RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 SFTA2Q6UW10 78 aa13.95□□□□□ -0.18
HPS3-204ENST00000462030 DEFB104AQ8WTQ1 72 aa13.95□□□□□ -0.18
HPS3-204ENST00000462030 LINC01549A6NIU2 74 aa13.95□□□□□ -0.18
HPS3-204ENST00000462030 GNRH2O43555 120 aa13.95□□□□□ -0.18
HPS3-204ENST00000462030 SCGB1D4Q6XE38 83 aa13.95□□□□□ -0.18
HPS3-204ENST00000462030 KLHL30-AS1Q8NEE0 82 aa13.95□□□□□ -0.18
HPS3-204ENST00000462030 LINC00477Q96M19 166 aa13.95□□□□□ -0.18
HPS3-204ENST00000462030 F6UB75 175 aa13.94□□□□□ -0.18
HPS3-204ENST00000462030 DUSP14O95147 198 aaKnown RBP13.94□□□□□ -0.18
HPS3-204ENST00000462030 COX6B1P14854 86 aa13.94□□□□□ -0.18
HPS3-204ENST00000462030 OR10J6PQ8NGY7 276 aa13.94□□□□□ -0.18
HPS3-204ENST00000462030 NDUFS8O00217 210 aa13.93□□□□□ -0.18
HPS3-204ENST00000462030 RNASE4P34096 147 aaKnown RBP13.93□□□□□ -0.18
HPS3-204ENST00000462030 MUC4Q99102 2169 aa13.93□□□□□ -0.18
HPS3-204ENST00000462030 CRYGDP07320 174 aa13.93□□□□□ -0.18
HPS3-204ENST00000462030 ARL3P36405 182 aa13.93□□□□□ -0.18
HPS3-204ENST00000462030 SMCPP49901 116 aaPredicted RBP13.93□□□□□ -0.18
HPS3-204ENST00000462030 EMP1P54849 157 aa13.93□□□□□ -0.18
HPS3-204ENST00000462030 TRAV41A0A0B4J266 112 aa13.92□□□□□ -0.18
HPS3-204ENST00000462030 SOCS3O14543 225 aa13.92□□□□□ -0.18
HPS3-204ENST00000462030 APOMO95445 188 aa13.92□□□□□ -0.18
HPS3-204ENST00000462030 RNASE3P12724 160 aaKnown RBP13.92□□□□□ -0.18
HPS3-204ENST00000462030 CLEC2AQ6UVW9 174 aa13.92□□□□□ -0.18
HPS3-204ENST00000462030 UBE2D1P51668 147 aa13.92□□□□□ -0.18
HPS3-204ENST00000462030 SRSF9Q13242 221 aaKnown RBP eCLIP13.92□□□□□ -0.18
HPS3-204ENST00000462030 CFAP126Q5VTH2 177 aa13.92□□□□□ -0.18
HPS3-204ENST00000462030 ATRXP46100 2492 aa13.92□□□□□ -0.18
HPS3-204ENST00000462030 NPFFO15130 113 aa13.91□□□□□ -0.18
HPS3-204ENST00000462030 TSPAN13O95857 204 aa13.91□□□□□ -0.18
HPS3-204ENST00000462030 TSHBP01222 138 aa13.91□□□□□ -0.18
HPS3-204ENST00000462030 IGKV3-7A0A075B6H7 116 aa13.91□□□□□ -0.18
HPS3-204ENST00000462030 C11orf86A6NJI1 115 aa13.91□□□□□ -0.18
HPS3-204ENST00000462030 IGF2RP11717 2491 aa13.91□□□□□ -0.18
HPS3-204ENST00000462030 OVOL1O14753 267 aa13.9□□□□□ -0.18
HPS3-204ENST00000462030 DLX4Q92988 240 aaPredicted RBP13.9□□□□□ -0.18
HPS3-204ENST00000462030 IGLV4-69A0A075B6H9 119 aa13.9□□□□□ -0.18
HPS3-204ENST00000462030 IGHV3OR16-10A0A075B7F0 116 aa13.9□□□□□ -0.18
HPS3-204ENST00000462030 TMEM238LA0A1B0GVL6 79 aa13.9□□□□□ -0.18
HPS3-204ENST00000462030 A6NJY4 79 aa13.9□□□□□ -0.18
HPS3-204ENST00000462030 NBL1P41271 181 aa13.9□□□□□ -0.18
HPS3-204ENST00000462030 C19orf54Q5BKX5 351 aa13.9□□□□□ -0.18
HPS3-204ENST00000462030 ZFP2Q6ZN57 461 aa13.9□□□□□ -0.18
HPS3-204ENST00000462030 LOC107984156A0A0G2JMH3 177 aa13.89□□□□□ -0.19
HPS3-204ENST00000462030 PSMB2P49721 201 aa13.89□□□□□ -0.19
HPS3-204ENST00000462030 FOXI1Q12951 378 aa13.89□□□□□ -0.19
HPS3-204ENST00000462030 ARL17AQ8IVW1 177 aa13.89□□□□□ -0.19
HPS3-204ENST00000462030 FAM19A4Q96LR4 140 aa13.89□□□□□ -0.19
HPS3-204ENST00000462030 C1QTNF4Q9BXJ3 329 aa13.89□□□□□ -0.19
HPS3-204ENST00000462030 FAM223BA6NKX1 122 aa13.89□□□□□ -0.19
HPS3-204ENST00000462030 RPL11P62913 178 aaKnown RBP13.89□□□□□ -0.19
HPS3-204ENST00000462030 FAM223AQ8IWN6 122 aa13.89□□□□□ -0.19
HPS3-204ENST00000462030 TP53TG1Q9Y2A0 90 aa13.89□□□□□ -0.19
HPS3-204ENST00000462030 AKAP6Q13023 2319 aa13.89□□□□□ -0.19
HPS3-204ENST00000462030 CD7P09564 240 aa13.88□□□□□ -0.19
HPS3-204ENST00000462030 MED14OSP0DP75 135 aa13.88□□□□□ -0.19
HPS3-204ENST00000462030 NFE4Q86UQ8 179 aa13.88□□□□□ -0.19
HPS3-204ENST00000462030 ATP6V0BQ99437 205 aa13.88□□□□□ -0.19
HPS3-204ENST00000462030 JPT2Q9H910 190 aa13.88□□□□□ -0.19
HPS3-204ENST00000462030 LINC00315P59091 139 aa13.87□□□□□ -0.19
HPS3-204ENST00000462030 LMO4P61968 165 aa13.87□□□□□ -0.19
HPS3-204ENST00000462030 RPL39P62891 51 aaKnown RBP13.87□□□□□ -0.19
HPS3-204ENST00000462030 BPESC1Q9GZL8 116 aa13.87□□□□□ -0.19
HPS3-204ENST00000462030 MOB4Q9Y3A3 225 aa13.87□□□□□ -0.19
HPS3-204ENST00000462030 KIF25-AS1Q9Y6Z4 181 aa13.87□□□□□ -0.19
HPS3-204ENST00000462030 ZNF418Q8TF45 676 aaPredicted RBP13.87□□□□□ -0.19
HPS3-204ENST00000462030 CELSR1Q9NYQ6 3014 aa13.86□□□□□ -0.19
HPS3-204ENST00000462030 A0A0J9YY99 117 aa13.86□□□□□ -0.19
HPS3-204ENST00000462030 IGHV3-11P01762 117 aa13.86□□□□□ -0.19
HPS3-204ENST00000462030 Q6ZS46 218 aa13.86□□□□□ -0.19
HPS3-204ENST00000462030 SYT8Q8NBV8 401 aa13.86□□□□□ -0.19
HPS3-204ENST00000462030 PTH2Q96A98 100 aa13.86□□□□□ -0.19
HPS3-204ENST00000462030 IGIPA6NJ69 53 aa13.86□□□□□ -0.19
HPS3-204ENST00000462030 NDUFA4O00483 81 aa13.86□□□□□ -0.19
HPS3-204ENST00000462030 TSPEAR-AS2P59090 65 aa13.86□□□□□ -0.19
HPS3-204ENST00000462030 UBE2D3P61077 147 aa13.86□□□□□ -0.19
HPS3-204ENST00000462030 UBE2D2P62837 147 aa13.86□□□□□ -0.19
HPS3-204ENST00000462030 POM121L12Q8N7R1 296 aa13.86□□□□□ -0.19
HPS3-204ENST00000462030 A0A1B0GV72 72 aa13.85□□□□□ -0.19
HPS3-204ENST00000462030 APRG1Q8IVJ8 170 aa13.85□□□□□ -0.19
HPS3-204ENST00000462030 UBTD1Q9HAC8 227 aa13.85□□□□□ -0.19
HPS3-204ENST00000462030 COL6A6A6NMZ7 2263 aa13.85□□□□□ -0.19
HPS3-204ENST00000462030 PPP1R17O96001 155 aa13.85□□□□□ -0.19
HPS3-204ENST00000462030 NDUFA11Q86Y39 141 aa13.85□□□□□ -0.19
HPS3-204ENST00000462030 ATP6V0E2Q8NHE4 81 aa13.85□□□□□ -0.19
HPS3-204ENST00000462030 NXPH4O95158 308 aa13.84□□□□□ -0.19
HPS3-204ENST00000462030 FHL3Q13643 280 aa13.84□□□□□ -0.19
HPS3-204ENST00000462030 CDIP1Q9H305 208 aa13.84□□□□□ -0.19
HPS3-204ENST00000462030 IGHV1-69DA0A0B4J2H0 117 aa13.84□□□□□ -0.19
HPS3-204ENST00000462030 SUMO4Q6EEV6 95 aa13.84□□□□□ -0.19
HPS3-204ENST00000462030 A0A087WWL8 130 aa13.83□□□□□ -0.2
HPS3-204ENST00000462030 SRD5A1P18405 259 aa13.83□□□□□ -0.2
HPS3-204ENST00000462030 POLR2KP53803 58 aaKnown RBP13.83□□□□□ -0.2
HPS3-204ENST00000462030 HERVK_113P61574 105 aa13.83□□□□□ -0.2
HPS3-204ENST00000462030 PMVKQ15126 192 aa13.83□□□□□ -0.2
HPS3-204ENST00000462030 WFDC12Q8WWY7 111 aa13.83□□□□□ -0.2
HPS3-204ENST00000462030 BRD3OSQ6XYD6 125 aa13.83□□□□□ -0.2
HPS3-204ENST00000462030 IGHV4OR15-8A0A075B7B6 117 aa13.82□□□□□ -0.2
HPS3-204ENST00000462030 A0A087WW49 117 aa13.82□□□□□ -0.2
HPS3-204ENST00000462030 TCL1BO95988 128 aa13.82□□□□□ -0.2
HPS3-204ENST00000462030 CRIP2P52943 208 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms