RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 KCNS1Q96KK3 526 aa12.8□□□□□ -0.36
CDK11A-209ENST00000460465 TMEM191AQ9H0A3 160 aa12.8□□□□□ -0.36
CDK11A-209ENST00000460465 OR11H12B2RN74 326 aa12.79□□□□□ -0.36
CDK11A-209ENST00000460465 CACNG7P62955 275 aa12.79□□□□□ -0.36
CDK11A-209ENST00000460465 SPANXN1Q5VSR9 72 aa12.79□□□□□ -0.36
CDK11A-209ENST00000460465 IGHV4-4A0A075B6R2 117 aa12.79□□□□□ -0.36
CDK11A-209ENST00000460465 SPRY2O43597 315 aa12.79□□□□□ -0.36
CDK11A-209ENST00000460465 MED14OSP0DP75 135 aa12.79□□□□□ -0.36
CDK11A-209ENST00000460465 ESDP10768 282 aa12.79□□□□□ -0.36
CDK11A-209ENST00000460465 RNASE3P12724 160 aaKnown RBP12.79□□□□□ -0.36
CDK11A-209ENST00000460465 CRXO43186 299 aaPredicted RBP12.78□□□□□ -0.36
CDK11A-209ENST00000460465 CD7P09564 240 aa12.78□□□□□ -0.36
CDK11A-209ENST00000460465 TDRG1Q3Y452 100 aa12.78□□□□□ -0.36
CDK11A-209ENST00000460465 PACRGQ96M98 296 aaPredicted RBP12.78□□□□□ -0.36
CDK11A-209ENST00000460465 MRPL51Q4U2R6 128 aaKnown RBP12.78□□□□□ -0.36
CDK11A-209ENST00000460465 TMEM18Q96B42 140 aa12.78□□□□□ -0.36
CDK11A-209ENST00000460465 SCRT2Q9NQ03 307 aa12.78□□□□□ -0.36
CDK11A-209ENST00000460465 RBMY1A1P0DJD3 496 aaKnown RBP12.77□□□□□ -0.36
CDK11A-209ENST00000460465 RBMY1CP0DJD4 496 aa12.77□□□□□ -0.36
CDK11A-209ENST00000460465 RBMY1FQ15415 496 aaKnown RBP12.77□□□□□ -0.36
CDK11A-209ENST00000460465 DMRTA1Q5VZB9 504 aa12.77□□□□□ -0.36
CDK11A-209ENST00000460465 CHTOPQ9Y3Y2 248 aaKnown RBP12.77□□□□□ -0.36
CDK11A-209ENST00000460465 IGHV1OR15-1A0A075B7D0 117 aa12.77□□□□□ -0.37
CDK11A-209ENST00000460465 A0A1B0GV90 55 aa12.77□□□□□ -0.37
CDK11A-209ENST00000460465 PRO1933Q9H354 126 aa12.77□□□□□ -0.37
CDK11A-209ENST00000460465 PHLDA3Q9Y5J5 127 aa12.77□□□□□ -0.37
CDK11A-209ENST00000460465 D6R8Y8 96 aa12.76□□□□□ -0.37
CDK11A-209ENST00000460465 M0R381 172 aa12.76□□□□□ -0.37
CDK11A-209ENST00000460465 BEAN1Q3B7T3 259 aa12.76□□□□□ -0.37
CDK11A-209ENST00000460465 STHQ8IWL8 128 aa12.76□□□□□ -0.37
CDK11A-209ENST00000460465 RNF185Q96GF1 192 aa12.76□□□□□ -0.37
CDK11A-209ENST00000460465 EVI2AP22794 236 aa12.76□□□□□ -0.37
CDK11A-209ENST00000460465 CMC4P56277 68 aaPredicted RBP12.76□□□□□ -0.37
CDK11A-209ENST00000460465 PKIAP61925 76 aa12.76□□□□□ -0.37
CDK11A-209ENST00000460465 SPATA3Q8NHX4 192 aa12.76□□□□□ -0.37
CDK11A-209ENST00000460465 CLUHP3Q96NS8 147 aa12.76□□□□□ -0.37
CDK11A-209ENST00000460465 U3KQK5 164 aa12.76□□□□□ -0.37
CDK11A-209ENST00000460465 RAB4AP20338 218 aa12.75□□□□□ -0.37
CDK11A-209ENST00000460465 DDTP30046 118 aa12.74□□□□□ -0.37
CDK11A-209ENST00000460465 SMIM15Q7Z3B0 74 aa12.74□□□□□ -0.37
CDK11A-209ENST00000460465 Q8N1Y9 231 aa12.74□□□□□ -0.37
CDK11A-209ENST00000460465 IGHV3-16A0A0C4DH30 117 aa12.74□□□□□ -0.37
CDK11A-209ENST00000460465 LBHQ53QV2 105 aaPredicted RBP12.74□□□□□ -0.37
CDK11A-209ENST00000460465 TRPT1Q86TN4 253 aaKnown RBP12.74□□□□□ -0.37
CDK11A-209ENST00000460465 ORMDL3Q8N138 153 aa12.74□□□□□ -0.37
CDK11A-209ENST00000460465 MUC4Q99102 2169 aa12.74□□□□□ -0.37
CDK11A-209ENST00000460465 TSTD3H0UI37 97 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 SMKR1H3BMG3 65 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 KRTAP24-1Q3LI83 254 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 RNASEKQ6P5S7 137 aaKnown RBP12.73□□□□□ -0.37
CDK11A-209ENST00000460465 NIT1Q86X76 327 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 URB1-AS1Q96HZ7 61 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 PRELID3AQ96N28 172 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 SAMD10Q9BYL1 202 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 NCR2O95944 276 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 CKS2P33552 79 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 COTL1Q14019 142 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 FAM110AQ9BQ89 295 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 WFDC10AQ9H1F0 79 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 C19orf73Q9NVV2 129 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 MDFICQ9P1T7 246 aa12.73□□□□□ -0.37
CDK11A-209ENST00000460465 NXPH4O95158 308 aa12.72□□□□□ -0.37
CDK11A-209ENST00000460465 PMCHP20382 165 aa12.72□□□□□ -0.37
CDK11A-209ENST00000460465 C9orf85Q96MD7 179 aa12.72□□□□□ -0.37
CDK11A-209ENST00000460465 CBY3A6NI87 242 aa12.71□□□□□ -0.37
CDK11A-209ENST00000460465 TRGV11A0A075B6L2 103 aa12.71□□□□□ -0.38
CDK11A-209ENST00000460465 INSP01308 110 aa12.71□□□□□ -0.38
CDK11A-209ENST00000460465 AMTP48728 403 aa12.71□□□□□ -0.38
CDK11A-209ENST00000460465 C9orf66Q5T8R8 295 aa12.71□□□□□ -0.38
CDK11A-209ENST00000460465 NIPBLQ6KC79 2804 aaeCLIP12.7□□□□□ -0.385e-6■■■□□ 16
CDK11A-209ENST00000460465 HSBP1O75506 76 aa12.7□□□□□ -0.38
CDK11A-209ENST00000460465 GAS8-AS1O95177 125 aa12.7□□□□□ -0.38
CDK11A-209ENST00000460465 NPYP01303 97 aa12.7□□□□□ -0.38
CDK11A-209ENST00000460465 FAM19A2Q8N3H0 131 aa12.7□□□□□ -0.38
CDK11A-209ENST00000460465 XCL2Q9UBD3 114 aa12.7□□□□□ -0.38
CDK11A-209ENST00000460465 HTN1P15515 57 aa12.7□□□□□ -0.38
CDK11A-209ENST00000460465 INSL3P51460 131 aa12.7□□□□□ -0.38
CDK11A-209ENST00000460465 PPBPP02775 128 aa12.69□□□□□ -0.38
CDK11A-209ENST00000460465 C14orf178Q8N769 122 aaPredicted RBP12.69□□□□□ -0.38
CDK11A-209ENST00000460465 AP1S3Q96PC3 154 aa12.69□□□□□ -0.38
CDK11A-209ENST00000460465 C20orf144Q9BQM9 153 aa12.69□□□□□ -0.38
CDK11A-209ENST00000460465 TENM1Q9UKZ4 2725 aa12.69□□□□□ -0.38
CDK11A-209ENST00000460465 LINC00614P0C842 121 aa12.68□□□□□ -0.38
CDK11A-209ENST00000460465 CHCHD1Q96BP2 118 aaKnown RBP12.68□□□□□ -0.38
CDK11A-209ENST00000460465 C2orf88Q9BSF0 95 aa12.68□□□□□ -0.38
CDK11A-209ENST00000460465 DPH3P1Q9H4G8 78 aa12.68□□□□□ -0.38
CDK11A-209ENST00000460465 PRM2P04554 102 aa12.68□□□□□ -0.38
CDK11A-209ENST00000460465 TRAV26-2A0A0B4J265 109 aa12.67□□□□□ -0.38
CDK11A-209ENST00000460465 LOC389332A0A1B0GUA5 103 aa12.67□□□□□ -0.38
CDK11A-209ENST00000460465 GATA1P15976 413 aaPredicted RBP12.67□□□□□ -0.38
CDK11A-209ENST00000460465 NUTF2P61970 127 aaKnown RBP12.67□□□□□ -0.38
CDK11A-209ENST00000460465 JOSD1Q15040 202 aaPredicted RBP12.67□□□□□ -0.38
CDK11A-209ENST00000460465 LINC01587Q99440 93 aa12.67□□□□□ -0.38
CDK11A-209ENST00000460465 Q6ZWC4 215 aa12.67□□□□□ -0.38
CDK11A-209ENST00000460465 PRSS3P2Q8NHM4 247 aa12.67□□□□□ -0.38
CDK11A-209ENST00000460465 TEP1Q99973 2627 aaKnown RBP12.66□□□□□ -0.38
CDK11A-209ENST00000460465 IFI27P40305 119 aaPredicted RBP12.66□□□□□ -0.38
CDK11A-209ENST00000460465 PRIMA1Q86XR5 153 aa12.66□□□□□ -0.38
CDK11A-209ENST00000460465 JMJD1CQ15652 2540 aa12.66□□□□□ -0.38
CDK11A-209ENST00000460465 TNFRSF6BO95407 300 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms