RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 TP53TG3Q9ULZ0 132 aa13.46□□□□□ -0.25
VARS-221ENST00000463184 A0A087WTM6 91 aa13.45□□□□□ -0.26
VARS-221ENST00000463184 TRAV34A0A0B4J273 112 aa13.45□□□□□ -0.26
VARS-221ENST00000463184 K7EP13 123 aa13.45□□□□□ -0.26
VARS-221ENST00000463184 TAGLN2P37802 199 aaKnown RBP13.45□□□□□ -0.26
VARS-221ENST00000463184 FHL2Q14192 279 aa13.45□□□□□ -0.26
VARS-221ENST00000463184 SAPCD1Q5SSQ6 148 aa13.45□□□□□ -0.26
VARS-221ENST00000463184 Q5VSD8 79 aa13.45□□□□□ -0.26
VARS-221ENST00000463184 PRNTQ86SH4 94 aa13.45□□□□□ -0.26
VARS-221ENST00000463184 FRZBQ92765 325 aa13.45□□□□□ -0.26
VARS-221ENST00000463184 C8orf49Q96NF6 230 aa13.45□□□□□ -0.26
VARS-221ENST00000463184 MRPL16Q9NX20 251 aaKnown RBP13.45□□□□□ -0.26
VARS-221ENST00000463184 LY96Q9Y6Y9 160 aa13.45□□□□□ -0.26
VARS-221ENST00000463184 AKR1C3P42330 323 aa13.44□□□□□ -0.26
VARS-221ENST00000463184 Q6AWC8 147 aa13.44□□□□□ -0.26
VARS-221ENST00000463184 FMC1Q96HJ9 113 aa13.44□□□□□ -0.26
VARS-221ENST00000463184 BCL2P10415 239 aa13.43□□□□□ -0.26
VARS-221ENST00000463184 UBE2G1P62253 170 aa13.43□□□□□ -0.26
VARS-221ENST00000463184 TRBV6-1A0A0K0K1D8 114 aa13.42□□□□□ -0.26
VARS-221ENST00000463184 SCO2A0A1W2PP80 73 aa13.42□□□□□ -0.26
VARS-221ENST00000463184 S100A9P06702 114 aaKnown RBP13.42□□□□□ -0.26
VARS-221ENST00000463184 DNAH10OSP0CZ25 163 aa13.42□□□□□ -0.26
VARS-221ENST00000463184 KRTAP10-1P60331 282 aa13.42□□□□□ -0.26
VARS-221ENST00000463184 ZNF415Q09FC8 603 aa13.42□□□□□ -0.26
VARS-221ENST00000463184 TMEM183BQ1AE95 376 aa13.42□□□□□ -0.26
VARS-221ENST00000463184 Q6ZQT7 251 aa13.42□□□□□ -0.26
VARS-221ENST00000463184 MSRB1Q9NZV6 116 aa13.42□□□□□ -0.26
VARS-221ENST00000463184 VAX2Q9UIW0 290 aa13.42□□□□□ -0.26
VARS-221ENST00000463184 FAT1Q14517 4588 aa13.41□□□□□ -0.26
VARS-221ENST00000463184 TRGV4A0A0C4DH28 118 aa13.41□□□□□ -0.26
VARS-221ENST00000463184 EVI2AP22794 236 aa13.41□□□□□ -0.26
VARS-221ENST00000463184 SRIP30626 198 aa13.41□□□□□ -0.26
VARS-221ENST00000463184 MEF2BQ02080 365 aaPredicted RBP13.41□□□□□ -0.26
VARS-221ENST00000463184 SMUG1Q53HV7 270 aa13.41□□□□□ -0.26
VARS-221ENST00000463184 Q86TA4 180 aa13.41□□□□□ -0.26
VARS-221ENST00000463184 ZFP30Q9Y2G7 519 aa13.41□□□□□ -0.26
VARS-221ENST00000463184 DMBT1Q9UGM3 2413 aaPredicted RBP13.4□□□□□ -0.26
VARS-221ENST00000463184 TRAV21A0A0B4J279 112 aa13.4□□□□□ -0.26
VARS-221ENST00000463184 K7EQD1 137 aa13.4□□□□□ -0.26
VARS-221ENST00000463184 PDE6DO43924 150 aa13.4□□□□□ -0.26
VARS-221ENST00000463184 C11orf52Q96A22 123 aa13.4□□□□□ -0.26
VARS-221ENST00000463184 GCSHP23434 173 aa13.39□□□□□ -0.27
VARS-221ENST00000463184 PCNPQ8WW12 178 aaKnown RBP13.39□□□□□ -0.27
VARS-221ENST00000463184 RBFOX3A6NFN3 312 aa13.38□□□□□ -0.27
VARS-221ENST00000463184 GCGP01275 180 aa13.38□□□□□ -0.27
VARS-221ENST00000463184 LTAP01374 205 aa13.38□□□□□ -0.27
VARS-221ENST00000463184 ORM1P02763 201 aa13.38□□□□□ -0.27
VARS-221ENST00000463184 COX8CQ7Z4L0 72 aa13.38□□□□□ -0.27
VARS-221ENST00000463184 WFDC10BQ8IUB3 73 aa13.38□□□□□ -0.27
VARS-221ENST00000463184 RASL10AQ92737 203 aa13.38□□□□□ -0.27
VARS-221ENST00000463184 VPS13BQ7Z7G8 4022 aa13.37□□□□□ -0.27
VARS-221ENST00000463184 SFTA3P0C7M3 94 aa13.37□□□□□ -0.27
VARS-221ENST00000463184 GYPEP15421 78 aa13.37□□□□□ -0.27
VARS-221ENST00000463184 ZNF80P51504 273 aaPredicted RBP13.37□□□□□ -0.27
VARS-221ENST00000463184 FAM159AQ6UWV7 190 aa13.37□□□□□ -0.27
VARS-221ENST00000463184 C10orf126Q8N4M7 172 aa13.37□□□□□ -0.27
VARS-221ENST00000463184 ZNF479Q96JC4 524 aa13.37□□□□□ -0.27
VARS-221ENST00000463184 SPXQ9BT56 116 aa13.37□□□□□ -0.27
VARS-221ENST00000463184 MDFICQ9P1T7 246 aa13.37□□□□□ -0.27
VARS-221ENST00000463184 PFN1P07737 140 aaKnown RBP13.36□□□□□ -0.27
VARS-221ENST00000463184 ZNF506Q5JVG8 444 aa13.36□□□□□ -0.27
VARS-221ENST00000463184 MUC21Q5SSG8 566 aa13.36□□□□□ -0.27
VARS-221ENST00000463184 BAGE2Q86Y30 109 aa13.36□□□□□ -0.27
VARS-221ENST00000463184 MED9Q9NWA0 146 aa13.36□□□□□ -0.27
VARS-221ENST00000463184 SMR3BP02814 79 aaPredicted RBP13.35□□□□□ -0.27
VARS-221ENST00000463184 RPL35P42766 123 aaKnown RBP13.35□□□□□ -0.27
VARS-221ENST00000463184 TDRG1Q3Y452 100 aa13.35□□□□□ -0.27
VARS-221ENST00000463184 TMEM183AQ8IXX5 376 aa13.35□□□□□ -0.27
VARS-221ENST00000463184 FAM210AQ96ND0 272 aa13.35□□□□□ -0.27
VARS-221ENST00000463184 FABP5P3A8MUU1 101 aa13.34□□□□□ -0.27
VARS-221ENST00000463184 C9JCJ5 164 aa13.34□□□□□ -0.27
VARS-221ENST00000463184 FAM229AH3BQW9 127 aa13.34□□□□□ -0.27
VARS-221ENST00000463184 CRYGDP07320 174 aa13.34□□□□□ -0.27
VARS-221ENST00000463184 ZC2HC1AQ96GY0 325 aa13.34□□□□□ -0.27
VARS-221ENST00000463184 KCNS1Q96KK3 526 aa13.34□□□□□ -0.27
VARS-221ENST00000463184 DERL1Q9BUN8 251 aa13.34□□□□□ -0.27
VARS-221ENST00000463184 EIF5A2Q9GZV4 153 aaKnown RBP13.34□□□□□ -0.27
VARS-221ENST00000463184 NAGKQ9UJ70 344 aa13.34□□□□□ -0.27
VARS-221ENST00000463184 TRGV11A0A075B6L2 103 aa13.33□□□□□ -0.28
VARS-221ENST00000463184 NDUFS6O75380 124 aaKnown RBP13.33□□□□□ -0.28
VARS-221ENST00000463184 TOR2AQ5JU69 321 aa13.33□□□□□ -0.28
VARS-221ENST00000463184 TRAV4A0A0B4J268 109 aa13.32□□□□□ -0.28
VARS-221ENST00000463184 TMEM250H0YL14 139 aa13.32□□□□□ -0.28
VARS-221ENST00000463184 SH2D6Q7Z4S9 175 aa13.32□□□□□ -0.28
VARS-221ENST00000463184 MLST8Q9BVC4 326 aa13.32□□□□□ -0.28
VARS-221ENST00000463184 SDF2L1Q9HCN8 221 aa13.32□□□□□ -0.28
VARS-221ENST00000463184 CRIP1P50238 77 aa13.31□□□□□ -0.28
VARS-221ENST00000463184 RAB14P61106 215 aa13.31□□□□□ -0.28
VARS-221ENST00000463184 ZNF674Q2M3X9 581 aa13.31□□□□□ -0.28
VARS-221ENST00000463184 FAM162BQ5T6X4 162 aa13.31□□□□□ -0.28
VARS-221ENST00000463184 NHLRC2Q8NBF2 726 aa13.31□□□□□ -0.28
VARS-221ENST00000463184 NTN5Q8WTR8 489 aaPredicted RBP13.31□□□□□ -0.28
VARS-221ENST00000463184 TMEM70Q9BUB7 260 aa13.31□□□□□ -0.28
VARS-221ENST00000463184 C11orf21Q9P2W6 132 aa13.31□□□□□ -0.28
VARS-221ENST00000463184 MYCBP2O75592 4640 aa13.3□□□□□ -0.28
VARS-221ENST00000463184 IGLV5-52A0A0A0MRZ9 124 aa13.3□□□□□ -0.28
VARS-221ENST00000463184 RAB19A4D1S5 217 aa13.3□□□□□ -0.28
VARS-221ENST00000463184 GNRH2O43555 120 aa13.3□□□□□ -0.28
VARS-221ENST00000463184 PSCAO43653 123 aa13.3□□□□□ -0.28
VARS-221ENST00000463184 CENPWQ5EE01 88 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms