RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 KIF25-AS1Q9Y6Z4 181 aa11.36□□□□□ -0.59
C9orf78-204ENST00000461762 IGHV3-11P01762 117 aa11.36□□□□□ -0.59
C9orf78-204ENST00000461762 ZNF479Q96JC4 524 aa11.36□□□□□ -0.59
C9orf78-204ENST00000461762 PRORYQ9H606 182 aa11.36□□□□□ -0.59
C9orf78-204ENST00000461762 MGPP08493 103 aa11.35□□□□□ -0.59
C9orf78-204ENST00000461762 RHPN1-AS1Q9BWJ2 59 aa11.35□□□□□ -0.59
C9orf78-204ENST00000461762 ZFHX3Q15911 3703 aa11.35□□□□□ -0.59
C9orf78-204ENST00000461762 A6NDX4 124 aa11.35□□□□□ -0.59
C9orf78-204ENST00000461762 RPL11P62913 178 aaKnown RBP11.35□□□□□ -0.59
C9orf78-204ENST00000461762 IGHV4OR15-8A0A075B7B6 117 aa11.34□□□□□ -0.59
C9orf78-204ENST00000461762 A0A087WW49 117 aa11.34□□□□□ -0.59
C9orf78-204ENST00000461762 TEX48A0A1B0GUV7 120 aa11.34□□□□□ -0.59
C9orf78-204ENST00000461762 F8W1H4 67 aa11.34□□□□□ -0.59
C9orf78-204ENST00000461762 LGALS1P09382 135 aaKnown RBP11.34□□□□□ -0.59
C9orf78-204ENST00000461762 RPL32P62910 135 aaKnown RBP11.34□□□□□ -0.59
C9orf78-204ENST00000461762 RPL24P83731 157 aaKnown RBP11.34□□□□□ -0.59
C9orf78-204ENST00000461762 LY6DQ14210 128 aa11.34□□□□□ -0.59
C9orf78-204ENST00000461762 IGHV4-61A0A0C4DH41 118 aa11.34□□□□□ -0.59
C9orf78-204ENST00000461762 IGHV4-38-2P0DP08 117 aa11.34□□□□□ -0.59
C9orf78-204ENST00000461762 LY6EQ16553 131 aa11.34□□□□□ -0.59
C9orf78-204ENST00000461762 RRN3P1Q2M238 152 aa11.34□□□□□ -0.59
C9orf78-204ENST00000461762 SPTBN1Q01082 2364 aaKnown RBP11.34□□□□□ -0.59
C9orf78-204ENST00000461762 KLLNB2CW77 178 aa11.33□□□□□ -0.6
C9orf78-204ENST00000461762 IGLV1-40P01703 118 aa11.33□□□□□ -0.6
C9orf78-204ENST00000461762 CRYGDP07320 174 aa11.33□□□□□ -0.6
C9orf78-204ENST00000461762 BLCAPP62952 87 aa11.33□□□□□ -0.6
C9orf78-204ENST00000461762 Q6ZS46 218 aa11.33□□□□□ -0.6
C9orf78-204ENST00000461762 PRADC1Q9BSG0 188 aa11.33□□□□□ -0.6
C9orf78-204ENST00000461762 PF4V1P10720 104 aa11.32□□□□□ -0.6
C9orf78-204ENST00000461762 COX6B1P14854 86 aa11.32□□□□□ -0.6
C9orf78-204ENST00000461762 WFDC2Q14508 124 aa11.32□□□□□ -0.6
C9orf78-204ENST00000461762 COL6A6A6NMZ7 2263 aa11.32□□□□□ -0.6
C9orf78-204ENST00000461762 IGKV3-7A0A075B6H7 116 aa11.32□□□□□ -0.6
C9orf78-204ENST00000461762 H3BUX3 64 aa11.32□□□□□ -0.6
C9orf78-204ENST00000461762 TSHBP01222 138 aa11.32□□□□□ -0.6
C9orf78-204ENST00000461762 POLR2KP53803 58 aaKnown RBP11.32□□□□□ -0.6
C9orf78-204ENST00000461762 DAZ1Q9NQZ3 744 aaKnown RBP11.32□□□□□ -0.6
C9orf78-204ENST00000461762 SPANXB1Q9NS25 103 aaPredicted RBP11.32□□□□□ -0.6
C9orf78-204ENST00000461762 CYSLTR1Q9Y271 337 aa11.32□□□□□ -0.6
C9orf78-204ENST00000461762 DUSP14O95147 198 aaKnown RBP11.31□□□□□ -0.6
C9orf78-204ENST00000461762 LCNL1Q6ZST4 164 aa11.31□□□□□ -0.6
C9orf78-204ENST00000461762 HIVEP3Q5T1R4 2406 aa11.31□□□□□ -0.6
C9orf78-204ENST00000461762 IGIPA6NJ69 53 aa11.31□□□□□ -0.6
C9orf78-204ENST00000461762 H3BMG7 143 aa11.31□□□□□ -0.6
C9orf78-204ENST00000461762 K7EMT4 169 aa11.3□□□□□ -0.6
C9orf78-204ENST00000461762 CFHR3Q02985 330 aa11.3□□□□□ -0.6
C9orf78-204ENST00000461762 MORN3Q6PF18 240 aaPredicted RBP11.3□□□□□ -0.6
C9orf78-204ENST00000461762 PIMREGQ9BSJ6 248 aa11.3□□□□□ -0.6
C9orf78-204ENST00000461762 IGLV4-69A0A075B6H9 119 aa11.3□□□□□ -0.6
C9orf78-204ENST00000461762 HOXA3O43365 443 aaPredicted RBP11.3□□□□□ -0.6
C9orf78-204ENST00000461762 C10orf105Q8TEF2 133 aa11.3□□□□□ -0.6
C9orf78-204ENST00000461762 JPT2Q9H910 190 aa11.3□□□□□ -0.6
C9orf78-204ENST00000461762 PRO0461Q9UI25 63 aa11.3□□□□□ -0.6
C9orf78-204ENST00000461762 LINC01549A6NIU2 74 aa11.29□□□□□ -0.6
C9orf78-204ENST00000461762 ZNF815PA8K554 130 aa11.29□□□□□ -0.6
C9orf78-204ENST00000461762 SRD5A1P18405 259 aa11.29□□□□□ -0.6
C9orf78-204ENST00000461762 EDN2P20800 178 aa11.29□□□□□ -0.6
C9orf78-204ENST00000461762 AMTNQ6UX39 209 aa11.29□□□□□ -0.6
C9orf78-204ENST00000461762 ZFP2Q6ZN57 461 aa11.29□□□□□ -0.6
C9orf78-204ENST00000461762 DCANP1Q8TF63 244 aa11.29□□□□□ -0.6
C9orf78-204ENST00000461762 AGRNO00468 2067 aa11.29□□□□□ -0.6
C9orf78-204ENST00000461762 ABCA2Q9BZC7 2435 aa11.28□□□□□ -0.6
C9orf78-204ENST00000461762 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
C9orf78-204ENST00000461762 FAM159AQ6UWV7 190 aa11.28□□□□□ -0.6
C9orf78-204ENST00000461762 PLEKHB2Q96CS7 222 aa11.28□□□□□ -0.6
C9orf78-204ENST00000461762 C11orf86A6NJI1 115 aa11.28□□□□□ -0.6
C9orf78-204ENST00000461762 VCYO14598 125 aa11.28□□□□□ -0.6
C9orf78-204ENST00000461762 GNLYP22749 145 aa11.28□□□□□ -0.6
C9orf78-204ENST00000461762 TP53TG1Q9Y2A0 90 aa11.28□□□□□ -0.6
C9orf78-204ENST00000461762 TMEM238C9JI98 176 aa11.27□□□□□ -0.6
C9orf78-204ENST00000461762 ID1P41134 155 aa11.27□□□□□ -0.6
C9orf78-204ENST00000461762 AKAP6Q13023 2319 aa11.27□□□□□ -0.61
C9orf78-204ENST00000461762 GAGE13Q4V321 117 aa11.27□□□□□ -0.61
C9orf78-204ENST00000461762 PAPPA-AS1Q5QFB9 102 aa11.27□□□□□ -0.61
C9orf78-204ENST00000461762 KLHL30-AS1Q8NEE0 82 aa11.27□□□□□ -0.61
C9orf78-204ENST00000461762 TMEM141Q96I45 108 aa11.27□□□□□ -0.61
C9orf78-204ENST00000461762 MUC4Q99102 2169 aa11.27□□□□□ -0.61
C9orf78-204ENST00000461762 NDUFS8O00217 210 aa11.26□□□□□ -0.61
C9orf78-204ENST00000461762 UBE2D1P51668 147 aa11.26□□□□□ -0.61
C9orf78-204ENST00000461762 PMVKQ15126 192 aa11.26□□□□□ -0.61
C9orf78-204ENST00000461762 CD300EQ496F6 205 aaPredicted RBP11.26□□□□□ -0.61
C9orf78-204ENST00000461762 SH2D6Q7Z4S9 175 aa11.26□□□□□ -0.61
C9orf78-204ENST00000461762 VPS13CQ709C8 3753 aa11.26□□□□□ -0.61
C9orf78-204ENST00000461762 SCGB2A2Q13296 93 aa11.26□□□□□ -0.61
C9orf78-204ENST00000461762 SAMD13Q5VXD3 122 aa11.26□□□□□ -0.61
C9orf78-204ENST00000461762 TIMM17AQ99595 171 aa11.26□□□□□ -0.61
C9orf78-204ENST00000461762 A0A087WWL8 130 aa11.25□□□□□ -0.61
C9orf78-204ENST00000461762 TRBV6-5A0A0K0K1A5 114 aa11.25□□□□□ -0.61
C9orf78-204ENST00000461762 TRBV27A0A0K0K1C4 114 aa11.25□□□□□ -0.61
C9orf78-204ENST00000461762 LGALS9O00182 355 aa11.25□□□□□ -0.61
C9orf78-204ENST00000461762 ETDBQ3ZM63 59 aa11.25□□□□□ -0.61
C9orf78-204ENST00000461762 WFDC12Q8WWY7 111 aa11.25□□□□□ -0.61
C9orf78-204ENST00000461762 CELSR1Q9NYQ6 3014 aa11.25□□□□□ -0.61
C9orf78-204ENST00000461762 TRAV12-3A0A0B4J271 114 aa11.25□□□□□ -0.61
C9orf78-204ENST00000461762 CD7P09564 240 aa11.25□□□□□ -0.61
C9orf78-204ENST00000461762 RPL39P62891 51 aaKnown RBP11.25□□□□□ -0.61
C9orf78-204ENST00000461762 SCGB1D4Q6XE38 83 aa11.25□□□□□ -0.61
C9orf78-204ENST00000461762 KIR2DL4Q99706 377 aa11.25□□□□□ -0.61
C9orf78-204ENST00000461762 PGPEP1Q9NXJ5 209 aa11.25□□□□□ -0.61
C9orf78-204ENST00000461762 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms