□□□ -0.88
LIMD1-203ENST00000465039 PCNPQ8WW12 178 aaKnown RBP9.54□□□□□ -0.88
LIMD1-203ENST00000465039 A0A0J9YY99 117 aa9.53□□□□□ -0.88
LIMD1-203ENST00000465039 CTRLP40313 264 aa9.53□□□□□ -0.88
LIMD1-203ENST00000465039 CACNG7P62955 275 aa9.53□□□□□ -0.88
LIMD1-203ENST00000465039 DMRTA1Q5VZB9 504 aa9.53□□□□□ -0.88
LIMD1-203ENST00000465039 UFSP1Q6NVU6 142 aa9.53□□□□□ -0.88
LIMD1-203ENST00000465039 UBE2DNLQ8IWF7 75 aa9.53□□□□□ -0.88
LIMD1-203ENST00000465039 FER1L6-AS1Q8NA97 138 aa9.53□□□□□ -0.88
LIMD1-203ENST00000465039 NUDT10Q8NFP7 164 aa9.53□□□□□ -0.88
LIMD1-203ENST00000465039 NUDT11Q96G61 164 aa9.53□□□□□ -0.88
LIMD1-203ENST00000465039 UPK3BQ9BT76 320 aa9.53□□□□□ -0.88
LIMD1-203ENST00000465039 CNFNQ9BYD5 112 aa9.53□□□□□ -0.88
LIMD1-203ENST00000465039 A0A096LPF7 62 aa9.52□□□□□ -0.89
LIMD1-203ENST00000465039 FAM231BA6NCW3 169 aa9.52□□□□□ -0.89
LIMD1-203ENST00000465039 M0R381 172 aa9.52□□□□□ -0.89
LIMD1-203ENST00000465039 CEBPGP53567 150 aa9.52□□□□□ -0.89
LIMD1-203ENST00000465039 TIRAPP58753 221 aa9.52□□□□□ -0.89
LIMD1-203ENST00000465039 TMEM241Q24JQ0 296 aa9.52□□□□□ -0.89
LIMD1-203ENST00000465039 SOHLH1Q5JUK2 328 aa9.52□□□□□ -0.89
LIMD1-203ENST00000465039 SPANXN1Q5VSR9 72 aa9.52□□□□□ -0.89
LIMD1-203ENST00000465039 OR10AG1Q8NH19 301 aa9.52□□□□□ -0.89
LIMD1-203ENST00000465039 AP1S3Q96PC3 154 aa9.52□□□□□ -0.89
LIMD1-203ENST00000465039 PRADC1Q9BSG0 188 aa9.52□□□□□ -0.89
LIMD1-203ENST00000465039 NAT8Q9UHE5 227 aa9.52□□□□□ -0.89
LIMD1-203ENST00000465039 A8MWL6 223 aa9.51□□□□□ -0.89
LIMD1-203ENST00000465039 SRIP30626 198 aa9.51□□□□□ -0.89
LIMD1-203ENST00000465039 NEGR1Q7Z3B1 354 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms