RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 BAGE2Q86Y30 109 aa16.02■□□□□ 0.16
SSNA1-203ENST00000463511 MLST8Q9BVC4 326 aa16.02■□□□□ 0.16
SSNA1-203ENST00000463511 EIF5A2Q9GZV4 153 aaKnown RBP16.02■□□□□ 0.16
SSNA1-203ENST00000463511 RAB19A4D1S5 217 aa16.01■□□□□ 0.15
SSNA1-203ENST00000463511 SNURFLB1AK76 121 aa16.01■□□□□ 0.15
SSNA1-203ENST00000463511 TDRG1Q3Y452 100 aa16.01■□□□□ 0.15
SSNA1-203ENST00000463511 FAM159AQ6UWV7 190 aa16.01■□□□□ 0.15
SSNA1-203ENST00000463511 NHLRC2Q8NBF2 726 aa16.01■□□□□ 0.15
SSNA1-203ENST00000463511 C11orf72Q8NBR9 251 aa16.01■□□□□ 0.15
SSNA1-203ENST00000463511 NAGKQ9UJ70 344 aa16.01■□□□□ 0.15
SSNA1-203ENST00000463511 MRPS16Q9Y3D3 137 aaKnown RBP16.01■□□□□ 0.15
SSNA1-203ENST00000463511 FABP5P3A8MUU1 101 aa16■□□□□ 0.15
SSNA1-203ENST00000463511 A0A1W2PPQ1 181 aa15.99■□□□□ 0.15
SSNA1-203ENST00000463511 TMEM250H0YL14 139 aa15.99■□□□□ 0.15
SSNA1-203ENST00000463511 GNRH2O43555 120 aa15.99■□□□□ 0.15
SSNA1-203ENST00000463511 NDUFS6O75380 124 aaKnown RBP15.99■□□□□ 0.15
SSNA1-203ENST00000463511 BTF3P20290 206 aaKnown RBP15.99■□□□□ 0.15
SSNA1-203ENST00000463511 ZNF674Q2M3X9 581 aa15.99■□□□□ 0.15
SSNA1-203ENST00000463511 GSN-AS1Q9NRJ2 163 aa15.99■□□□□ 0.15
SSNA1-203ENST00000463511 H3BNG1 76 aa15.98■□□□□ 0.15
SSNA1-203ENST00000463511 IGLV2-8P01709 118 aa15.98■□□□□ 0.15
SSNA1-203ENST00000463511 CENPWQ5EE01 88 aa15.98■□□□□ 0.15
SSNA1-203ENST00000463511 IBA57Q5T440 356 aaKnown RBP15.98■□□□□ 0.15
SSNA1-203ENST00000463511 TRBV20OR9-2A0A075B6H5 130 aa15.97■□□□□ 0.15
SSNA1-203ENST00000463511 SH2D1AO60880 128 aa15.97■□□□□ 0.15
SSNA1-203ENST00000463511 RAB14P61106 215 aa15.97■□□□□ 0.15
SSNA1-203ENST00000463511 Q6ZTI0 123 aa15.97■□□□□ 0.15
SSNA1-203ENST00000463511 KCNS1Q96KK3 526 aa15.97■□□□□ 0.15
SSNA1-203ENST00000463511 MDFICQ9P1T7 246 aa15.97■□□□□ 0.15
SSNA1-203ENST00000463511 TRGV11A0A075B6L2 103 aa15.96■□□□□ 0.15
SSNA1-203ENST00000463511 TYMSP04818 313 aa15.96■□□□□ 0.15
SSNA1-203ENST00000463511 SRP19P09132 144 aaKnown RBP15.96■□□□□ 0.15
SSNA1-203ENST00000463511 TCL1AP56279 114 aa15.96■□□□□ 0.15
SSNA1-203ENST00000463511 DAZ2Q13117 558 aaKnown RBP15.96■□□□□ 0.15
SSNA1-203ENST00000463511 FAM162BQ5T6X4 162 aa15.96■□□□□ 0.15
SSNA1-203ENST00000463511 PARLQ9H300 379 aa15.96■□□□□ 0.15
SSNA1-203ENST00000463511 SDF2L1Q9HCN8 221 aa15.96■□□□□ 0.15
SSNA1-203ENST00000463511 IGKV3D-20A0A0C4DH25 116 aa15.95■□□□□ 0.14
SSNA1-203ENST00000463511 GNG4P50150 75 aa15.95■□□□□ 0.14
SSNA1-203ENST00000463511 LINC00315P59091 139 aa15.95■□□□□ 0.14
SSNA1-203ENST00000463511 SRSF3P84103 164 aaKnown RBP15.95■□□□□ 0.14
SSNA1-203ENST00000463511 CLLU1Q5K131 121 aa15.95■□□□□ 0.14
SSNA1-203ENST00000463511 IGHV3-16A0A0C4DH30 117 aa15.94■□□□□ 0.14
SSNA1-203ENST00000463511 ZNF415Q09FC8 603 aa15.94■□□□□ 0.14
SSNA1-203ENST00000463511 VSIG2Q96IQ7 327 aa15.94■□□□□ 0.14
SSNA1-203ENST00000463511 A0A096LPF7 62 aa15.93■□□□□ 0.14
SSNA1-203ENST00000463511 PGPEP1LA6NFU8 196 aa15.93■□□□□ 0.14
SSNA1-203ENST00000463511 C9JQL5 133 aa15.93■□□□□ 0.14
SSNA1-203ENST00000463511 SMIM12Q96EX1 92 aa15.93■□□□□ 0.14
SSNA1-203ENST00000463511 KRBOX1C9JBD0 128 aa15.92■□□□□ 0.14
SSNA1-203ENST00000463511 C9JCJ5 164 aa15.92■□□□□ 0.14
SSNA1-203ENST00000463511 ORM1P02763 201 aa15.92■□□□□ 0.14
SSNA1-203ENST00000463511 PEA15Q15121 130 aa15.92■□□□□ 0.14
SSNA1-203ENST00000463511 TRGV2A0A075B6R0 118 aa15.91■□□□□ 0.14
SSNA1-203ENST00000463511 SPINK4O60575 86 aa15.91■□□□□ 0.14
SSNA1-203ENST00000463511 CEBPGP53567 150 aa15.91■□□□□ 0.14
SSNA1-203ENST00000463511 PRR27Q6MZM9 219 aa15.91■□□□□ 0.14
SSNA1-203ENST00000463511 Q6ZRN7 208 aaPredicted RBP15.91■□□□□ 0.14
SSNA1-203ENST00000463511 B4DEV8 164 aa15.9■□□□□ 0.14
SSNA1-203ENST00000463511 M0R036 132 aa15.9■□□□□ 0.14
SSNA1-203ENST00000463511 MGST1P10620 155 aaKnown RBP15.9■□□□□ 0.14
SSNA1-203ENST00000463511 LINC01559Q495D7 138 aa15.9■□□□□ 0.14
SSNA1-203ENST00000463511 OCC1Q8TAD7 63 aa15.9■□□□□ 0.14
SSNA1-203ENST00000463511 SPXQ9BT56 116 aa15.9■□□□□ 0.14
SSNA1-203ENST00000463511 SMDT1Q9H4I9 107 aa15.9■□□□□ 0.14
SSNA1-203ENST00000463511 FUSP35637 526 aaKnown RBP eCLIP15.89■□□□□ 0.13
SSNA1-203ENST00000463511 HERC1Q15751 4861 aa15.88■□□□□ 0.13
SSNA1-203ENST00000463511 TRGV1A0A0A0MS02 117 aa15.88■□□□□ 0.13
SSNA1-203ENST00000463511 EPM2AB3EWF7 344 aa15.88■□□□□ 0.13
SSNA1-203ENST00000463511 SIVA1O15304 175 aa15.88■□□□□ 0.13
SSNA1-203ENST00000463511 RNASE3P12724 160 aaKnown RBP15.88■□□□□ 0.13
SSNA1-203ENST00000463511 DNLZQ5SXM8 178 aa15.88■□□□□ 0.13
SSNA1-203ENST00000463511 MRPL16Q9NX20 251 aaKnown RBP15.88■□□□□ 0.13
SSNA1-203ENST00000463511 C19orf71A6NCJ1 209 aa15.87■□□□□ 0.13
SSNA1-203ENST00000463511 C9orf85Q96MD7 179 aa15.87■□□□□ 0.13
SSNA1-203ENST00000463511 C18orf15Q96N68 181 aa15.87■□□□□ 0.13
SSNA1-203ENST00000463511 SMIM7Q9BQ49 75 aa15.87■□□□□ 0.13
SSNA1-203ENST00000463511 TMSB15BA0A087X1C1 80 aa15.86■□□□□ 0.13
SSNA1-203ENST00000463511 GRIFINA4D1Z8 144 aa15.86■□□□□ 0.13
SSNA1-203ENST00000463511 ZNF727A8MUV8 499 aa15.86■□□□□ 0.13
SSNA1-203ENST00000463511 K7EN84 100 aa15.86■□□□□ 0.13
SSNA1-203ENST00000463511 RPL19P84098 196 aaKnown RBP15.86■□□□□ 0.13
SSNA1-203ENST00000463511 M0R2P5 195 aa15.85■□□□□ 0.13
SSNA1-203ENST00000463511 NXPH4O95158 308 aa15.85■□□□□ 0.13
SSNA1-203ENST00000463511 ASIPP42127 132 aa15.85■□□□□ 0.13
SSNA1-203ENST00000463511 BIN3Q9NQY0 253 aa15.85■□□□□ 0.13
SSNA1-203ENST00000463511 RASL10AQ92737 203 aa15.84■□□□□ 0.13
SSNA1-203ENST00000463511 DAZAP1Q96EP5 407 aaKnown RBP15.84■□□□□ 0.13
SSNA1-203ENST00000463511 ICOSQ9Y6W8 199 aa15.84■□□□□ 0.13
SSNA1-203ENST00000463511 LY96Q9Y6Y9 160 aa15.84■□□□□ 0.13
SSNA1-203ENST00000463511 DMBT1Q9UGM3 2413 aaPredicted RBP15.84■□□□□ 0.13
SSNA1-203ENST00000463511 PAX4O43316 350 aa15.83■□□□□ 0.12
SSNA1-203ENST00000463511 S100A4P26447 101 aaKnown RBP15.83■□□□□ 0.12
SSNA1-203ENST00000463511 ERVFC1-1P60608 527 aa15.83■□□□□ 0.12
SSNA1-203ENST00000463511 PGPEP1Q9NXJ5 209 aa15.83■□□□□ 0.12
SSNA1-203ENST00000463511 IL36BQ9NZH7 164 aa15.83■□□□□ 0.12
SSNA1-203ENST00000463511 TNFRSF18Q9Y5U5 241 aa15.83■□□□□ 0.12
SSNA1-203ENST00000463511 EREGO14944 169 aa15.82■□□□□ 0.12
SSNA1-203ENST00000463511 IGHV3-53P01767 116 aa15.82■□□□□ 0.12
SSNA1-203ENST00000463511 ARMS2P0C7Q2 107 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms