RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 TCF21O43680 179 aa9.5□□□□□ -0.89
VAPB-203ENST00000463370 CACNG7P62955 275 aa9.5□□□□□ -0.89
VAPB-203ENST00000463370 DEFB114Q30KQ6 69 aa9.5□□□□□ -0.89
VAPB-203ENST00000463370 FOXI2Q6ZQN5 318 aa9.5□□□□□ -0.89
VAPB-203ENST00000463370 C14orf144Q96I85 54 aa9.5□□□□□ -0.89
VAPB-203ENST00000463370 TMEM70Q9BUB7 260 aa9.5□□□□□ -0.89
VAPB-203ENST00000463370 C16orf95Q9H693 158 aa9.5□□□□□ -0.89
VAPB-203ENST00000463370 PHLDA3Q9Y5J5 127 aa9.5□□□□□ -0.89
VAPB-203ENST00000463370 CCL24O00175 119 aa9.49□□□□□ -0.89
VAPB-203ENST00000463370 FAM159AQ6UWV7 190 aa9.49□□□□□ -0.89
VAPB-203ENST00000463370 ZNF418Q8TF45 676 aaPredicted RBP9.49□□□□□ -0.89
VAPB-203ENST00000463370 ODF3Q96PU9 254 aa9.49□□□□□ -0.89
VAPB-203ENST00000463370 SYS1-DBNDD2H3BUS1 97 aa9.49□□□□□ -0.89
VAPB-203ENST00000463370 LEPP41159 167 aa9.49□□□□□ -0.89
VAPB-203ENST00000463370 CDKN1BP46527 198 aa9.49□□□□□ -0.89
VAPB-203ENST00000463370 C14orf178Q8N769 122 aaPredicted RBP9.49□□□□□ -0.89
VAPB-203ENST00000463370 NRACQ8N912 160 aa9.49□□□□□ -0.89
VAPB-203ENST00000463370 DYNLRB2Q8TF09 96 aa9.49□□□□□ -0.89
VAPB-203ENST00000463370 TMEM160Q9NX00 188 aa9.49□□□□□ -0.89
VAPB-203ENST00000463370 RBMY1BA6NDE4 496 aaKnown RBP9.48□□□□□ -0.89
VAPB-203ENST00000463370 RBMY1EA6NEQ0 496 aaKnown RBP9.48□□□□□ -0.89
VAPB-203ENST00000463370 H0Y8G0 127 aa9.48□□□□□ -0.89
VAPB-203ENST00000463370 PPBPP02775 128 aa9.48□□□□□ -0.89
VAPB-203ENST00000463370 CD7P09564 240 aa9.48□□□□□ -0.89
VAPB-203ENST00000463370 RBMY1DP0C7P1 496 aaKnown RBP9.48□□□□□ -0.89
VAPB-203ENST00000463370 RBMY1A1P0DJD3 496 aaKnown RBP9.48□□□□□ -0.89
VAPB-203ENST00000463370 RBMY1CP0DJD4 496 aa9.48□□□□□ -0.89
VAPB-203ENST00000463370 RBMY1FQ15415 496 aaKnown RBP9.48□□□□□ -0.89
VAPB-203ENST00000463370 CRXO43186 299 aaPredicted RBP9.48□□□□□ -0.89
VAPB-203ENST00000463370 SMIM15Q7Z3B0 74 aa9.48□□□□□ -0.89
VAPB-203ENST00000463370 JPT2Q9H910 190 aa9.48□□□□□ -0.89
VAPB-203ENST00000463370 MDFICQ9P1T7 246 aa9.48□□□□□ -0.89
VAPB-203ENST00000463370 DEFA6Q01524 100 aa9.47□□□□□ -0.89
VAPB-203ENST00000463370 OR2K2Q8NGT1 345 aa9.47□□□□□ -0.89
VAPB-203ENST00000463370 ZNF747Q9BV97 191 aa9.47□□□□□ -0.89
VAPB-203ENST00000463370 MAP1LC3AQ9H492 121 aa9.47□□□□□ -0.89
VAPB-203ENST00000463370 TSSC4Q9Y5U2 329 aaPredicted RBP9.47□□□□□ -0.89
VAPB-203ENST00000463370 HIVEP1P15822 2718 aa9.47□□□□□ -0.89
VAPB-203ENST00000463370 H3BMM0 161 aa9.46□□□□□ -0.89
VAPB-203ENST00000463370 DUSP14O95147 198 aaKnown RBP9.46□□□□□ -0.89
VAPB-203ENST00000463370 MED14OSP0DP75 135 aa9.46□□□□□ -0.89
VAPB-203ENST00000463370 PMCHL2Q9BQD1 86 aa9.46□□□□□ -0.89
VAPB-203ENST00000463370 C20orf144Q9BQM9 153 aa9.46□□□□□ -0.89
VAPB-203ENST00000463370 MAP6D1Q9H9H5 199 aa9.46□□□□□ -0.89
VAPB-203ENST00000463370 ZNF256Q9Y2P7 627 aaPredicted RBP9.46□□□□□ -0.89
VAPB-203ENST00000463370 HLA-DRB4P13762 266 aa9.46□□□□□ -0.9
VAPB-203ENST00000463370 SPATA45Q537H7 98 aa9.46□□□□□ -0.9
VAPB-203ENST00000463370 Q8N1Y9 231 aa9.46□□□□□ -0.9
VAPB-203ENST00000463370 HLA-DRB4X5D2U9 266 aa9.46□□□□□ -0.9
VAPB-203ENST00000463370 NSD1Q96L73 2696 aaPredicted RBP9.46□□□□□ -0.9
VAPB-203ENST00000463370 IGLV2-18A0A075B6J9 118 aa9.45□□□□□ -0.9
VAPB-203ENST00000463370 IGHV3-16A0A0C4DH30 117 aa9.45□□□□□ -0.9
VAPB-203ENST00000463370 OR4C46A6NHA9 309 aa9.45□□□□□ -0.9
VAPB-203ENST00000463370 INAFM1C9JVW0 142 aa9.45□□□□□ -0.9
VAPB-203ENST00000463370 PRM2P04554 102 aa9.45□□□□□ -0.9
VAPB-203ENST00000463370 SCGB2A2Q13296 93 aa9.45□□□□□ -0.9
VAPB-203ENST00000463370 NDUFAF3Q9BU61 184 aa9.45□□□□□ -0.9
VAPB-203ENST00000463370 HSPB8Q9UJY1 196 aa9.45□□□□□ -0.9
VAPB-203ENST00000463370 LAMTOR2Q9Y2Q5 125 aa9.45□□□□□ -0.9
VAPB-203ENST00000463370 ADARB2-AS1A8MUL3 147 aa9.45□□□□□ -0.9
VAPB-203ENST00000463370 NXPH4O95158 308 aa9.45□□□□□ -0.9
VAPB-203ENST00000463370 MAP1LC3CQ9BXW4 147 aa9.45□□□□□ -0.9
VAPB-203ENST00000463370 TRAV2A0A0B4J234 112 aa9.44□□□□□ -0.9
VAPB-203ENST00000463370 PROK1P58294 105 aa9.44□□□□□ -0.9
VAPB-203ENST00000463370 KRTAP10-3P60369 221 aa9.44□□□□□ -0.9
VAPB-203ENST00000463370 CTAG1AP78358 180 aa9.44□□□□□ -0.9
VAPB-203ENST00000463370 RPL39LQ96EH5 51 aaKnown RBP9.44□□□□□ -0.9
VAPB-203ENST00000463370 MUC4Q99102 2169 aa9.44□□□□□ -0.9
VAPB-203ENST00000463370 IGHV1OR15-1A0A075B7D0 117 aa9.44□□□□□ -0.9
VAPB-203ENST00000463370 HBDP02042 147 aa9.44□□□□□ -0.9
VAPB-203ENST00000463370 MGPP08493 103 aa9.44□□□□□ -0.9
VAPB-203ENST00000463370 TSPOP30536 169 aa9.44□□□□□ -0.9
VAPB-203ENST00000463370 LINC00315P59091 139 aa9.44□□□□□ -0.9
VAPB-203ENST00000463370 RASL10AQ92737 203 aa9.44□□□□□ -0.9
VAPB-203ENST00000463370 DPH3P1Q9H4G8 78 aa9.44□□□□□ -0.9
VAPB-203ENST00000463370 KIF25-AS1Q9Y6Z4 181 aa9.44□□□□□ -0.9
VAPB-203ENST00000463370 LINC01546A6NGU7 62 aa9.43□□□□□ -0.9
VAPB-203ENST00000463370 ODF3L2Q3SX64 289 aa9.43□□□□□ -0.9
VAPB-203ENST00000463370 ZNF705AQ6ZN79 300 aaPredicted RBP9.43□□□□□ -0.9
VAPB-203ENST00000463370 C9orf85Q96MD7 179 aa9.43□□□□□ -0.9
VAPB-203ENST00000463370 A8MTW9 85 aa9.43□□□□□ -0.9
VAPB-203ENST00000463370 TCAPO15273 167 aa9.43□□□□□ -0.9
VAPB-203ENST00000463370 HTN1P15515 57 aa9.43□□□□□ -0.9
VAPB-203ENST00000463370 NSUN5P1Q3KNT7 163 aa9.43□□□□□ -0.9
VAPB-203ENST00000463370 AP1S3Q96PC3 154 aa9.43□□□□□ -0.9
VAPB-203ENST00000463370 SPAG8Q99932 426 aaPredicted RBP9.43□□□□□ -0.9
VAPB-203ENST00000463370 A0A087WWL8 130 aa9.42□□□□□ -0.9
VAPB-203ENST00000463370 NDUFA7O95182 113 aa9.42□□□□□ -0.9
VAPB-203ENST00000463370 IGLL1P15814 213 aa9.42□□□□□ -0.9
VAPB-203ENST00000463370 Q8N8P6 123 aa9.42□□□□□ -0.9
VAPB-203ENST00000463370 MRAP2Q96G30 205 aa9.42□□□□□ -0.9
VAPB-203ENST00000463370 NXT2Q9NPJ8 142 aaKnown RBP9.42□□□□□ -0.9
VAPB-203ENST00000463370 FN1P02751 2386 aaKnown RBP9.42□□□□□ -0.9
VAPB-203ENST00000463370 TRAV9-2A0A087WT02 112 aa9.42□□□□□ -0.9
VAPB-203ENST00000463370 hDV102S1A0JD36 115 aa9.42□□□□□ -0.9
VAPB-203ENST00000463370 PET117Q6UWS5 81 aa9.42□□□□□ -0.9
VAPB-203ENST00000463370 C18orf15Q96N68 181 aa9.42□□□□□ -0.9
VAPB-203ENST00000463370 MIEN1Q9BRT3 115 aa9.42□□□□□ -0.9
VAPB-203ENST00000463370 TP73-AS1Q9UF72 201 aa9.42□□□□□ -0.9
VAPB-203ENST00000463370 IGLC3P0DOY3 106 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms