RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ERGIC3Q9Y282 383 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 RBM7Q9Y580 266 aaKnown RBP1.51□□□□□ -2.17
CLK1-206ENST00000461326 ABCA2Q9BZC7 2435 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 F8P00451 2351 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 RTTNQ86VV8 2226 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 ACANP16112 2415 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 CMYA5Q8N3K9 4069 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 MALRD1Q5VYJ5 2156 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 TRBV20OR9-2A0A075B6H5 130 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 IGKV1-9A0A0C4DH69 117 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 PQLC2LA1A4F0 135 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 ZNF705FA8MVS1 300 aaPredicted RBP1.5□□□□□ -2.17
CLK1-206ENST00000461326 INMT-MINDY4F8WBC2 141 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 H3BT86 120 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 NDUFB3O43676 98 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 NDUFA2O43678 99 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 SULT1B1O43704 296 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 HAND1O96004 215 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 PRM2P04554 102 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 CD2P06729 351 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 SULT1A3P0DMM9 295 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 SULT1A4P0DMN0 295 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 PIPP12273 146 aaPredicted RBP1.5□□□□□ -2.17
CLK1-206ENST00000461326 RPL28P46779 137 aaKnown RBP1.5□□□□□ -2.17
CLK1-206ENST00000461326 RBP2P50120 134 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 EDDM3BP56851 147 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 ARF6P62330 175 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 PPP3R1P63098 170 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 CCL20P78556 96 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 PRB3Q04118 309 aaPredicted RBP1.5□□□□□ -2.17
CLK1-206ENST00000461326 KLRD1Q13241 179 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 EDDM3AQ14507 147 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 INSL4Q14641 139 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 CDK5R1Q15078 307 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 KISS1Q15726 138 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 TPRXLQ17RH7 258 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 SMIM21Q3B7S5 101 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 CCDC58Q4VC31 144 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 IBA57Q5T440 356 aaKnown RBP1.5□□□□□ -2.17
CLK1-206ENST00000461326 SLC25A26Q70HW3 274 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 VMO1Q7Z5L0 202 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 TRAPPC6BQ86SZ2 158 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 Q8IYB0 196 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 TMEM86BQ8N661 226 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 TEX29Q8N6K0 151 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 SIGLECL1Q8N7X8 197 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 OR51A2Q8NGJ7 313 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 OR5D14Q8NGL3 314 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 ZNF418Q8TF45 676 aaPredicted RBP1.5□□□□□ -2.17
CLK1-206ENST00000461326 PP6455Q8WZ26 134 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 TMEM106AQ96A25 262 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 CEP19Q96LK0 163 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 S100A13Q99584 98 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 PARD6GQ9BYG4 376 aaPredicted RBP1.5□□□□□ -2.17
CLK1-206ENST00000461326 COMMD5Q9GZQ3 224 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 TLNRD1Q9H1K6 362 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 Q9H521 79 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 RASL12Q9NYN1 266 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 KAAG1Q9UBP8 84 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 CKLFQ9UBR5 152 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 FUT9Q9Y231 359 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 TPRKBQ9Y3C4 175 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 SOX21Q9Y651 276 aaPredicted RBP1.5□□□□□ -2.17
CLK1-206ENST00000461326 DOCK11Q5JSL3 2073 aa1.5□□□□□ -2.17
CLK1-206ENST00000461326 TENM1Q9UKZ4 2725 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 TGIF2-C20orf24A0A0A6YYL0 155 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 H0YJX3 145 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 DEGS1O15121 323 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 SLC22A1O15245 554 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 OR2H2O95918 312 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 CCL3L1P16619 93 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 ZNF93P35789 620 aaPredicted RBP1.49□□□□□ -2.17
CLK1-206ENST00000461326 GNG10P50151 68 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 FXYD2P54710 66 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 CAV3P56539 151 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 RPS25P62851 125 aaKnown RBP1.49□□□□□ -2.17
CLK1-206ENST00000461326 NEDD8Q15843 81 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 GUK1Q16774 197 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 LTC4SQ16873 150 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 DEFB112Q30KQ8 113 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 PIGYQ3MUY2 71 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 HSD17B12Q53GQ0 312 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 GLIPR1L1Q6UWM5 242 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 OR4S1Q8NGB4 309 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 OR51D1Q8NGF3 324 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 NEK7Q8TDX7 302 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 ITFG2Q969R8 447 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 TMEM203Q969S6 136 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 BANF2Q9H503 90 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 TMEM138Q9NPI0 162 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 C19orf12Q9NSK7 152 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 IL36BQ9NZH7 164 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 DOK5Q9P104 306 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 NAT8Q9UHE5 227 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.49□□□□□ -2.172e-8■■■■□ 25.2
CLK1-206ENST00000461326 ABCA1O95477 2261 aa1.49□□□□□ -2.17
CLK1-206ENST00000461326 FN1P02751 2386 aaKnown RBP1.48□□□□□ -2.17
CLK1-206ENST00000461326 TRGV10A0A0A0MS01 117 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 hADV38S2A0JD32 116 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 FUOMA2VDF0 154 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms