RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 NHLRC2Q8NBF2 726 aa12.77□□□□□ -0.37
SF3A1-205ENST00000463818 CFAP126Q5VTH2 177 aa12.76□□□□□ -0.37
SF3A1-205ENST00000463818 SLC25A29Q8N8R3 303 aa12.76□□□□□ -0.37
SF3A1-205ENST00000463818 TMEM75Q8N9X5 138 aa12.76□□□□□ -0.37
SF3A1-205ENST00000463818 ZNF471Q9BX82 626 aaPredicted RBP12.76□□□□□ -0.37
SF3A1-205ENST00000463818 SCRT2Q9NQ03 307 aa12.76□□□□□ -0.37
SF3A1-205ENST00000463818 IGHV3-73A0A0B4J1V6 119 aa12.75□□□□□ -0.37
SF3A1-205ENST00000463818 A0A1W2PRE2 83 aa12.75□□□□□ -0.37
SF3A1-205ENST00000463818 PGPEP1LA6NFU8 196 aa12.75□□□□□ -0.37
SF3A1-205ENST00000463818 CRYGDP07320 174 aa12.75□□□□□ -0.37
SF3A1-205ENST00000463818 TIRAPP58753 221 aa12.75□□□□□ -0.37
SF3A1-205ENST00000463818 ZFP69Q49AA0 526 aa12.75□□□□□ -0.37
SF3A1-205ENST00000463818 SAPCD1Q5SSQ6 148 aa12.75□□□□□ -0.37
SF3A1-205ENST00000463818 LINC00479Q96M42 142 aa12.75□□□□□ -0.37
SF3A1-205ENST00000463818 C9orf85Q96MD7 179 aa12.75□□□□□ -0.37
SF3A1-205ENST00000463818 A0A087WTM6 91 aa12.74□□□□□ -0.37
SF3A1-205ENST00000463818 TRAV34A0A0B4J273 112 aa12.74□□□□□ -0.37
SF3A1-205ENST00000463818 CIDEAO60543 219 aa12.74□□□□□ -0.37
SF3A1-205ENST00000463818 TPT1P13693 172 aaKnown RBP12.74□□□□□ -0.37
SF3A1-205ENST00000463818 PTH2Q96A98 100 aa12.74□□□□□ -0.37
SF3A1-205ENST00000463818 TRBV6-4A0A1B0GX49 114 aa12.73□□□□□ -0.37
SF3A1-205ENST00000463818 PFDN1O60925 122 aa12.73□□□□□ -0.37
SF3A1-205ENST00000463818 IFNA7P01567 189 aa12.73□□□□□ -0.37
SF3A1-205ENST00000463818 PPT1P50897 306 aa12.73□□□□□ -0.37
SF3A1-205ENST00000463818 ZNF506Q5JVG8 444 aa12.73□□□□□ -0.37
SF3A1-205ENST00000463818 C10orf126Q8N4M7 172 aa12.73□□□□□ -0.37
SF3A1-205ENST00000463818 PRADC1Q9BSG0 188 aa12.73□□□□□ -0.37
SF3A1-205ENST00000463818 ARL2-SNX15V9GYD0 113 aa12.73□□□□□ -0.37
SF3A1-205ENST00000463818 hCG_2014768A0A024R1R8 64 aa12.72□□□□□ -0.37
SF3A1-205ENST00000463818 IGHV3-38A0A0C4DH36 116 aa12.72□□□□□ -0.37
SF3A1-205ENST00000463818 A0A1B0GVG6 124 aa12.72□□□□□ -0.37
SF3A1-205ENST00000463818 MAP1LC3B2A6NCE7 125 aa12.72□□□□□ -0.37
SF3A1-205ENST00000463818 RNASE3P12724 160 aaKnown RBP12.72□□□□□ -0.37
SF3A1-205ENST00000463818 CDPF1Q6NVV7 123 aa12.72□□□□□ -0.37
SF3A1-205ENST00000463818 MBD3L1Q8WWY6 194 aa12.72□□□□□ -0.37
SF3A1-205ENST00000463818 MAP1LC3BQ9GZQ8 125 aa12.72□□□□□ -0.37
SF3A1-205ENST00000463818 IGKV3D-20A0A0C4DH25 116 aa12.71□□□□□ -0.37
SF3A1-205ENST00000463818 FHITP49789 147 aa12.71□□□□□ -0.37
SF3A1-205ENST00000463818 UBE2G2P60604 165 aa12.71□□□□□ -0.37
SF3A1-205ENST00000463818 RHOHQ15669 191 aa12.71□□□□□ -0.37
SF3A1-205ENST00000463818 C9orf62Q8N4C0 152 aa12.71□□□□□ -0.37
SF3A1-205ENST00000463818 TRAV8-6A0A0B4J262 113 aa12.7□□□□□ -0.38
SF3A1-205ENST00000463818 FABP5P3A8MUU1 101 aa12.7□□□□□ -0.38
SF3A1-205ENST00000463818 FGF8P55075 233 aaPredicted RBP12.7□□□□□ -0.38
SF3A1-205ENST00000463818 SLC51BQ86UW2 128 aa12.7□□□□□ -0.38
SF3A1-205ENST00000463818 NKX6-2Q9C056 277 aaPredicted RBP12.7□□□□□ -0.38
SF3A1-205ENST00000463818 PEX7O00628 323 aa12.69□□□□□ -0.38
SF3A1-205ENST00000463818 S100A4P26447 101 aaKnown RBP12.69□□□□□ -0.38
SF3A1-205ENST00000463818 LINC01556Q5JQF7 62 aa12.69□□□□□ -0.38
SF3A1-205ENST00000463818 OR10J3Q5JRS4 329 aa12.69□□□□□ -0.38
SF3A1-205ENST00000463818 FAM74A7A6NL05 159 aa12.68□□□□□ -0.38
SF3A1-205ENST00000463818 MGST1P10620 155 aaKnown RBP12.68□□□□□ -0.38
SF3A1-205ENST00000463818 RAB5CP51148 216 aa12.68□□□□□ -0.38
SF3A1-205ENST00000463818 EIF5AL1Q6IS14 154 aaKnown RBP12.68□□□□□ -0.38
SF3A1-205ENST00000463818 Q6ZSN1 163 aa12.68□□□□□ -0.38
SF3A1-205ENST00000463818 ATP6V0E2Q8NHE4 81 aa12.68□□□□□ -0.38
SF3A1-205ENST00000463818 TCEAL7Q9BRU2 100 aa12.68□□□□□ -0.38
SF3A1-205ENST00000463818 IBA57-AS1B1ANH7 110 aa12.67□□□□□ -0.38
SF3A1-205ENST00000463818 XGP55808 180 aa12.67□□□□□ -0.38
SF3A1-205ENST00000463818 KRTAP10-1P60331 282 aa12.67□□□□□ -0.38
SF3A1-205ENST00000463818 LELP1Q5T871 98 aa12.67□□□□□ -0.38
SF3A1-205ENST00000463818 HIST1H2BAQ96A08 127 aa12.67□□□□□ -0.38
SF3A1-205ENST00000463818 GTSF1LQ9H1H1 148 aa12.67□□□□□ -0.38
SF3A1-205ENST00000463818 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
SF3A1-205ENST00000463818 TRAV1-1A0A0B4J248 108 aa12.66□□□□□ -0.38
SF3A1-205ENST00000463818 A8MWV9 139 aa12.66□□□□□ -0.38
SF3A1-205ENST00000463818 IGHV3-30P01768 117 aa12.66□□□□□ -0.38
SF3A1-205ENST00000463818 IGHV3-33P01772 117 aa12.66□□□□□ -0.38
SF3A1-205ENST00000463818 IGHV3-30-3P0DP02 117 aa12.66□□□□□ -0.38
SF3A1-205ENST00000463818 IGHV3-30-5P0DP03 117 aa12.66□□□□□ -0.38
SF3A1-205ENST00000463818 ASIPP42127 132 aa12.66□□□□□ -0.38
SF3A1-205ENST00000463818 CRIP1P50238 77 aa12.66□□□□□ -0.38
SF3A1-205ENST00000463818 ZFP2Q6ZN57 461 aa12.66□□□□□ -0.38
SF3A1-205ENST00000463818 FAM213BQ8TBF2 198 aa12.66□□□□□ -0.38
SF3A1-205ENST00000463818 PARLQ9H300 379 aa12.66□□□□□ -0.38
SF3A1-205ENST00000463818 B4DEV8 164 aa12.65□□□□□ -0.38
SF3A1-205ENST00000463818 PSCAO43653 123 aa12.65□□□□□ -0.38
SF3A1-205ENST00000463818 SULT1A2P50226 295 aa12.65□□□□□ -0.38
SF3A1-205ENST00000463818 PIK3CD-AS1Q5SR53 167 aa12.65□□□□□ -0.38
SF3A1-205ENST00000463818 Q86TA4 180 aa12.65□□□□□ -0.38
SF3A1-205ENST00000463818 JPT2Q9H910 190 aa12.65□□□□□ -0.38
SF3A1-205ENST00000463818 DMRTA1Q5VZB9 504 aa12.64□□□□□ -0.39
SF3A1-205ENST00000463818 SFT2D1Q8WV19 159 aa12.64□□□□□ -0.39
SF3A1-205ENST00000463818 ZC2HC1AQ96GY0 325 aa12.64□□□□□ -0.39
SF3A1-205ENST00000463818 IL36BQ9NZH7 164 aa12.64□□□□□ -0.39
SF3A1-205ENST00000463818 ZFP30Q9Y2G7 519 aa12.64□□□□□ -0.39
SF3A1-205ENST00000463818 LRCOL1A6NCL2 159 aa12.63□□□□□ -0.39
SF3A1-205ENST00000463818 GAGE12JA6NER3 117 aa12.63□□□□□ -0.39
SF3A1-205ENST00000463818 KRBOX1C9JBD0 128 aa12.63□□□□□ -0.39
SF3A1-205ENST00000463818 H2AFB1P0C5Y9 115 aa12.63□□□□□ -0.39
SF3A1-205ENST00000463818 GCSHP23434 173 aa12.63□□□□□ -0.39
SF3A1-205ENST00000463818 GAGE1Q13065 139 aa12.63□□□□□ -0.39
SF3A1-205ENST00000463818 GAGE4Q13068 117 aa12.63□□□□□ -0.39
SF3A1-205ENST00000463818 GAGE5Q13069 117 aa12.63□□□□□ -0.39
SF3A1-205ENST00000463818 GAGE13Q4V321 117 aa12.63□□□□□ -0.39
SF3A1-205ENST00000463818 COX8CQ7Z4L0 72 aa12.63□□□□□ -0.39
SF3A1-205ENST00000463818 SAMD10Q9BYL1 202 aa12.63□□□□□ -0.39
SF3A1-205ENST00000463818 Q9HAA7 133 aa12.63□□□□□ -0.39
SF3A1-205ENST00000463818 GRIFINA4D1Z8 144 aa12.62□□□□□ -0.39
SF3A1-205ENST00000463818 EPM2AB3EWF7 344 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms