RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 TMEM242Q9NWH2 141 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 PTPRGP23470 1445 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 SMG6Q86US8 1419 aaKnown RBP0.77□□□□□ -2.29
SYPL1-203ENST00000460770 WDR7Q9Y4E6 1490 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
SYPL1-203ENST00000460770 KIAA0100Q14667 2235 aaKnown RBP0.77□□□□□ -2.29
SYPL1-203ENST00000460770 DLG5Q8TDM6 1919 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.76□□□□□ -2.29
SYPL1-203ENST00000460770 KDM5CP41229 1560 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 FGD6Q6ZV73 1430 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 NCOA3Q9Y6Q9 1424 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 IGKV3-7A0A075B6H7 116 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 IGKV2-40A0A087WW87 121 aaPredicted RBP0.76□□□□□ -2.29
SYPL1-203ENST00000460770 HCRTO43612 131 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 PPYP01298 95 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 IGKV2D-40P01614 121 aaPredicted RBP0.76□□□□□ -2.29
SYPL1-203ENST00000460770 IGHV3-33P01772 117 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 IGKCP01834 107 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 IL9P15248 144 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 PPP3R1P63098 170 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 Q56UQ5 140 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 S100A7L2Q5SY68 101 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 SPANXN1Q5VSR9 72 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 KRTAP26-1Q6PEX3 210 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 UNQ6190/PRO20217Q6UXQ8 127 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 VSTM2AQ8TAG5 236 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 PPDPFLQ8WWR9 84 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 PPP3R2Q96LZ3 170 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 SNRNP25Q9BV90 132 aaKnown RBP0.76□□□□□ -2.29
SYPL1-203ENST00000460770 AGPAT4-IT1Q9H0P7 198 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 ATG5Q9H1Y0 275 aa0.76□□□□□ -2.29
SYPL1-203ENST00000460770 MRPL36Q9P0J6 103 aaKnown RBP0.76□□□□□ -2.29
SYPL1-203ENST00000460770 KIAA1549LQ6ZVL6 1849 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 USP54Q70EL1 1684 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 COL1A1P02452 1464 aaPredicted RBP0.75□□□□□ -2.29
SYPL1-203ENST00000460770 PRG4Q92954 1404 aaPredicted RBP0.75□□□□□ -2.29
SYPL1-203ENST00000460770 TRAV2A0A0B4J234 112 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 LOC100130705A0A1B0GUX0 176 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 IGKV2-29A2NJV5 120 aaPredicted RBP0.75□□□□□ -2.29
SYPL1-203ENST00000460770 FAM24AA6NFZ4 105 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 MCRIP1C9JLW8 97 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 JMJD7-PLA2G4BH0Y9G9 81 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 CCDC179H3BU77 68 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 INE1O15225 51 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 TFF1P04155 84 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 GYPBP06028 91 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 SLC25A6P12236 298 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 RBP2P50120 134 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 UBE2G1P62253 170 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 CATR1Q13166 79 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 SPATA45Q537H7 98 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 SPRNQ5BIV9 151 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 GDF5OSQ5U4N7 250 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 LYPD5Q6UWN5 251 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 LINC00299Q6ZSB3 139 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 TMEM141Q96I45 108 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 MRPL57Q9BQC6 102 aaKnown RBP0.75□□□□□ -2.29
SYPL1-203ENST00000460770 CYSTM1Q9H1C7 97 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 RPRMQ9NS64 109 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 NDUFA12Q9UI09 145 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 SERP1Q9Y6X1 66 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 PLXNA2O75051 1894 aa0.75□□□□□ -2.29
SYPL1-203ENST00000460770 RP1L1Q8IWN7 2480 aaPredicted RBP0.75□□□□□ -2.29
SYPL1-203ENST00000460770 BICRAQ9NZM4 1560 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 ARHGAP31Q2M1Z3 1444 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 KTN1Q86UP2 1357 aaKnown RBP0.74□□□□□ -2.29
SYPL1-203ENST00000460770 TMEM2Q9UHN6 1383 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 LOC110117498A0A087WWA1 95 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 TCRBV3S1A0A5B6 114 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 TMEM218A2RU14 115 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 A6NN06 94 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 M0R2N4 97 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 IFNA17P01571 189 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 CCKP06307 115 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 IFITM1P13164 125 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 CBLN1P23435 193 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 BTG2P78543 158 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 C9orf153Q5TBE3 101 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 CSAG1Q6PB30 78 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 LINC00322Q6ZN03 302 aaPredicted RBP0.74□□□□□ -2.29
SYPL1-203ENST00000460770 C8orf59Q8N0T1 100 aaPredicted RBP0.74□□□□□ -2.29
SYPL1-203ENST00000460770 SPTSSBQ8NFR3 76 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 TSKUQ8WUA8 353 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 PPP1R1CQ8WVI7 109 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 DMAC1Q96GE9 116 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 C14orf144Q96I85 54 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 OBSCN-AS1Q96MR7 158 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 LIMD2Q9BT23 127 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 MRPL35Q9NZE8 188 aaKnown RBP0.74□□□□□ -2.29
SYPL1-203ENST00000460770 IER3IP1Q9Y5U9 82 aa0.74□□□□□ -2.29
SYPL1-203ENST00000460770 CECR2Q9BXF3 1484 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 ABCA4P78363 2273 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 SPEF2Q9C093 1822 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 COL4A1P02462 1669 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 A0A0J9YY99 117 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 TRBV10-1A0A0K0K1A3 114 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 HIGD1CA8MV81 97 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 M0R143 59 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 TNFP01375 233 aa0.73□□□□□ -2.29
SYPL1-203ENST00000460770 S100A8P05109 93 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms