RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 UBE2L5PA0A1B0GUS4 154 aa4.87□□□□□ -1.63
SMC3-202ENST00000462899 DIRC3C9JPN6 131 aa4.87□□□□□ -1.63
SMC3-202ENST00000462899 SCGB1D2O95969 90 aa4.87□□□□□ -1.63
SMC3-202ENST00000462899 ZNF506Q5JVG8 444 aa4.87□□□□□ -1.63
SMC3-202ENST00000462899 DGAT2L7PQ6IED9 249 aa4.87□□□□□ -1.63
SMC3-202ENST00000462899 MIR17HGQ75NE6 70 aa4.87□□□□□ -1.63
SMC3-202ENST00000462899 TOMM5Q8N4H5 51 aa4.87□□□□□ -1.63
SMC3-202ENST00000462899 OR10G9Q8NGN4 311 aa4.87□□□□□ -1.63
SMC3-202ENST00000462899 SLIRPQ9GZT3 109 aaKnown RBP4.87□□□□□ -1.63
SMC3-202ENST00000462899 SH3BGRL3Q9H299 93 aa4.87□□□□□ -1.63
SMC3-202ENST00000462899 GPN1Q9HCN4 374 aaPredicted RBP4.87□□□□□ -1.63
SMC3-202ENST00000462899 C11orf21Q9P2W6 132 aa4.87□□□□□ -1.63
SMC3-202ENST00000462899 NAGKQ9UJ70 344 aa4.87□□□□□ -1.63
SMC3-202ENST00000462899 A0A087WWC5 75 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 TRAV21A0A0B4J279 112 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 GAGE12JA6NER3 117 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 PGPEP1LA6NFU8 196 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 USP17L23D6RBM5 183 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 CST7O76096 145 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 SEC11BP0C7V7 166 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 RNASE3P12724 160 aaKnown RBP4.86□□□□□ -1.63
SMC3-202ENST00000462899 AP3S2P59780 193 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 BAXQ07812 192 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 GAGE1Q13065 139 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 GAGE4Q13068 117 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 GAGE5Q13069 117 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 KRTAP26-1Q6PEX3 210 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 ENHOQ6UWT2 76 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 ZFP2Q6ZN57 461 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 UBE2WQ96B02 151 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 KCNS1Q96KK3 526 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 C2orf50Q96LR7 162 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 NPCDR1Q9BY65 106 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 SAMD10Q9BYL1 202 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 C20orf85Q9H1P6 137 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 PARLQ9H300 379 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 SDF2L1Q9HCN8 221 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 V9GYH0 126 aa4.86□□□□□ -1.63
SMC3-202ENST00000462899 IGSF23A1L1A6 192 aa4.85□□□□□ -1.63
SMC3-202ENST00000462899 FAM24AA6NFZ4 105 aa4.85□□□□□ -1.63
SMC3-202ENST00000462899 F6UZH7 168 aa4.85□□□□□ -1.63
SMC3-202ENST00000462899 NDUFB6O95139 128 aa4.85□□□□□ -1.63
SMC3-202ENST00000462899 FGF7P21781 194 aa4.85□□□□□ -1.63
SMC3-202ENST00000462899 RPL19P84098 196 aaKnown RBP4.85□□□□□ -1.63
SMC3-202ENST00000462899 Q0VG73 95 aa4.85□□□□□ -1.63
SMC3-202ENST00000462899 HSD17B11Q8NBQ5 300 aa4.85□□□□□ -1.63
SMC3-202ENST00000462899 ASB13Q8WXK3 278 aa4.85□□□□□ -1.63
SMC3-202ENST00000462899 ATP5SQ99766 215 aa4.85□□□□□ -1.63
SMC3-202ENST00000462899 LYRM2Q9NU23 88 aaPredicted RBP4.85□□□□□ -1.63
SMC3-202ENST00000462899 FLVCR2Q9UPI3 526 aa4.85□□□□□ -1.63
SMC3-202ENST00000462899 A0A087WYN8 130 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 PHOX2AO14813 284 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 S100A11P31949 105 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 BTCP35070 178 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 CSN1S1P47710 185 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 SULT1A1P50225 295 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 ZNF80P51504 273 aaPredicted RBP4.84□□□□□ -1.63
SMC3-202ENST00000462899 CNBPP62633 177 aaKnown RBP4.84□□□□□ -1.63
SMC3-202ENST00000462899 RANP62826 216 aaKnown RBP4.84□□□□□ -1.63
SMC3-202ENST00000462899 FFAR4Q5NUL3 377 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 PIK3CD-AS1Q5SR53 167 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 WDR73Q6P4I2 378 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 C14orf178Q8N769 122 aaPredicted RBP4.84□□□□□ -1.63
SMC3-202ENST00000462899 SPACA4Q8TDM5 124 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 MITD1Q8WV92 249 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 RNF185Q96GF1 192 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 C1orf43Q9BWL3 253 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 GSKIPQ9P0R6 139 aa4.84□□□□□ -1.63
SMC3-202ENST00000462899 PRR3P79522 188 aaKnown RBP4.83□□□□□ -1.64
SMC3-202ENST00000462899 IL15RAQ13261 267 aa4.83□□□□□ -1.64
SMC3-202ENST00000462899 ELOBQ15370 118 aa4.83□□□□□ -1.64
SMC3-202ENST00000462899 TMEM252Q8N6L7 170 aa4.83□□□□□ -1.64
SMC3-202ENST00000462899 ARL6IP6Q8N6S5 226 aa4.83□□□□□ -1.64
SMC3-202ENST00000462899 TMEM75Q8N9X5 138 aa4.83□□□□□ -1.64
SMC3-202ENST00000462899 OR10G7Q8NGN6 311 aa4.83□□□□□ -1.64
SMC3-202ENST00000462899 ZC2HC1AQ96GY0 325 aa4.83□□□□□ -1.64
SMC3-202ENST00000462899 PLAC8Q9NZF1 115 aa4.83□□□□□ -1.64
SMC3-202ENST00000462899 KIF25-AS1Q9Y6Z4 181 aa4.83□□□□□ -1.64
SMC3-202ENST00000462899 URGCP-MRPS24S4R325 110 aa4.83□□□□□ -1.64
SMC3-202ENST00000462899 A8MWV9 139 aa4.82□□□□□ -1.64
SMC3-202ENST00000462899 L7N2F9 121 aa4.82□□□□□ -1.64
SMC3-202ENST00000462899 CCSO14618 274 aa4.82□□□□□ -1.64
SMC3-202ENST00000462899 CHTF8P0CG12 524 aa4.82□□□□□ -1.64
SMC3-202ENST00000462899 FGF8P55075 233 aaPredicted RBP4.82□□□□□ -1.64
SMC3-202ENST00000462899 VAMP2P63027 116 aa4.82□□□□□ -1.64
SMC3-202ENST00000462899 ATP6V1FQ16864 119 aa4.82□□□□□ -1.64
SMC3-202ENST00000462899 JPT2Q9H910 190 aa4.82□□□□□ -1.64
SMC3-202ENST00000462899 TREM1Q9NP99 234 aa4.82□□□□□ -1.64
SMC3-202ENST00000462899 LSM5Q9Y4Y9 91 aaKnown RBP4.82□□□□□ -1.64
SMC3-202ENST00000462899 A0A087WX48 190 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 OR7C2O60412 319 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 HLA-DQA1P01909 254 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 BCAP31P51572 246 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 UBE2L3P68036 154 aaKnown RBP4.81□□□□□ -1.64
SMC3-202ENST00000462899 HBG1P69891 147 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 HBG2P69892 147 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 MPV17L2Q567V2 206 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 PYDC2Q56P42 97 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 SPANXN2Q5MJ10 180 aa4.81□□□□□ -1.64
SMC3-202ENST00000462899 GOLT1AQ6ZVE7 132 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms