RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 GNG5P63218 68 aa9.6□□□□□ -0.87
MCF2L-220ENST00000464800 DPPA3Q6W0C5 159 aa9.6□□□□□ -0.87
MCF2L-220ENST00000464800 DAZ4Q86SG3 579 aaKnown RBP9.6□□□□□ -0.87
MCF2L-220ENST00000464800 BAALCQ8WXS3 180 aa9.6□□□□□ -0.87
MCF2L-220ENST00000464800 SGK494Q96LW2 274 aa9.6□□□□□ -0.87
MCF2L-220ENST00000464800 MARVELD1Q9BSK0 173 aa9.6□□□□□ -0.87
MCF2L-220ENST00000464800 DAZ3Q9NR90 486 aaKnown RBP9.6□□□□□ -0.87
MCF2L-220ENST00000464800 HMGB3O15347 200 aaKnown RBP9.59□□□□□ -0.87
MCF2L-220ENST00000464800 RAB2AP61019 212 aa9.59□□□□□ -0.87
MCF2L-220ENST00000464800 Q8N976 141 aa9.59□□□□□ -0.87
MCF2L-220ENST00000464800 CIRBP-AS1Q8TBR5 109 aa9.59□□□□□ -0.87
MCF2L-220ENST00000464800 RMI2Q96E14 147 aa9.59□□□□□ -0.87
MCF2L-220ENST00000464800 ZNF506Q5JVG8 444 aa9.58□□□□□ -0.88
MCF2L-220ENST00000464800 OR10G9Q8NGN4 311 aa9.58□□□□□ -0.88
MCF2L-220ENST00000464800 OR10G7Q8NGN6 311 aa9.58□□□□□ -0.88
MCF2L-220ENST00000464800 C9orf85Q96MD7 179 aa9.58□□□□□ -0.88
MCF2L-220ENST00000464800 NDFIP1Q9BT67 221 aa9.58□□□□□ -0.88
MCF2L-220ENST00000464800 C11orf21Q9P2W6 132 aa9.58□□□□□ -0.88
MCF2L-220ENST00000464800 IGLV2-8P01709 118 aa9.57□□□□□ -0.88
MCF2L-220ENST00000464800 ZNF80P51504 273 aaPredicted RBP9.57□□□□□ -0.88
MCF2L-220ENST00000464800 LRP1Q07954 4544 aaKnown RBP9.57□□□□□ -0.88
MCF2L-220ENST00000464800 HMCN2Q8NDA2 5059 aa9.56□□□□□ -0.88
MCF2L-220ENST00000464800 A0A087WWC5 75 aa9.56□□□□□ -0.88
MCF2L-220ENST00000464800 SERTM2A0A1B0GWG4 89 aa9.56□□□□□ -0.88
MCF2L-220ENST00000464800 GAGE12JA6NER3 117 aa9.56□□□□□ -0.88
MCF2L-220ENST00000464800 TAAR5O14804 337 aa9.56□□□□□ -0.88
MCF2L-220ENST00000464800 ARL14EPLP0DKL9 152 aa9.56□□□□□ -0.88
MCF2L-220ENST00000464800 LINC00694P0DN24 101 aa9.56□□□□□ -0.88
MCF2L-220ENST00000464800 GAGE1Q13065 139 aa9.56□□□□□ -0.88
MCF2L-220ENST00000464800 GAGE4Q13068 117 aa9.56□□□□□ -0.88
MCF2L-220ENST00000464800 GAGE5Q13069 117 aa9.56□□□□□ -0.88
MCF2L-220ENST00000464800 GAGE13Q4V321 117 aa9.56□□□□□ -0.88
MCF2L-220ENST00000464800 PTH2Q96A98 100 aa9.56□□□□□ -0.88
MCF2L-220ENST00000464800 URGCP-MRPS24S4R325 110 aa9.56□□□□□ -0.88
MCF2L-220ENST00000464800 IGKV2D-24A0A075B6R9 120 aa9.55□□□□□ -0.88
MCF2L-220ENST00000464800 RNF222A6NCQ9 220 aa9.55□□□□□ -0.88
MCF2L-220ENST00000464800 PGPEP1LA6NFU8 196 aa9.55□□□□□ -0.88
MCF2L-220ENST00000464800 TCRAP04437 139 aa9.55□□□□□ -0.88
MCF2L-220ENST00000464800 DEFA1P59665 94 aa9.55□□□□□ -0.88
MCF2L-220ENST00000464800 DEFA3P59666 94 aa9.55□□□□□ -0.88
MCF2L-220ENST00000464800 C5orf17Q8NAS9 161 aa9.55□□□□□ -0.88
MCF2L-220ENST00000464800 K7EQM0 130 aa9.54□□□□□ -0.88
MCF2L-220ENST00000464800 GCGP01275 180 aa9.54□□□□□ -0.88
MCF2L-220ENST00000464800 SEC11BP0C7V7 166 aa9.54□□□□□ -0.88
MCF2L-220ENST00000464800 STAG3L2P0CL84 134 aa9.54□□□□□ -0.88
MCF2L-220ENST00000464800 STAG3L3P0CL85 134 aa9.54□□□□□ -0.88
MCF2L-220ENST00000464800 CDC34P49427 236 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-220ENST00000464800 ZFP2Q6ZN57 461 aa9.54□□□□□ -0.88
MCF2L-220ENST00000464800 CYB561D1Q8N8Q1 229 aa9.54□□□□□ -0.88
MCF2L-220ENST00000464800 TMEM75Q8N9X5 138 aa9.54□□□□□ -0.88
MCF2L-220ENST00000464800 PARLQ9H300 379 aa9.54□□□□□ -0.88
MCF2L-220ENST00000464800 PSG8Q9UQ74 426 aa9.54□□□□□ -0.88
MCF2L-220ENST00000464800 A8MWV9 139 aa9.53□□□□□ -0.88
MCF2L-220ENST00000464800 IGLV2-11P01706 119 aa9.53□□□□□ -0.88
MCF2L-220ENST00000464800 RNASE3P12724 160 aaKnown RBP9.53□□□□□ -0.88
MCF2L-220ENST00000464800 RPL37AP61513 92 aaKnown RBP9.53□□□□□ -0.88
MCF2L-220ENST00000464800 ZFP69Q49AA0 526 aa9.53□□□□□ -0.88
MCF2L-220ENST00000464800 SMUG1Q53HV7 270 aa9.53□□□□□ -0.88
MCF2L-220ENST00000464800 SUN5Q8TC36 379 aa9.53□□□□□ -0.88
MCF2L-220ENST00000464800 RAB24Q969Q5 203 aa9.53□□□□□ -0.88
MCF2L-220ENST00000464800 UBR4Q5T4S7 5183 aa9.53□□□□□ -0.88
MCF2L-220ENST00000464800 GCHFRP30047 84 aa9.52□□□□□ -0.89
MCF2L-220ENST00000464800 FGF8P55075 233 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-220ENST00000464800 SUMO1P63165 101 aaKnown RBP9.52□□□□□ -0.89
MCF2L-220ENST00000464800 FLI1Q01543 452 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-220ENST00000464800 PRNTQ86SH4 94 aa9.52□□□□□ -0.89
MCF2L-220ENST00000464800 HSD17B11Q8NBQ5 300 aa9.52□□□□□ -0.89
MCF2L-220ENST00000464800 OR2G3Q8NGZ4 309 aa9.52□□□□□ -0.89
MCF2L-220ENST00000464800 DNAJC30Q96LL9 226 aa9.52□□□□□ -0.89
MCF2L-220ENST00000464800 KLK12Q9UKR0 248 aa9.52□□□□□ -0.89
MCF2L-220ENST00000464800 EPDR1Q9UM22 224 aa9.52□□□□□ -0.89
MCF2L-220ENST00000464800 LGALSLQ3ZCW2 172 aaPredicted RBP9.51□□□□□ -0.89
MCF2L-220ENST00000464800 SAPCD1Q5SSQ6 148 aa9.51□□□□□ -0.89
MCF2L-220ENST00000464800 NIT1Q86X76 327 aa9.51□□□□□ -0.89
MCF2L-220ENST00000464800 OR2T35Q8NGX2 323 aa9.51□□□□□ -0.89
MCF2L-220ENST00000464800 C14orf177Q52M58 125 aa9.5□□□□□ -0.89
MCF2L-220ENST00000464800 PIK3CD-AS1Q5SR53 167 aa9.5□□□□□ -0.89
MCF2L-220ENST00000464800 UBE2WQ96B02 151 aa9.5□□□□□ -0.89
MCF2L-220ENST00000464800 LINC00479Q96M42 142 aa9.5□□□□□ -0.89
MCF2L-220ENST00000464800 PSMG3Q9BT73 122 aaPredicted RBP9.5□□□□□ -0.89
MCF2L-220ENST00000464800 SAMD10Q9BYL1 202 aa9.5□□□□□ -0.89
MCF2L-220ENST00000464800 TMEM167BQ9NRX6 74 aa9.5□□□□□ -0.89
MCF2L-220ENST00000464800 Q9UF83 564 aa9.5□□□□□ -0.89
MCF2L-220ENST00000464800 CXorf1O96002 111 aa9.49□□□□□ -0.89
MCF2L-220ENST00000464800 MBP02144 154 aa9.49□□□□□ -0.89
MCF2L-220ENST00000464800 S100A4P26447 101 aaKnown RBP9.49□□□□□ -0.89
MCF2L-220ENST00000464800 ATP6V0CP27449 155 aa9.49□□□□□ -0.89
MCF2L-220ENST00000464800 ELOBQ15370 118 aa9.49□□□□□ -0.89
MCF2L-220ENST00000464800 KCNIP4Q6PIL6 250 aa9.49□□□□□ -0.89
MCF2L-220ENST00000464800 C14orf178Q8N769 122 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-220ENST00000464800 A0A087WX48 190 aa9.48□□□□□ -0.89
MCF2L-220ENST00000464800 IGKV3D-20A0A0C4DH25 116 aa9.48□□□□□ -0.89
MCF2L-220ENST00000464800 PTTG1O95997 202 aa9.48□□□□□ -0.89
MCF2L-220ENST00000464800 HNRNPA3P51991 378 aaKnown RBP9.48□□□□□ -0.89
MCF2L-220ENST00000464800 SERF2P84101 59 aa9.48□□□□□ -0.89
MCF2L-220ENST00000464800 UFSP1Q6NVU6 142 aa9.48□□□□□ -0.89
MCF2L-220ENST00000464800 ATRAIDQ6UW56 229 aa9.48□□□□□ -0.89
MCF2L-220ENST00000464800 CHCHD7Q9BUK0 85 aa9.48□□□□□ -0.89
MCF2L-220ENST00000464800 ACTR3CQ9C0K3 210 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-220ENST00000464800 FAT3Q8TDW7 4589 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms