RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 TMEM219Q86XT9 240 aa2.97□□□□□ -1.93
CCNL1-204ENST00000464316 LINC00526Q96FQ7 95 aa2.97□□□□□ -1.93
CCNL1-204ENST00000464316 EDA2RQ9HAV5 297 aa2.97□□□□□ -1.93
CCNL1-204ENST00000464316 TPRP12270 2363 aaKnown RBP2.97□□□□□ -1.93
CCNL1-204ENST00000464316 TRANK1O15050 2925 aa2.96□□□□□ -1.93
CCNL1-204ENST00000464316 NAV3Q8IVL0 2385 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 IGHV4OR15-8A0A075B7B6 117 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 A0A087WW49 117 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 TRAV8-3A0A0A6YYJ7 113 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 IGHV7-4-1A0A0J9YVY3 117 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 IGHV3-23P01764 117 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 FAM27E3Q08E93 113 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 ZNF876PQ49A33 203 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 MAFAQ8NHW3 353 aaPredicted RBP2.96□□□□□ -1.94
CCNL1-204ENST00000464316 FANCD2OSQ96PS1 177 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 TIMM21Q9BVV7 248 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 CADP27708 2225 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 IGHV3-35A0A0C4DH35 117 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 B9A039 149 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 PRAC2D3DTV9 90 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 CXCL5P42830 114 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 HERVK_113P63121 156 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 ZNF784Q8NCA9 323 aaPredicted RBP2.96□□□□□ -1.94
CCNL1-204ENST00000464316 FDCSPQ8NFU4 85 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 RPL39LQ96EH5 51 aaKnown RBP2.96□□□□□ -1.94
CCNL1-204ENST00000464316 ZNF318Q5VUA4 2279 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 TRBV7-1A0A0A6YYK4 115 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 SMIM9A6NGZ8 99 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 RNASE4P34096 147 aaKnown RBP2.96□□□□□ -1.94
CCNL1-204ENST00000464316 ID1P41134 155 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 KLRB1Q12918 225 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 C15orf32Q32M92 178 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 TMEM105Q8N8V8 129 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 LY6G5BQ8NDX9 201 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 DUX3Q96PT4 197 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 CTSZQ9UBR2 303 aa2.96□□□□□ -1.94
CCNL1-204ENST00000464316 CSDC2Q9Y534 153 aaKnown RBP2.96□□□□□ -1.94
CCNL1-204ENST00000464316 PTPRBP23467 1997 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 WNK2Q9Y3S1 2297 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 IGIPA6NJ69 53 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 TRIAP1O43715 76 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 LINC00694P0DN24 101 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 CRIP2P52943 208 aaPredicted RBP2.95□□□□□ -1.94
CCNL1-204ENST00000464316 Q6ZS46 218 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 PRSS33Q8NF86 280 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 OVOL2Q9BRP0 275 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 PPDPFQ9H3Y8 114 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 SMAD5-AS1Q9Y6J3 95 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 IGHV3OR16-8A0A075B7F1 116 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 TMEM223A0PJW6 202 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 H7C423 109 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 LST1O00453 97 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 COX7CP15954 63 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 BSPH1Q075Z2 132 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 LPAL2Q16609 132 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 ECSCRQ19T08 205 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 MINOS1Q5TGZ0 78 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 CLEC19AQ6UXS0 136 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 FAM110DQ8TAY7 271 aaPredicted RBP2.95□□□□□ -1.94
CCNL1-204ENST00000464316 NDUFA12Q9UI09 145 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 MINOS1-NBL1R4GNA1 71 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 IGHV3-66A0A0C4DH42 116 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 A0A0J9YXY3 114 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 M0R1W7 72 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 DEFB121Q5J5C9 76 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 ATP1A1-AS1Q5TC04 95 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 C11orf21Q9P2W6 132 aa2.95□□□□□ -1.94
CCNL1-204ENST00000464316 IGLV4-69A0A075B6H9 119 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 IGHV3OR16-13A0A075B7E8 117 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 IGHV3-74A0A0B4J1X5 117 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 LINC01548A6NM66 108 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 DNAL4O96015 105 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 UBE2E1P51965 193 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 POLR2KP53803 58 aaKnown RBP2.94□□□□□ -1.94
CCNL1-204ENST00000464316 DGAT2L7PQ6IED9 249 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 LINC01587Q99440 93 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 LINC00527Q9UJ94 153 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 IGHV3-64A0A075B6Q5 118 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 TRBV6-5A0A0K0K1A5 114 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 I3L3M4 83 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 PLXNB1O43157 2135 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 CD28P10747 220 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 TMEM258P61165 79 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 DEFB109BQ30KR1 87 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 S100A7L2Q5SY68 101 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 FAM74A4Q5TZK3 123 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 IGFL2Q6UWQ7 119 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 PEMTQ9UBM1 199 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 TRBV27A0A0K0K1C4 114 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 LY6LH3BQJ8 138 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 CRYGDP07320 174 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 MIAQ16674 131 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 C1orf210Q8IVY1 113 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 C3orf56Q8N813 242 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 DAND5Q8N907 189 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 ARRDC1-AS1Q9H2J1 176 aa2.94□□□□□ -1.94
CCNL1-204ENST00000464316 DSCAMO60469 2012 aa2.93□□□□□ -1.94
CCNL1-204ENST00000464316 IGHV3-49A0A0A0MS15 119 aa2.93□□□□□ -1.94
CCNL1-204ENST00000464316 TIMM17BO60830 172 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms