RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 UBE2D3P61077 147 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 LMO4P61968 165 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 UBE2D2P62837 147 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 FOXI1Q12951 378 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 ZNF56Q15929 161 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 NSUN5P1Q3KNT7 163 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 SUMO4Q6EEV6 95 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 UNQ9165/PRO28630Q6UXU0 137 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 ZFP2Q6ZN57 461 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 Q6ZQT7 251 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 LCNL1Q6ZST4 164 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 TEN1Q86WV5 123 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 NDUFA11Q86Y39 141 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 ZNF418Q8TF45 676 aaPredicted RBP2.65□□□□□ -1.99
COL8A1-204ENST00000462604 PLEKHB2Q96CS7 222 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 ODF3Q96PU9 254 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 PIMREGQ9BSJ6 248 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 RHPN1-AS1Q9BWJ2 59 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 BPESC1Q9GZL8 116 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 DAZ1Q9NQZ3 744 aaKnown RBP2.65□□□□□ -1.99
COL8A1-204ENST00000462604 KIF25-AS1Q9Y6Z4 181 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 DNAJC13O75165 2243 aa2.65□□□□□ -1.99
COL8A1-204ENST00000462604 MED13Q9UHV7 2174 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 SPENQ96T58 3664 aaKnown RBP2.64□□□□□ -1.99
COL8A1-204ENST00000462604 FAM186AA6NE01 2351 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 IGKV3-7A0A075B6H7 116 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 TRGV11A0A075B6L2 103 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 IGHV3OR16-10A0A075B7F0 116 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 A0A0B4J2C4 111 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 TRBV27A0A0K0K1C4 114 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 A6NDX4 124 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 SDHAF1A6NFY7 115 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 KLLNB2CW77 178 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 TMEM262E9PQX1 116 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 F6UB75 175 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 J3QQQ9 107 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 K7EMT4 169 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 M0QXV9 152 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 LGALS9O00182 355 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 SPRY2O43597 315 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 TSHBP01222 138 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 IGHV3-11P01762 117 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 IGHV3-30P01768 117 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 IGHG2P01859 326 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 CD7P09564 240 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 SPINK8P0C7L1 97 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 ZNF688P0C7X2 276 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 CFC1BP0CG36 223 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 CFC1P0CG37 223 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 IGHV3-30-5P0DP03 117 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 INSL3P51460 131 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 POLR2KP53803 58 aaKnown RBP2.64□□□□□ -1.99
COL8A1-204ENST00000462604 EMP1P54849 157 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 TIRAPP58753 221 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 TSPEAR-AS2P59090 65 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 LINC00315P59091 139 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 SNRPD3P62318 126 aaKnown RBP2.64□□□□□ -1.99
COL8A1-204ENST00000462604 CDSNQ15517 529 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 LY6EQ16553 131 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 ZNF876PQ49A33 203 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 TRPT1Q86TN4 253 aaKnown RBP2.64□□□□□ -1.99
COL8A1-204ENST00000462604 NFE4Q86UQ8 179 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 LINC00528Q8N1L1 170 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 C10orf126Q8N4M7 172 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 SLC25A29Q8N8R3 303 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 KLHL30-AS1Q8NEE0 82 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 BEX4Q9NWD9 120 aaPredicted RBP2.64□□□□□ -1.99
COL8A1-204ENST00000462604 PRO1854Q9UHT4 67 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 LINC00527Q9UJ94 153 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 ERG28Q9UKR5 140 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 ZNF256Q9Y2P7 627 aaPredicted RBP2.64□□□□□ -1.99
COL8A1-204ENST00000462604 DYSFO75923 2080 aa2.64□□□□□ -1.99
COL8A1-204ENST00000462604 TRAV2A0A0B4J234 112 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 TRAV12-3A0A0B4J271 114 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 IGHV3-16A0A0C4DH30 117 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 A0A0J9YX75 114 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 TMEM223A0PJW6 202 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 H3BUX3 64 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 I3L3M4 83 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 TCL1BO95988 128 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 TGFAP01135 160 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 IGLV1-40P01703 118 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 CRYGDP07320 174 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 SMCPP49901 116 aaPredicted RBP2.63□□□□□ -1.99
COL8A1-204ENST00000462604 DEFB1P60022 68 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 RPL39P62891 51 aaKnown RBP2.63□□□□□ -1.99
COL8A1-204ENST00000462604 ATXN8Q156A1 80 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 Q1RN00 199 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 FAM74A4Q5TZK3 123 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 SFTA2Q6UW10 78 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 BRD3OSQ6XYD6 125 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 Q6ZS46 218 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 Q6ZUT4 128 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 SBSPONQ8IVN8 264 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 ANKRD29Q8N6D5 301 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 ZNRF2Q8NHG8 242 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 C9orf85Q96MD7 179 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 GEMIN7Q9H840 131 aaKnown RBP2.63□□□□□ -1.99
COL8A1-204ENST00000462604 MDFICQ9P1T7 246 aa2.63□□□□□ -1.99
COL8A1-204ENST00000462604 NCOR1O75376 2440 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms