RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 TAAR5O14804 337 aa5.87□□□□□ -1.47
HDAC9-220ENST00000461409 EIF3GO75821 320 aaKnown RBP eCLIP5.87□□□□□ -1.47
HDAC9-220ENST00000461409 MBP02144 154 aa5.87□□□□□ -1.47
HDAC9-220ENST00000461409 SLPIP03973 132 aa5.87□□□□□ -1.47
HDAC9-220ENST00000461409 GATA1P15976 413 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-220ENST00000461409 CDC34P49427 236 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-220ENST00000461409 ZNF876PQ49A33 203 aa5.87□□□□□ -1.47
HDAC9-220ENST00000461409 ZFP69Q49AA0 526 aa5.87□□□□□ -1.47
HDAC9-220ENST00000461409 OR2G3Q8NGZ4 309 aa5.87□□□□□ -1.47
HDAC9-220ENST00000461409 TVP23CQ96ET8 276 aa5.87□□□□□ -1.47
HDAC9-220ENST00000461409 PRADC1Q9BSG0 188 aa5.87□□□□□ -1.47
HDAC9-220ENST00000461409 HMGB3O15347 200 aaKnown RBP5.86□□□□□ -1.47
HDAC9-220ENST00000461409 PSCAO43653 123 aa5.86□□□□□ -1.47
HDAC9-220ENST00000461409 TCRAP04437 139 aa5.86□□□□□ -1.47
HDAC9-220ENST00000461409 STAG3L2P0CL84 134 aa5.86□□□□□ -1.47
HDAC9-220ENST00000461409 STAG3L3P0CL85 134 aa5.86□□□□□ -1.47
HDAC9-220ENST00000461409 FUSP35637 526 aaKnown RBP eCLIP5.86□□□□□ -1.47
HDAC9-220ENST00000461409 GNG5P63218 68 aa5.86□□□□□ -1.47
HDAC9-220ENST00000461409 RHOHQ15669 191 aa5.86□□□□□ -1.47
HDAC9-220ENST00000461409 LINC01556Q5JQF7 62 aa5.86□□□□□ -1.47
HDAC9-220ENST00000461409 FRZBQ92765 325 aa5.86□□□□□ -1.47
HDAC9-220ENST00000461409 RAB24Q969Q5 203 aa5.86□□□□□ -1.47
HDAC9-220ENST00000461409 PSMG3Q9BT73 122 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-220ENST00000461409 TMEM167BQ9NRX6 74 aa5.86□□□□□ -1.47
HDAC9-220ENST00000461409 DMBT1Q9UGM3 2413 aaPredicted RBP5.85□□□□□ -1.47
HDAC9-220ENST00000461409 LOC100131303A0A0U1RQF7 123 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 TRBV6-4A0A1B0GX49 114 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 CXorf1O96002 111 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 GCGP01275 180 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 MGST1P10620 155 aaKnown RBP5.85□□□□□ -1.47
HDAC9-220ENST00000461409 GCSHP23434 173 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 GCHFRP30047 84 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 KRTAP10-1P60331 282 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 SERF2P84101 59 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 SMUG1Q53HV7 270 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 OR10J3Q5JRS4 329 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 SAPCD1Q5SSQ6 148 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 CFAP126Q5VTH2 177 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 CYB561D1Q8N8Q1 229 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 SLC25A29Q8N8R3 303 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 HSD17B11Q8NBQ5 300 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 SUN5Q8TC36 379 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 NTN5Q8WTR8 489 aaPredicted RBP5.85□□□□□ -1.47
HDAC9-220ENST00000461409 PTH2Q96A98 100 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 AQP10Q96PS8 301 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 SH3BGRL3Q9H299 93 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 PSG8Q9UQ74 426 aa5.85□□□□□ -1.47
HDAC9-220ENST00000461409 SRRM2Q9UQ35 2752 aaKnown RBP5.84□□□□□ -1.47
HDAC9-220ENST00000461409 IBA57-AS1B1ANH7 110 aa5.84□□□□□ -1.47
HDAC9-220ENST00000461409 RS1O15537 224 aa5.84□□□□□ -1.47
HDAC9-220ENST00000461409 XGP55808 180 aa5.84□□□□□ -1.47
HDAC9-220ENST00000461409 FLI1Q01543 452 aaPredicted RBP5.84□□□□□ -1.47
HDAC9-220ENST00000461409 LAGE3Q14657 143 aa5.84□□□□□ -1.47
HDAC9-220ENST00000461409 LELP1Q5T871 98 aa5.84□□□□□ -1.47
HDAC9-220ENST00000461409 TMEM75Q8N9X5 138 aa5.84□□□□□ -1.47
HDAC9-220ENST00000461409 SGK494Q96LW2 274 aa5.84□□□□□ -1.47
HDAC9-220ENST00000461409 C9orf85Q96MD7 179 aa5.84□□□□□ -1.47
HDAC9-220ENST00000461409 ACTR3CQ9C0K3 210 aaPredicted RBP5.84□□□□□ -1.47
HDAC9-220ENST00000461409 EPDR1Q9UM22 224 aa5.84□□□□□ -1.47
HDAC9-220ENST00000461409 ALG5Q9Y673 324 aa5.84□□□□□ -1.47
HDAC9-220ENST00000461409 IGLV5-52A0A0A0MRZ9 124 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 A0A1W2PRE2 83 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 GGTLC3B5MD39 225 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 IGLV2-11P01706 119 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 INAFM2P0DMQ5 153 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 ATP6V0CP27449 155 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 ZNF80P51504 273 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-220ENST00000461409 ZNF506Q5JVG8 444 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 PIK3CD-AS1Q5SR53 167 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 Q5VSD8 79 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 PRNTQ86SH4 94 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 ATP6V0E2Q8NHE4 81 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 TMEM70Q9BUB7 260 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 GTSF1LQ9H1H1 148 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 MED28Q9H204 178 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 C11orf21Q9P2W6 132 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 TNFSF18Q9UNG2 199 aa5.83□□□□□ -1.48
HDAC9-220ENST00000461409 BORCS7-ASMTA0A0B4J1R7 106 aa5.82□□□□□ -1.48
HDAC9-220ENST00000461409 IGHV3-73A0A0B4J1V6 119 aa5.82□□□□□ -1.48
HDAC9-220ENST00000461409 LRCOL1A6NCL2 159 aa5.82□□□□□ -1.48
HDAC9-220ENST00000461409 A8MWV9 139 aa5.82□□□□□ -1.48
HDAC9-220ENST00000461409 PTTG1O95997 202 aa5.82□□□□□ -1.48
HDAC9-220ENST00000461409 IFNA7P01567 189 aa5.82□□□□□ -1.48
HDAC9-220ENST00000461409 S100A4P26447 101 aaKnown RBP5.82□□□□□ -1.48
HDAC9-220ENST00000461409 DPPA3Q6W0C5 159 aa5.82□□□□□ -1.48
HDAC9-220ENST00000461409 ZFP2Q6ZN57 461 aa5.82□□□□□ -1.48
HDAC9-220ENST00000461409 Q8N814 137 aa5.82□□□□□ -1.48
HDAC9-220ENST00000461409 INO80EQ8NBZ0 244 aaPredicted RBP5.82□□□□□ -1.48
HDAC9-220ENST00000461409 TM2D2Q9BX73 214 aa5.82□□□□□ -1.48
HDAC9-220ENST00000461409 NKX6-2Q9C056 277 aaPredicted RBP5.82□□□□□ -1.48
HDAC9-220ENST00000461409 Q9HAA7 133 aa5.82□□□□□ -1.48
HDAC9-220ENST00000461409 A0A087WWC5 75 aa5.81□□□□□ -1.48
HDAC9-220ENST00000461409 PGPEP1LA6NFU8 196 aa5.81□□□□□ -1.48
HDAC9-220ENST00000461409 FABP5P3A8MUU1 101 aa5.81□□□□□ -1.48
HDAC9-220ENST00000461409 IGHV3-30P01768 117 aa5.81□□□□□ -1.48
HDAC9-220ENST00000461409 IGHV3-33P01772 117 aa5.81□□□□□ -1.48
HDAC9-220ENST00000461409 IGHV3-30-3P0DP02 117 aa5.81□□□□□ -1.48
HDAC9-220ENST00000461409 IGHV3-30-5P0DP03 117 aa5.81□□□□□ -1.48
HDAC9-220ENST00000461409 RNASE3P12724 160 aaKnown RBP5.81□□□□□ -1.48
HDAC9-220ENST00000461409 ASIPP42127 132 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms